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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0723200 |
| Transcript ID | LotjaGi1g1v0723200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT3G57800.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48; TrEMBL-Plants: tr|V7CVR7|V7CVR7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0723200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129441049..129448638) extracted from Lotus japonicus Gifu genome v1.2.
CGGATTTTGAAGATCATGGTGGGCCCCGGATTAGGGTAATGTGGTCCCATAGTTTTCTTTCTTTGCCTGTAGGAAACTGT ATGGAACCGTACCCGTATAATACCAACAGTAATAAGAGTGTAACCGTATCGTAGCAACGTTGCTTTCGCAGTACTTCAAA TGGAGGAGAAGCAAGAGAACAGAGAGAACCGATTGACCGGTTGACCGCCATTAAACCACACACTCCTTTTTCCATTTCCC CTCAATTTCCCACCAAACCGAACGATTCAACACTCGATATCCAGTTTAATGGAGGAGCAATCTACAGTAGGGTTTCGCGG TTCAACTCCCGATGGCGTCCTTGTGCTTGAATCGATTCAATTCAACGACGAGATTCAGGGAATCGTGTCACCGGTACCGG CGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAGCTACCACCGACGCAGGCCGTGGAGCTTCTTCACTCGCCCAAC GTGAATCAGAAACCCTATCTACTAGGCTCTTTCAATGGCAATTTGACCTTCCCTTCCAACGCCGCGTTGATCGAACGCGC CGCGAAGTACTCCGTGTTTGCCGGAGAGAACAACAACTCGCCGCCGGTGAAGAACGAGCCGCAAGAGACCGATTCCAACC CGTGCTCGACTCAGGGGTACGTTTCGGATCCCGCCGTTGAGAACAAGAATCAGAGAAGCGCCGCCGCCAAGAGGAAGGAG CGAGAGAAGAAGGTACCAAATCCAGGAATTAGGGTTTCGATTTTCTGTGGAATTCAGTTTCTGAAACATGAAATTGTCAA TGGTTTTGTGAAATACAGGGTAGAGATTCGTCGTCGAAGAAGAGTAAGAGCGTCGCCGATGAATCCTCCGGCGGTGACGG CGAGAAGCTTCCGTATGTCCATGTTCGCGTTCGGCGAGGTCAAGCCACAGATTGTCACAGTTTGGCAGAAAGAGTAAGCT CTTGATTAATTAATTTAATTTGCTTAATTAAATCACTTTAATTTTAATTTAATTAAACTAAATTGAGTTTGTGAATTCTG ATGTTGTAGGCTAGGAGAGAGAAGATCAATGCGCGCATGAAGCTTTTACAAGAACTGGTCCCTGGTTGCGACAAGGTCGG TTTCACTTTCATGTGTTGTGGTCTTACTCTTCAAAGTCTTAATTAAACCTTTACTTACTTGGATTAATTGATAGTGATTT AATCATTTTTTGTGATTACCTATCATTATCTGTCTGATTTGTCTCCCAAATGACCAATTAAGTTTGTATTTGTTTATTAG TATAAGTATTGATTAATGAATTTTGTTATTGCACCTTTTCAACCCTCAAAAAAAGCGATTGCTTTCACGTCAAGTGAAGA GTGTGCCCACCGCTACTGAGTGTCAAAAATGGCATTTATGTCATTTCATCTTTTAGCTTTTTTTTTTTGGAGATTTCGTT TTGGTTACACATCTTTTTCGGAGGGTAGTTTTGTCATTTGAAGTTTCCAACCTTTTTACTCTTCTCTGACATTGGCCTTC TATATGTAGGTCCTATAGAATAGTCTAAGGTAAGTTATGGGTTTAATTTTAATTTTTTGAAAATTTGGGCCACTTTGGGA