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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0726700 |
| Transcript ID | LotjaGi1g1v0726700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metal tolerance-like protein; TAIR: AT3G12100.1 Cation efflux family protein; Swiss-Prot: sp|Q6ICY4|MTPC2_ARATH Metal tolerance protein C2; TrEMBL-Plants: tr|A0A151TU55|A0A151TU55_CAJCA Metal tolerance protein C2; Found in the gene: LotjaGi1g1v0726700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129760121..129767826) extracted from Lotus japonicus Gifu genome v1.2.
AACCATCAGAAAATTGGATCATTACATCAAAGTAAATCTCAGACGACCGTCGTGAGAAAGTGACCAAATTCATCATATGG TTTTTTTTTATTACAAAATACAAACGACTATGGTCAATGTATATATGTTGTGTACATTACAAAACCTTGCACTAGGTTTT ATACTAGAAGGAGAACAAGATTAACTCACATTTTAGCAATGTGGGACTTGTCACTGTCTACATAATTCTGTGTCACCAGT TGAGACCCACTCGCCGCCTTCATTATCTACGAGTCCACTTTGACTTGGCTGCAGGATTCGCCATCACGGTTCTGGCACAT CCTCAAACTGTGGAGGTTTCAGCTCGAGTCACAAAACCCCTTTTCATTCACTGAGCCTGCGTTTCTCTCTTTTCTTTCTC CAAACCTAAAACCTCACATCCCCAATTTCCTTCTTCTTTTTCAGATGGAAGAAGCCAGAGAACCTCTTAGTTCTCTCAAC GGCGATTTCGGCTTCGGCGGCAGCGATCGGAGGTTCGCGTTTTCGCGGCAACCTTCGTTCCAACAGCAACCACCACCTCG CACGCCGACGACGACGATTCCCTCTTCCGATTCCACCCTGAGGCCCTTCCTTTCCCGAACCGATTCCAGCATTGACATCC CCTCTGGGGTGCACCACCATCACTATGAGTCATGGATTGACGAAAAAACTTCTGGGTTGGTCCCAAAATCGTCGTTTGTT TTCGCCATCTTTGGAAGTGTTAGGTCTGGCCATAGGTATATGAAGAGATTGTTTTTGTTGATCTCGCTCAATGTTGCGTA CTCCACTGCTGAGTTGCTTATTGGTCTCTTCACCGGTCGTGTAGGTGAGTATATATGATTGAACATTGAACTCAACTGAA TTGTAGTTTTAGTTTTGCTATTATCTGTTGGTGATTAATCATGAAAAAGAGTGGTGATTTTTTGTAGGCTAAGATGTTTG TAACATGTCTCTTCATGATGTAAATATGTTGTAAGGAGAAAATGTTGTAGGGGTAGGAGAAATTTGAAAATTCCAGTCAC TTTCAGATTTACATGATGTAAAAATGTTGTAAAATGAATGAGTTTAAACCCTAAACACTGATTTCCCTTTGGTAAAAATA ATCAATTTTTCAAAATAGAACCAGCTATGTCTACTGGTTTTTATATTGAATTTCTTCTGAATTTTCAGTCTATTACCTAT TCTTTTTCAGGTTTGGTGTCTGATGCAGTTCACTTGACTTTTGGATGTGGTCTTCTCACCTTTTCATTATTTGTTATGGG TGCATCTAGGAACAGAGCTGATCGAGATTATACTTATGGGTGAGATTTTTGTTTGAAGTATATTATTGTATTTAACAATG CAGGAGCATTTGTAGTTTCATGCCTAATTAAATGATGCAGTTTTACTCTGTAACTGAAATTTGATGTCTGAAGCATATAG GAAAATCATGTGCTTTGCTATTTTGTTTCTGGAAATTAGCCCTATAACTGTTACCATTATTATAAGTGCTCAAGGAAAAT GTTCCTATACAGCACTACTGTTATATCATACATTCAAGTTGTAGAATTCATAAGATGACAAAGTTGCATCTTCTATAGAA AATATTAGTTTTCACACTTGCTAAAGGGCACTTGTTAGTTTTTTACCCCGTCATTGCCGAGTTTGGCAAACCATGAAATC