Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0717200 |
| Transcript ID | LotjaGi1g1v0717200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | senescence-associated-like protein (DUF581); TAIR: AT3G63210.1 mediator of aba-regulated dormancy protein (DUF581); Swiss-Prot: sp|Q8LGS1|MARD1_ARATH Protein MARD1; TrEMBL-Plants: tr|A0A0S3RY04|A0A0S3RY04_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0717200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128544890..128547492) extracted from Lotus japonicus Gifu genome v1.2.
TTATCCTCCATTTAAACACTTAACTGGCATATGAATCCAAACACGTTTCTCTCTCTCTCCCACAACTCAAAGCTTCTTTC CTTTTCTTCTTTGCTTGATTGCTCAATGCCTCTATAAACAGTTGCATACTTTGGAAGGTTAGAACTTAGAACAGAAACGA AAAACAGAATAAATTAGTGATAGGATGGAAGAGGGTGAAGTTGCACTTCCTTGGTAACAAAAACCAAACCAAGCAAAGTA GTTCAATTTTGAAGTGGAATACCAAAACTGATTACATCTCTTTTTGAACGCCAACAGTGCATAGCAGATCAAGTTTCAAT GGCAAAGCTGCTACTAATCACATGTCTTTCTTTACTTTTTCTGATTCAAGAGAATTGAAAAAGGACCAGGTGCCAAATTC ATTTTATCTGAAAGTTTCAGAGAGATTCTCTCTGTTAGATCAGGAAAAAGGACCTTGCTTCTGAATCACAAAAGTGTTTA TGAAAATAGCAACCTGCATCTACCAGAGTGGTTTGTTTGAAATACCACTTTTCTAGTCTATAGCTATTTTGGGTGAGTCT TTACTTTTTACTCCCTCATCATGTTTATTCTTCTGCATCATTTGTAGTTGTAGTATTCACTATTTTTTCCTAGTCAGTTT CAACACAGATTAAACAACACTTATTGAAATTTATCTACTAGAAAAAATACCAAATAAACTTCAGCATGTGTTCTTTGGTA GGCATCTAAGCAGACTCTAATTACTCATTTGGTTTACCTGCTAATTTTTCTTTTGGGATCACAGAAGCTAGAGGGTCCTT ATGCTGCTGAGGAACAGATCAAGGGCAGTGACCAAGCCACCTTTGATGGCTGATCACAGTTCCAACCCTTCTCCCAATCA AAATTGTGCTAAAACCATTCCATCTCTATTTGGCTCACCAAAGTTTAGAGACTTCACCAACAAGTGTCTCTCTGCAGGAA CTGATGCTTTGAGAAGCCCAACTTCAATTCTTGACACCAGATCCTTTATACCCTCTTTTGGTTTTGGAAATCCATTCTCA CATGACAAAAGTACCCAAACTTTTCCCCTCAAAACCTCAGAAACCAGAAGCTCCATGGTCTCAAAAGGCATTGGCCTTGC TCTTGTGGGTGATTTCAAAGATGAGCTAGTTGATGAGAAAAATTCTGCTGAACCCATCAAAGGAAGTGTCTTTCTTGGAA AGCAGCTCAGAGTGAAAATCCCACCCCTGGAATATCCTTCATCATTCTCTCCATCCAAATCTCAAACTCATGGTGGTCAT GATTTTGGAACCAAAACCAAGGCCTCACAACAAAACACTGCAACTCAGGATTCTCCAAGTGTAGTTGTTACCAGTGTTCT GTCTCTGAGTGAGATGGAGCTTTCTGAGGAATACACATGTGTGATATCCCATGGACCTACCCCAAGAACCACCCACATAT TCAACAATTCCATTGTGGAGAGTTACTATTCTCTGCCCCCAGACTCTCCCTCTTCTTCTTCTTCTGTGAACTTCCTCAGC TTCTGTTACACTTGCAAGAAACATCTTGAGCAGACAAAAGACATCTTTATTTATGGGTGAGTACCTTTTCCTAGTTCCTA CCTTTGCAATTTGCATTGTGGATATTTGAGACTTCCTAAAGCACAAGACAACAAAAAAACTTTGAAGTACTCCATGTTCT GTTTATCACTATCCCAATTTGGACACTATTTTTTATTCTTTTCAATATGTGTAAGTTGTTAACTAGTGAGATTTCTTTAT TTTGCAGAGGAGAGAAAGCTTTCTGCAGTAGAGAATGCCGCCACAGAGAAATGGTGTTAGATGGTGTAGAATGTTTAGAT TTTGAAATTAATGACTATTTTTGACGTCAGTGTCCCTTCACTTGCGTGCTTTACATGCACCATGGCTGCAACGTACGTTT