AATAATTTCTATAGGATAATTTTAAATTTTAAATGGGTCTGTCTTATTGTTTTTTTTTTTTTGCCATGATACTTAGACAC GACATCACATGCATGTAAAAGTCACCTGGAGTTATCACTCCTACAAAATAGCACTTGATTGGATAATTAGGAGTTAGGAC ACTTGCAAAAGGCGTATTTTTTCTCATAAGATTAGAGCATGTGATCAATCATTGACGTGCATAAATAAACTGTGTTTGTG CATTTCACCAAGTGCTGCACGTGGCAAAAGCTCCAACACTCAATGGCAATTATAGTATGGTAGTAGTAGGCTTTATTACA TGATTAGCTGTGGGGTTATGTGTTTGCATGAATAATCATTCTAAGGTAGTGTTTGGCCCAACTTATTTTTGACTTAAAAG TCACTTTTAAGGTAAAGTTGGGCCAAACAGATTTCATTAAAATTTCTTTGACTTAAAAGTTACTTATTTTTACTGAAGAA ATATGATAAAAGTAACTTTTTAGAAAAAGGCATTGAGAGGAGCTTTGAAAAAAAGGAGCTTCTCTTTTGGCCTAACTTAT TTGTATCTGTAGTGGTTTACGTGGGTTTATCGTGGTTTTTCTCCATCTTCTTCCTCTTGGAACCCTGGCTGTTTCCTATA TCGCCTTCCTCTACAGACTCGTGGTTTTGAATTTTGCACACACTCAGCCACTCAGGTACCGTTAACTATCTTTCTATTTT GATCTCTTTCTGAAATTCATGGATTTAATCACTGATTTCTACTCTCTGTGTGTGGTGATGTTAATATGAATGTCTTAATA TTTGGTTTTCTGAGTTCCATTAGGTCTTACATGCGTACTCTGATTCAACCGATTCTGAATATTTATATAATCTATACATG AACCAACAATTAATCATATACTAATATATACACAAATCTGTACAAGAATCAGATTTGTTATGAAATTCTTAAATTCCATT GTTATACGTGGCCGTGGGTGGGGTTAAATTGCCATTGTTATACGTGGGTGGGTTAGATAATGATTAAGATAGGATTTTGG GTTTGCTGCATAAGGGGAAGGGGCTATAATTAAAAAATGATTAAATTTATCATGTGTGAAACCAAAGGTTAAGTGTAAAC AGAACAATTTTAAGGCTTCTTTCTATGAGTGGGAAACTAGTCCTAGTGTTTGTTTGGGGGCTGCTATATCTTGGTAATTT TCCTACTGGGTTTTTTTGCTGCTAGTCCCTCTTGCCCCGGTTCTGTTAGCTGTCCTCAAAGCTGCTTGGTGTTGGTTTCT TTCCTACCTTGCCATCCTCGTGTTCTATGCTGCTACTTGTTGGACTTTTTAATGTTAGAGCAGCCTTTTTGTCTTTGGTT GTACTGTGTAAGGAGTTCATCACCAAGGGTTTAGGATTGGTGGATTCTTGTTTCTCTTGTTTCATGGTTCTGATCTCTGT TTCTTGTAAGGGATGTGGGCACCCCTAGTGCCAACCTCCTATTGTATCTCTACTTTTATTTATATACATATTACTTGGCC TTTCAAAAAAAATGTATTTTTTCTGTTTAGTTTTCTTCTTGGACTTCTTGTATGTACTCATTATCTTTGTGTCTTGTGTC CATGGAAAGCTTTCTGTCATATCTTTCTTGTGGTCTCTTGGTTATGAGGCGTGAGGTTCTTTATTCTGACTGTTGATGAG GGGGGTTTGGGTGTAGATGGGCATAGTTATATTATGGATTGAGCTGTTTTGCAATTTGGACCATGCGGGTGTGCTCACTC CATGCTTTCTGCCAAATATATCATCTATGTTCTGCATGTCTTTATGAAACTTTGTAAAATAGTTTTACCAAATAGCTTTT AACTTAAAAGTAGCTTTTAAGTTGTATAAAAATAAAATTTGACAAACAGCTTCTGCCTTTTTTTAAAAGCTCTTGTTTTT ATCTTTAACTTAAAAGTAGCTTTTAAGTCTAAAATAAGTTGGGCCAAACGATCCCTAAATCCCCTGTTTCACCTGATAAC