CTGCCTTTGGCTTATATGCCCATGTATAACTTTCCTGCATGAAATAGTTCTTCTAAATTTTATAATGGGGGGGGGGGGGG GTATTTCTATACTTCTATATAAGATTAAGAGTCGCAGTTCTGAAATATTATTAAACAAGAAAAATAAGATTTTTTTTAAT GAAGTTGCACTCAGATGCACACATGTTTAAACTCACACCTTGTGTTTGTGTGTGTGTGAATGTATTATTTAAATTATTGT TCACTGTCTGTTTAATCAGTTCAATCCTGTTTATAGTTTTGACTGAGGCACTTTAATTGCAGGTATAAAAGGCTAGAAGT TTTGTCTGCATTTACAAATGCCGTAAGTATACCACATCTCCTTTACCGCTATAGATGTTACTTTCTATCATACTGAATTG GTTGCCTGATGCTGTCAACAAGTTAAAGAATGGGGCTTGCATATAAAACTAAAATGGCATGGTCATCTAAAGCTATAGAG ATAATTGGTATTGGCCTGATGGTCTTAAATCAGGTCTTCTGATTTTTTTATGAGGTTTAATAGGCTTGACAAGTTGACGT GTAATATTTAGCCCTTGCTAAAATATCCATAAAATAGTTTTTTCATATTTATTTAGAAATTGCTATTCGCTTAAAATTTC ATGTACTTTTGTTGAGGGATTTATCTCATAACAAGTTGTATGGTATGGCGTGATAAATGGGAAAAAATGAAGAATTGATG TGTAATACTGATTTGACTTGCTATTAGCTATCACTTTACTTGGGCAGTGCAGTTTGTAATCCTGATGTTTGATTTGCCTT TAAGTGATCACTTGTATAGGAGTAAAAATTTGGTGTGATGTGACTGTTTTAAGTAAACTGGAAAACTACTTTTATTCTTT CTCTCCTGTTTGGTATATGATATATCACATATTCATTTTCATCAGTCTCGTTTGGTACATTACATTGAATACGCTAACGT GTTGGATTTTCCTTTTCTGCTGCTTGTGTAGACAGCTGTTTCTTTTGTTTATGTCATTCTCCCTAGCAGTTGAGGCACTT CATGCATTCATACAAGATGAATCAGAGCACAAGTAAGTTTGTAGTCACAACAATTGTCTGTGTTTATTACTTCTAATTAA GTATTTTACACAGAAGATGGTTTGTAAGGATTGTAGTAGTCAACATCGGAATTGATCTATTTGGTATTTGATTGGTTGTT TATCCATATGTATGATTTCTCTTATCTATTCAATTGCAGTGTGTTTATGGTTCAAACTAAAATACATTATTGATAAGTGA AGGAAAACGATGTCCATCTACATTAAGCCAGTTGTGGGATCTCTTGACTGTATAATAGTGTATTTATTTACCTATTTTGG TACAGCAAATGAGAAGGGATAGTATTTAACATATCAAAGTGAGGGTTTTCTTGAGAGAACCAAGGTTATTGTTTAAATGA ATTGGTAGCTGATGTGGGATATATTGGGACATGACTGGTTTGCGTTCATTATGATGTGTGCTAAAGGTCAGTCAATGTCT TTTATAGGGCTGTTAATAATACATGCCAGATTAGGATTTGATTTTGATGGTTTAATGGCAAATTCAAGCAAGGAATAATT GGGGTCGATTGGGTGAGGTTTAGCGCTTTCTACCAAAGACGCTAGTCTTTGTTGTTGATAAATTTAAAAAGCTAATGATA GAAGATGCAAAATATGCAGCAACATAACCTAGGCATGCCTTAGGTTCGTAAGTATCACACCCAAGAAGACGAGATGAATC ACCGCAAAATATTTTCTTTTGATGGCTTGTTGTATCAAGTCAAACTTTGACCAAATAGTTCACTACTTATGGCCCAAGTT AAATGACCATCCACTAATGAACATAAATAAAAACTTAAATAATCCAGAAAGGAAAAAAAATCTGGAAAATCACAAAAACT AAAGCCCATAAAAATACACGGCTAAATACCACGCTTTAGGATTCCCATATCAAATGGCTGAATTTTTCAATGAGTGATTT CTAGACTTGGGTATCTTTACGTGTATGATTTCTAGATCTTGCGGCTGACTCCACCTGTACTTTTTTGTTTCTTTCATCAT GGTTAGGGGGGTGTTTGCCTGAATTATGTTTTTCATTCTAATAATTTCATCCTTGAAGTTTTTTCTTTGTTTTATTGCTT CTGACCGTGTTCTTCTTGCAGGCATTACTTGATTGTTTCTGCAGTGACCAATTTATTTGTGAATCTCATTGGTGTGTGGT