GCATTTTGATGAGGATAATAACCAGAAACGCAGAAAGTCAAATCAAAGTTTTCCATTCTTGGTTATGATATCATGACTTT GTAGAATATTTCGTTGTAATCAGTATGGTCTTTTTTGTATTTTTTCTCTTTTTGAAGTCTATTTTGTTTTTAGTATGTTT GGATCAGCTTGTTTTTCGTTTTTGATTGCGGTCCACAACGGCAGTTGCAGTCGCAAAGTAATTGAGTTTGGAGTCCCCAT ATTAGCATTGCAACCGCAATTAGAGTTGATGCAGTCGCATTTGTCGCGAGCTTTTTCCTATAATTGACTCTGGCTGTTCC AAACTTGTAACTTTTTTTTCTCCTCTTCCCTGCAAATAGAGATAAGAGAGGATGTAGAGTTCATTATTCCAAGTGATGAC TACAAATTTGATTGCTTCTGGTTTTGGTCCCCATTGTTTTCGGGTGAAGTGAGTGTGATTGAAAGGAGTGCTTTTCTTTT TTTCTTTCTTCTCTGAGTTGATGATAATGATGGTGTTGCTTATTGGTGTAGATGGGGACCGGTTAATTATTTCTCATCAA AGATTCCCTCACTGCATCATGTACTCTATTATTATCCTTGGCCTTGCTCGGTTGAGAAAAGAATTCAGCAAAATCATTAT AATACTCTAAAAACTGATAATGACAGAAAAATATACATTTGTT
CDS sequence (LotjaGi1g1v0717200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCTGAGGAACAGATCAAGGGCAGTGACCAAGCCACCTTTGATGGCTGATCACAGTTCCAACCCTTCTCCCAATCA AAATTGTGCTAAAACCATTCCATCTCTATTTGGCTCACCAAAGTTTAGAGACTTCACCAACAAGTGTCTCTCTGCAGGAA CTGATGCTTTGAGAAGCCCAACTTCAATTCTTGACACCAGATCCTTTATACCCTCTTTTGGTTTTGGAAATCCATTCTCA CATGACAAAAGTACCCAAACTTTTCCCCTCAAAACCTCAGAAACCAGAAGCTCCATGGTCTCAAAAGGCATTGGCCTTGC TCTTGTGGGTGATTTCAAAGATGAGCTAGTTGATGAGAAAAATTCTGCTGAACCCATCAAAGGAAGTGTCTTTCTTGGAA AGCAGCTCAGAGTGAAAATCCCACCCCTGGAATATCCTTCATCATTCTCTCCATCCAAATCTCAAACTCATGGTGGTCAT GATTTTGGAACCAAAACCAAGGCCTCACAACAAAACACTGCAACTCAGGATTCTCCAAGTGTAGTTGTTACCAGTGTTCT GTCTCTGAGTGAGATGGAGCTTTCTGAGGAATACACATGTGTGATATCCCATGGACCTACCCCAAGAACCACCCACATAT TCAACAATTCCATTGTGGAGAGTTACTATTCTCTGCCCCCAGACTCTCCCTCTTCTTCTTCTTCTGTGAACTTCCTCAGC TTCTGTTACACTTGCAAGAAACATCTTGAGCAGACAAAAGACATCTTTATTTATGGAGGAGAGAAAGCTTTCTGCAGTAG AGAATGCCGCCACAGAGAAATGGTGTTAGATGGTGTAGAATGTTTAGATTTTGAAATTAATGACTATTTTTGA
Protein sequence (LotjaGi1g1v0717200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLRNRSRAVTKPPLMADHSSNPSPNQNCAKTIPSLFGSPKFRDFTNKCLSAGTDALRSPTSILDTRSFIPSFGFGNPFS HDKSTQTFPLKTSETRSSMVSKGIGLALVGDFKDELVDEKNSAEPIKGSVFLGKQLRVKIPPLEYPSSFSPSKSQTHGGH DFGTKTKASQQNTATQDSPSVVVTSVLSLSEMELSEEYTCVISHGPTPRTTHIFNNSIVESYYSLPPDSPSSSSSVNFLS FCYTCKKHLEQTKDIFIYGGEKAFCSRECRHREMVLDGVECLDFEINDYF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| PANTHER | 2 | 284 | 283 | 8.5E-104 | – | |
| PANTHER | 2 | 284 | 283 | 8.5E-104 | – | |
| MobiDBLite | 147 | 179 | 33 | - | – | |
| Pfam | 232 | 277 | 46 | 1.9E-20 | ||
| ProSiteProfiles | 237 | 281 | 45 | 21.204 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0717200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…