TTTTCTGATTTCTAAATTATTTTTATTATTATTTTTTCCATATTTTAAAAATATTGATGTATTTAGTATTTCTTTTTATT TAATATTTTATTTACAAGAGGGTCTTTAATTTGTACTTGTCTATATTCAGCTTCCAGATAGTTTGTCCACTGGCTGGCGA CTCTGATTCATGGGCGCTTTACAATCATAGGTGTGCCCATGGATCATGGTTATTACCCTTCCGAAGTCTGGAAACCTTCA ATCAGCGGTTTTCTTCTATCATGCTTGTCTAATGAATGAGTTGCATTTAGCATCATTTTAGTTGTATGTTCCAAAACTGA AATCCAGGGGATGGTTTTAAATTGAGCTTTCAACTATAGGATTGAAAAAACAAATTGGAGATTGGTGGTGCCTTGTGCAG CAATGCATAGTAGTTTACTGTGCACCTTTCTTGGTGATATTGAAATGCTATTTTAATCATTCTAGTCTGTAGTCTGTACA TGTTTCTGAATATGGGGGAAGAATAATCTGGTTGAAGTTTTTTCCCTAAGATGGATTCTCTCTTTGTGGCCTAATTCCCA TATGTACTATGTTTCATCACTTGCGCACAGGTTTATTCATAAATGACCCCTTGTTTTTGTCTGATGTAGAAGCCTTAGTT ACCCGGTCATTCTATGATTTTGCAGTGCATTTGGACTGTGTTAAATTTTCTCAAAAGTTTTAATTTAGTACCTGACATGA CATAATCTATTTCACAGATATCTGGAACGGCATTGGTTCTGGATGAAATCATTAACCATGTGCAATCTTTGCAACGTCAA GTGGAGGTCAGACTCTCACATTGCAGACATTTGACATAAATAATTTACAAATAGCTGGCTATACTTGATAATTATTTGCT ATTTGGCTCTCAATTACATATGGCTTATGATGCATAGAAACTTTTGAAAGAAAAGGCTAGGTTTCCTTCACAAATTCTCT CCTGGCTCTTAAATTGAGCTTTCAACTATAGGATTGAATGAACCTAAAAAGTAGTTTTTTGCTTATATTGTGGACCGGAG GGAGTAATCTAAAGCTAGTGTGCGATGCTGGAATATTTGGGGGTCACTAGAACAAATAAAGCATTGCTTCCCTAAAAGCA AGGATTAGCATTAAATGTTAAGCTGTCATGGTACTGTTATTGAGGACTATATGACATATAATCTTCTTAGTGGGCCTACT TCCTTTCCCTCGTGTTGTTGACTTGAGGCATGAAGTTTCGAATGCGTAGCTTTGTATGTAGGTTTATTTAGCGTATATGC TAAAAAGTTATAATATTCTTGTAATAATATTTTGTTAAAATAAGCTGTTTAGAAGTGAACTGTGAGTCTAACCATAGACA TCATCGCAAGATTTGCAAGATTATTATAGTGATTTACATCAATATGGTTTTGGTCTCATTGATTTATGTTCTGATTGCAG ATCTTATCTATGAAACTGGCCGCAGTTAACCCAAGAATTGATTTCAACTTAGACAGCTTATTGACTGCTGATGTAAGTAT TATAAATTAATTTAACTCGATTTTTTTTTATTGGGGAAAAAATATCTATTTGCTTCTTTGGCTGGGGGTTAATCTGAAAA CTCTGAAATTCTCTTGTTTAGCTGAAACTATATTATATATGACCTCTTTTTCTGAAGCACTTTCTATTCTGCCTTCATTC GTTCCTTCTATGCTTTATGTCTTATGTAGGGGAAATATAATAGATCAAAATGTTGCTATTAATTGTTCATGTAGCTGTGT GTGCTTAATTCATCTTCGTCTGAAAACTAAAGCGGTACATGGTGGGTTCTGAAAGAGATTTTTGTGGCCTGTTGCTGTTA TTTATATCATTCTGTTGGATGTTATATTGTCATGCAAGAACAAGTAAGAAACAATATAAAACATGCACAAAGTTACAACA AGTTTGTCAGTATTTCAGAAATTCAGATAAATAATTAGTTTTGCACTTTATGGCCTAAATGTTTAATATTCTTCAATTAC AAACCCTCCTGCACATTGTAATTGAAGTAATGAGTGTTTGAATGTAAGTGTAACCTTGTAAGTATAGTGCTTTGTATAGC