TCTTCAGGAACTATGCGAGGATTAATCTTGGTTAGTATTTTTTAGATGTTTATGATTCACTTGGTTTATTCGTTTTCCCC ATTTTGAATGGGATGGTTCCTTTTCACCCTAGACCTGTGATAAATATTATCTGTTTCTTCTGGAATTTATCGTGCAGCTT ACAGAAACGCAGAAGACATGAATCACCACTCTGTTTTCCTACACGTCCTGGCAGATTCCATTCGCAGGTAGATATGCTTG GCTTTATCTTTATGTATGTTATTGTGCATTGTGTATGATATTAATAAATCATCACCCTTTCAATGCTAATGCATTTCCTT TCCTAAGCACAAATTCATAGGAAGCTTATATACTTTTATGGTTTCTCAGCGCAGGTCTGATAATGGCATCCTGGTTATTG TCAATTGGGTAAATATCGTTTCATTTACTGTCTTTATATTCTTGAAAGATATGGAAAATAAAAAGCTTAACGGAAAAAAA AGAAAAGAAAAGAAATTGACAGTCTCCTAACCTGGTATTTCTTCAGCTATTGTAATTTGACTTATTTCTGTTTCCCTTTT TATAGGGTTCAGAATGCAGAGGTCTTGTGTTTGGGACTTGTTTCCGTAGCAGTTTTTATGCTTGCCGTGCCTCTCTTTAG GGCTACTGGTGGTATCTTGCTCCAAATGGCACCTCCTAGCATCCCAACTACTGCTTTAAACAAATGCTTGAGACAGGTAA TTTCTTTTTCTTGGTTAAAATGTGCTTTACCTCGTTTTGCTTGGGGATACTAACACTTACTTTACAGTTTACAATTTGTT AGGAACTGGCACATTTTATGCAGAAAAGATTAACAGTGTATTAATACAATGGGTTATTGATGAACTAAAGTAATTTTTTT CTTTCAAATTTTCTAAAAACACACCTTTGTCATATTTATAGATAATGTGGAGGTTCTACAAAACAATATTACACTGAAGC TGTTCTAATTTAATGTGTTTAGAAGTGTTGTAAAATTGTTGGGGAAGCTACATAATGCACTTACCAGTCACCACCTACTT GCATGTACACTTATTTTGAAATTCCTGGTTTAATAAACTAAAAGTTGTTATAGCATCACAATGTTTTGGCAAGTAAGTGT TTTTATCACAGGTCCAATGTTAATATATTATATTTTGTTCAGATTTCTGCGCTAGAAGATGTAATGGAAGTCTCCCAGGC GCGTTTCTGGGAATTGGTGCCGGGTCATGTGGTTGGTTCACTATTGATACAGGTAATTTAATATTCATTGTTTCCTTTGC CACTAGAGGGTGTTACTAGTAGTAGCAAAAACTGAAACTTGACTAGTTATTAGGTTGCAGTTTGGAAGAGCTTATTTTAT AATATAAGCATTTTAGCAGGTGTTTTGTTAAACTTGTAAAAACAACTTATAATCTACTTATTATCTGTTTTGAGTTTATT TTGATAAGCTTCCTAGGTAAGCTTATGAATAATCGCTTAACTATCAATAAATTCTGAGTTTATTTCAATAAGCATTTCTA ATAAACTTATGAATGAGCGATTATATGATAAGTGTTTATTGACAAAAGCAACAAAAGCAATTAAGCTGTTGTTCCAAACT CATGTCTATGGACAGGACATCCCTTGAAATATATATCTGCTGAGACAATCCTTCGCACTTTTACTAGTGCGCTCCCAAGT GAAATGTTTATCTTTTGTGAAGGGAGTAGGGACCTGAATTCCTTTTTCAATTTGTTATTATGTTAGTATGGCATGCTTTC TATCCTACCATTTAGTACTGAGTAGCTTGTGTAAATGCTTACTTTTAGTGGATTTTGCTGGCAGGTAAAGAAAGGGGTAG ATGATCGCCCAATACTAGAGTTTGTGCATGGTCTATACCACGAGTTGGGCGTGCAGGACCTAACTGTGCAAACTGATGAA GCATGAGATTATCTTGACAAGTTTTATGCTAATGTTATTCTTGAGGATTGTATACACGTCAATATCATTGTTTATTAATC GTCAAGGGATAGGAACATGATTTTTTATGTGAGCGGTACTTTTTTCTTGCCAAAATTAATCAGTTCGGTTACTTGTTAAC ATATTATTGTTTATTTTTTTGGTAAACACATATTATTGTTTATATGCTTCCTTACATGATTTTTTTCATTAATATATAGA CAAGTTTTAGAAATATTTCAAATAAATTTAGCCATTATTTTCTATGTTTAGTCTCTCCCTTGGTGGTTACATTGGGAGTG GCAGCAAATACATTTGCTGCATACCTGTACCGCAACATGGTTCCCGAGAATGCAAAATACTTTGCACTCTCTTTGAACTG TTCCCAGAAACACTTCCCTTCTCTGTGGTAGTAGCTTTTGCATTGCCCACATTCAAGTGCCAATCCATTGCATTGTTCAT CACAGGCTTCACATGCAGTGTTCTTCCTAGTTTCTTCCACCAAAGCCAGAGGGTGGGAGTGAGTATCATATTTGAAAGTT CCTCCAAACTTCACACGCCAACACTTGCCAACAACACAATGAGTATGAGCAGCAAAGTCACAATCATCACAGAAATAGAA CCATTGCTCCAATGACATTTTCTCACTGCAAATTCCACATTCATTTCCCCTCAAATCAGTTCCAGCAAAACATGTTAGCT TCAGAGGATGTTTGCCAAACACGTGCCATGCCTTATTCGGCAGAGTAGCGCATCCACAATCAATAGCGAAATCTTCACAA ACATGACACACATAGACATGATTAGACTGAAGGTGACAACCTTTGCATATTCTGGGAGCGCCCGTCTTCTCTAAGTGAAG AGGGTGATTGTGACTTTCATGTTCAATTGTGTCCTTTAGAGAACCGCAACAAACATCAAGGTCGAATTGACACTCATCAC AGCGATACACAAAGCCATTGCTCAGCCCTCTACATCCATCACACCTAAAAACGCCATCATATGGAGGTGCCTTGGGGAGA AGACTCAAATGGTGTATGTGAAAAGGGTGTTTCTTCGTTTTAGGCAACTCAGCACAACTTTGGTGAAGAACAAATCCACA ATTTTCAGAACAAGAAAAGAAAGGTGATGAGGTAATAATGGGTTGGATACACCCATCACAGAGTTTAATTTTATCATCAA CATTTTGCAAACTCTGTTCCTCCACGAACCTTAACAAATGTTCATGACAAAATAAACTGAAATCAATATCTTGGGATTGA TCAGATTCTGTATCTACTTCATCTTTTTTTGTCGTGGTATCCCAATAATCAGCGCAGCTAGAATGAACCCAAATCTGGCA AATGGAGCAAACACACGAGAGGATCTCGCTTGCTTTCTCGCCACAAGCGTAACAAACAAATGGTGATGTTGGATTCCACA AGGAGATAAAGGCATGCTTGTGGCCATCATCAGGGTTCCACTGAGAAGCACATGCTATGTCAAGGTCAAATTTGCAAAGA GAACAATGGTAGACGAACTTGTTGAAGATACCTCTGCAAGCATCGCATATGCAGATTCCTTCGTAAGGGGGAGTTGAAAG GAGTGTAAGGTGATGTTCAGGGTGAAATGGATGTTTCTTCTTGTTTGGAAGTTCTGCACATGATTTGTGAAGAACATAGT TGCACTGGTTGCAGCAGAAGACAGGACCTGAAATTGGTTTTTCACAACCTGAGCAAAAGACTTGCTCAACATCGTTTTGA TGATCCTCCTTTAACTGCAGTGGGTGGATATGGCTGAAATGTTTAATACTCTCCATCTATCTCTGCCTCTTTTGATTCTT GATTCTTGAGTTTTTTTTTTATAGGC
CDS sequence (LotjaGi1g1v0726700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGCCAGAGAACCTCTTAGTTCTCTCAACGGCGATTTCGGCTTCGGCGGCAGCGATCGGAGGTTCGCGTTTTC GCGGCAACCTTCGTTCCAACAGCAACCACCACCTCGCACGCCGACGACGACGATTCCCTCTTCCGATTCCACCCTGAGGC CCTTCCTTTCCCGAACCGATTCCAGCATTGACATCCCCTCTGGGGTGCACCACCATCACTATGAGTCATGGATTGACGAA AAAACTTCTGGGTTGGTCCCAAAATCGTCGTTTGTTTTCGCCATCTTTGGAAGTGTTAGGTCTGGCCATAGGTATATGAA GAGATTGTTTTTGTTGATCTCGCTCAATGTTGCGTACTCCACTGCTGAGTTGCTTATTGGTCTCTTCACCGGTCGTGTAG GTTTGGTGTCTGATGCAGTTCACTTGACTTTTGGATGTGGTCTTCTCACCTTTTCATTATTTGTTATGGGTGCATCTAGG AACAGAGCTGATCGAGATTATACTTATGGGTATAAAAGGCTAGAAGTTTTGTCTGCATTTACAAATGCCCTGTTTCTTTT