CTGTTCAGCCTTCAGTCAATATTGAGAACTGTTTATGAAATCTCCTTTGTAACTTTCAGGGGGTATCTCTAATGGACAGT AACTTACCAAGCATGGTTACACCTCTCATGTGGCCAGAAAACCCACTCAACGGTAACAGACCGCATTATCAACAACAATG GCAATTCGATGCATTCCACCAACCACTTTGGGCGAGGGAGGAAGACAACCATAATTTCATGACTCCGGAAACCTCACTTT TGAGTTATGACTCGTCAGCAAATTCAGGTAGACCAGAATTTAGCTTTTATTGTGCATATCTACTCTCAAGAGAAATGCTT ATGAGAGAATTTTCTAACTGCACATCATGGTTCCTACTGCTGAGGCACTGGTTTTCATCAATAGATGGAGATTGGAACTG TTTTCTGTCTTTTAATGGTTATTTTGACTATGAACATCATAAAGTAATCTTGGAAGGATGCTTAAGTAATAAACCTGGCA TTCCAATCTCTAAGTTACAAATTACTGATTTGTTTGAAAGGAATTAACTTAAACATGAAATATGTGTTAAAAGTGATTTT TTAATTTCTCAACAAGTAAATTTTGAAAGTATTTAAGTTCAATTTTAATTGTGTTACAGCATCTCTGCACTCAAACCAAT TGAAGATGGAGCTATGAAAGCGTGCAGAAGTTGCCGTATCAGTAGCTAATAGCCTAGTAGTGTATATATCAAGTATAGTA TTCGCAGTTAGCAGTGATCTTGAGCGGTATCTATGCTAATGCTATTCAGCAGGGTTTCCATGTCTTCTATTTATCAGGCT CAGTTGGAAACCTGGATTTTCTATGGCTAGAAAAGAGGAAGAAGAATCGGTAAGCTATTCTTATATAATACAAGTATCAT TATGTATACTAACTATAGGGGTCATTCAATCGACGAGATGATTGATTCAAGATTGTAAAATCATAGAACAGACTGTTACT GAATTATTATTGGAGTGAGTTGCTTTGTTCATTGCATGCTACTTAGATTATTGGCTTTTAATGAGAATTTCCTGAACAAG CTACTTTAATTTTGCATTACATGCAATATTTTCTTTCTCATTTTGATTTTCTACAGATGATTCATTTTGTTTTTCTTTTC CCTTTTTCATTGCAAAGTATGAAGTGTTGTTGATCATAGCAGCATTTCAGCTGGTCTATATTGTCTTCTACCTGGATTCC CTTGATGGTACTCTGAGATTTTCATTGCATTCTTTGTTAGAGTAAATTGACCTCTAATTGTGAAATAGGCAGATTTAATA GAATATTGAAGGTACATTGGGATTCTTGTTAGAAACACAAACGTGCCGTGAGGAACACTTGTTGCAATTAACCCAAAAAA TACATGCAAAGCTCCGAGGCTGTGTTGACGTAATATCTAAAAAAAGTATTTTATCAATTCCACACATGAATCCATAACTT CTCCAATTCATTGATTTTATCAAATTTTATCGGTATCTATCTATACATGGATTAACAAGGTAAAAAACATTGTTGAAGGG AATCTACTAGAAAATAAGAGAAAGAAGGCGTGATCATTAAAAAGTCCTCTAGTTCATAGACTATCTGGTTGGATAGAGGT TTATTAGAGCTTATCTAGAAAATGCACTGAATATACTTCAATAAATGTTTGGACCAACATCACATAGAAGTTACATGAAC TAGTCTATACGTTTGCAAGGAAATGTCAGAACTCGCTTCTCAAAATGGTAGCATTTATGCTCTATCTGAGAGGCATTATC AAATTGGGAAGGCCATTTTCCAAATATACCATCTATTCGACCTCATATTGTGGGTTTATGAGGCACAAAAGCATGTGGAG TAGACATCAGAGGAAGTGACGGTATTTGACTTAGTCAAGTCCAGTAGGTGATTGGTGAATTATTATAATA