GTTTATGTCATTCTCCCTAGCAGTTGAGGCACTTCATGCATTCATACAAGATGAATCAGAGCACAAGCATTACTTGATTG TTTCTGCAGTGACCAATTTATTTGTGAATCTCATTGGTGTGTGGTTCTTCAGGAACTATGCGAGGATTAATCTTGCTTAC AGAAACGCAGAAGACATGAATCACCACTCTGTTTTCCTACACGTCCTGGCAGATTCCATTCGCAGCGCAGGTCTGATAAT GGCATCCTGGTTATTGTCAATTGGGGTTCAGAATGCAGAGGTCTTGTGTTTGGGACTTGTTTCCGTAGCAGTTTTTATGC TTGCCGTGCCTCTCTTTAGGGCTACTGGTGGTATCTTGCTCCAAATGGCACCTCCTAGCATCCCAACTACTGCTTTAAAC AAATGCTTGAGACAGATTTCTGCGCTAGAAGATGTAATGGAAGTCTCCCAGGCGCGTTTCTGGGAATTGGTGCCGGGTCA TGTGGTTGGTTCACTATTGATACAGGTAAAGAAAGGGGTAGATGATCGCCCAATACTAGAGTTTGTGCATGGTCTATACC ACGAGTTGGGCGTGCAGGACCTAACTGTGCAAACTGATGAAGCATGA
Protein sequence (LotjaGi1g1v0726700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEAREPLSSLNGDFGFGGSDRRFAFSRQPSFQQQPPPRTPTTTIPSSDSTLRPFLSRTDSSIDIPSGVHHHHYESWIDE KTSGLVPKSSFVFAIFGSVRSGHRYMKRLFLLISLNVAYSTAELLIGLFTGRVGLVSDAVHLTFGCGLLTFSLFVMGASR NRADRDYTYGYKRLEVLSAFTNALFLLFMSFSLAVEALHAFIQDESEHKHYLIVSAVTNLFVNLIGVWFFRNYARINLAY RNAEDMNHHSVFLHVLADSIRSAGLIMASWLLSIGVQNAEVLCLGLVSVAVFMLAVPLFRATGGILLQMAPPSIPTTALN KCLRQISALEDVMEVSQARFWELVPGHVVGSLLIQVKKGVDDRPILEFVHGLYHELGVQDLTVQTDEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 108 | 108 | - | – | |
| MobiDBLite | 1 | 52 | 52 | - | – | |
| PANTHER | 5 | 387 | 383 | 3.5E-196 | – | |
| PANTHER | 5 | 387 | 383 | 3.5E-196 | – | |
| SUPERFAMILY | 103 | 308 | 206 | 1.05E-33 | ||
| TIGRFAM | 106 | 384 | 279 | 5.6E-46 | ||
| Gene3D | 106 | 307 | 202 | 5.0E-23 | ||
| Phobius | 109 | 129 | 21 | - | – | |
| Pfam | 109 | 307 | 199 | 5.0E-30 | ||
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 130 | 134 | 5 | - | – | |
| Phobius | 135 | 155 | 21 | - | – | |
| TMHMM | 141 | 158 | 18 | - | – | |
| Phobius | 156 | 175 | 20 | - | – | |
| Phobius | 176 | 198 | 23 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 199 | 209 | 11 | - | – | |
| Phobius | 210 | 230 | 21 | - | – | |
| TMHMM | 211 | 230 | 20 | - | – | |
| Phobius | 231 | 250 | 20 | - | – | |
| TMHMM | 250 | 272 | 23 | - | – | |
| Phobius | 251 | 273 | 23 | - | – | |
| Phobius | 274 | 278 | 5 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 279 | 299 | 21 | - | – | |
| Phobius | 300 | 388 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0726700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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