CDS sequence (LotjaGi1g1v0723200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGCAATCTACAGTAGGGTTTCGCGGTTCAACTCCCGATGGCGTCCTTGTGCTTGAATCGATTCAATTCAACGA CGAGATTCAGGGAATCGTGTCACCGGTACCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAGCTACCACCGA CGCAGGCCGTGGAGCTTCTTCACTCGCCCAACGTGAATCAGAAACCCTATCTACTAGGCTCTTTCAATGGCAATTTGACC TTCCCTTCCAACGCCGCGTTGATCGAACGCGCCGCGAAGTACTCCGTGTTTGCCGGAGAGAACAACAACTCGCCGCCGGT GAAGAACGAGCCGCAAGAGACCGATTCCAACCCGTGCTCGACTCAGGGGTACGTTTCGGATCCCGCCGTTGAGAACAAGA ATCAGAGAAGCGCCGCCGCCAAGAGGAAGGAGCGAGAGAAGAAGGGTAGAGATTCGTCGTCGAAGAAGAGTAAGAGCGTC GCCGATGAATCCTCCGGCGGTGACGGCGAGAAGCTTCCGTATGTCCATGTTCGCGTTCGGCGAGGTCAAGCCACAGATTG TCACAGTTTGGCAGAAAGAGCTAGGAGAGAGAAGATCAATGCGCGCATGAAGCTTTTACAAGAACTGGTCCCTGGTTGCG ACAAGATATCTGGAACGGCATTGGTTCTGGATGAAATCATTAACCATGTGCAATCTTTGCAACGTCAAGTGGAGATCTTA TCTATGAAACTGGCCGCAGTTAACCCAAGAATTGATTTCAACTTAGACAGCTTATTGACTGCTGATGGGGTATCTCTAAT GGACAGTAACTTACCAAGCATGGTTACACCTCTCATGTGGCCAGAAAACCCACTCAACGGTAACAGACCGCATTATCAAC AACAATGGCAATTCGATGCATTCCACCAACCACTTTGGGCGAGGGAGGAAGACAACCATAATTTCATGACTCCGGAAACC TCACTTTTGAGTTATGACTCGTCAGCAAATTCAGCATCTCTGCACTCAAACCAATTGAAGATGGAGCTATGA
Protein sequence (LotjaGi1g1v0723200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEQSTVGFRGSTPDGVLVLESIQFNDEIQGIVSPVPAPENASSFTALLELPPTQAVELLHSPNVNQKPYLLGSFNGNLT FPSNAALIERAAKYSVFAGENNNSPPVKNEPQETDSNPCSTQGYVSDPAVENKNQRSAAAKRKEREKKGRDSSSKKSKSV ADESSGGDGEKLPYVHVRVRRGQATDCHSLAERARREKINARMKLLQELVPGCDKISGTALVLDEIINHVQSLQRQVEIL SMKLAAVNPRIDFNLDSLLTADGVSLMDSNLPSMVTPLMWPENPLNGNRPHYQQQWQFDAFHQPLWAREEDNHNFMTPET SLLSYDSSANSASLHSNQLKMEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 343 | 325 | 8.0E-155 | – | |
| PANTHER | 19 | 343 | 325 | 8.0E-155 | ||
| MobiDBLite | 102 | 174 | 73 | - | – | |
| MobiDBLite | 102 | 133 | 32 | - | – | |
| MobiDBLite | 136 | 165 | 30 | - | – | |
| Gene3D | 180 | 253 | 74 | 6.1E-12 | ||
| SUPERFAMILY | 181 | 252 | 72 | 8.51E-15 | ||
| ProSiteProfiles | 183 | 233 | 51 | 14.018 | ||
| Pfam | 188 | 234 | 47 | 3.0E-5 | ||
| CDD | 188 | 238 | 51 | 5.77547E-9 | ||
| SMART | 189 | 239 | 51 | 4.1E-8 | ||
| Coils | 223 | 243 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0723200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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