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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0729000 |
| Transcript ID | LotjaGi1g1v0729000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA binding protein; TAIR: AT4G19610.1 nucleotide/nucleic acid binding protein; Swiss-Prot: sp|Q5AJS6|MRD1_CANAL Multiple RNA-binding domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2S452|A0A0B2S452_GLYSO Multiple RNA-binding domain-containing protein 1; Found in the gene: LotjaGi1g1v0729000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130059904..130068559) extracted from Lotus japonicus Gifu genome v1.2.
ATCAAAATCAATGAAAAAACCAAGAGAGATCAAAATCAACAATTCACTATTTTAGAGGACCAAAAACATATTTCACCCTT TTAATGATTTTCCAATTTTGATTTGTTTTCAATCGGGTCCCACTACAGGCACTGCAAAACCCTAAACCCAAAGTTCAGCT GTTCATCGTTTTCTATTACCACCAAAGCTGGTTGCTCGCCGCCGCAGTTTGACGGCCATCGCCGGTTTCTTTCCTCCGCA CGGTTGTCGCTCCTGGTTCCCCAATTCTTACAGTACAGCTTAGAAGGAAGGTGTGTTTTGCTCATCCACTTCAGTTCATG CGTTTGCCTCCGCAACATGGTTTACTTATTAATATCATTCATATGCAATTAACCACGATTTAATATAATTCAAATCCATA TTATGCCTATGCTGTGATTTTGTAATGCAGTTTCTGAGGAAGACAGTGTTGAAAACTAAGGTTTTTTCATGGAAGTTGGA GATGAAAATTGCCCACTAACTGTTATGATGCTTCTCTCATAGAGTCATAGTGTTTGTTTATAGGACCAATTCAAATGGGT TTTGATTGTGTATAATGCATGAATTTTCAAATTGTATTATGACTGAGTCTTTTCTTGTACAGCTTCTTCTGTTATATCCA AGTGCAACTGCAAATATAGCAGGATTAGCCATGTAAGTGCAAATCTGTCATCTGTCTTCTTTAAATTAAAACACACAATG AGTTTGAACCAATATAATAATACTAAATGATTTGGTTATTTGTTTGTTGAGGTCGAGGATATGTGTGAAGAATCTCCCAA CAGATTATGCGGAGGATAAGCTAAGAGAATTATTTTGTCCGAAAGGACAAGTCACTGATGTCAAGCTTATGCGTACCAAG TACTCTTTCTTTCCTTCAATCACAATATCACTATTCCACTCTTAATTGGATATTCATTCAGAATTATAACTGTTCTGTGT TGATTTGTTTGTTAACTCAGAGATGGAAAGAGTCGCCAATTTGCTTTTATTGGATTTAGTTCAGACCATGAAGCGCAAGA AGCTATTCGATATTTCAATAGTAATTATTTCGGTGCATCTAGAATTACATGTGAGGTCTGTTGTTTATACCACTTTTTTT TTATATTTTTTTTCTTCTTTTTCCATACTATTTTATTAGTTACCTTATGAAATTTTTAATTATTGAAATGGAACTGCGGA AGCCTTACAACATGCTTTACTAAGTCTTGATCAACCAAACAGGTAGCTCTAAAACTTGGTGATGCAAATCTTCCGCGTCC ATGGAGTCGACATTCTAAAAAGAAGGACAATGAAGTGACCACCCCAGATGCAAACAAACATGTTAGAGCTAAAGATAAAG GAAACAAGTCTAAGGACATTGTTGATATTGATGACCCGCAGCTTCAAGATTTTCTTCAGGTCATGCAGCCTCGGGCTATG TCTAAATTGTGGGCAAATGATACATCAATTGTATCCAATGTTAGCAACAACCAAGAAATATCAAATAAGGACAGAAAAGG TAGAAAAGGTATGCCAGAAGTGATCTATCCCATCTCAGTTGAAAGTGGCTCGGTAGTAGATGAACTTCCAAACAATCCTG AACCCAACCAGTCACGTGAAGTTGAACATCATAAAGTGATTTCTGATATGGATTATTTCAAGAGTCGAGTCACAAGTGAG TGGTCTGATTCTGAAAGCAGTGATTCTGGAGAAGACAGTGACGACAAGGATTCAATGTGCATTGATGATGATGACAAAGA CAATCATAGTCATGCTAGTGAACATGAAGAAAACTGTGATAAGAACCCTTCTGAAAGAACCCCAAGAAAATGTGCTCAGG AGTTAGATCTAGAGGGTCAAAAAGATAGCTGTGGAGACGGTGTTGCCCCTAATAAAGCTCAAGTAAATGAAACTGTGCAA GAATCATCAAATCCTGAAGATGCTGGAGGAGTTTTTGAGTCCTGTCGACTGTTTGTCCGAAATCTGCCATATACCACCAC GTACATACATAGATATATTTACATCTCTCTTTGTTCTTCAATTTTTATGGATGCATATATTATATTATTTAGACAACTTT TCCAATGAAGTTATTTCCCAAAGAAGAAATTTCTTCAGCAATTTGAATTATTACATTACTACTAATATCTATCAGTGCTT CTGTGCTGTTATTTAACCTTACTATGATTTATATTTCCTGTTGGTTTAGCCATTGTATTGCTGTTTTGTTGCAGTGAGGA AGAACTGCACCAGCATTTCAGTAGTGTAGGACCTGAAGGTACTGTCTCAGAGGTTCATCTAGTTGTTGATAAAGATACGA AGCGGTCCAAAGGAATAGGATATATTCGTTATTCAGATCCGGAATCCGCAGCCAGGTAAGAAATGGGTGGCTGAAAGTTG TTGTCTCACTTTTGTTATATTAAATCATATTCCCTTAGTTCATGGTTGAGCTATTTAATTTGTTGGATATGCTTTTAAAA GTATCTCCAGGTTGCAGAGGTGCTCATGTTGGCACAAATACTCTTTGGAGTTTTGATCATTTTACTTGTAGAATTCCCTA CAGTCACTTCCACCGGTAGTTGGTTCTTTGGTGGTTTTGGTTAATTTTGGTTGTTGTCTCTATTTGGAATAATCTTTAGA GGATTTGGCAGAATCAAGGAAAGAAAGAGCTTATGATGATGTGCCATCTTTGCTTCTTTTTTTATGTATTTGATTGGAGT GAAATGCCCATGTTTTTCTCAGACCTCAGCCTTTTCATCTGAGCTTGCCTAGGATCATATTTATGACCACCTTTTTGTGC TCACCCTTATGTTTTTAAGGGTATCTTAGGAGATACACACAACGGATTGGGCTTTAGTTTTTTTTTTTTCTTTTTTATGT TTCTATACATATGTGTTGACAAGGGACATTTAATCCGAAAACATCTTGTTTGTGTTCTTGTTTCTTTTAAGTAATAGTGT AATACTTCCTTAAACTGAAAAAATAGTGTACTTCTTATTTAATGCACTAACTAAGTATTTTGCATCTAGGTTTTGATTAT AATTACTGTATTGGTTTAAGTTGTGAAAAAGTTCTGAAAGATTCTAAGAACATCTTGGAATTTATGAGCTTTTGTGCAAT GAATCAAATGTTGGTTGGAAATAATATGTACAGTGGGACAAAAAATGCGGGATCTTTATTGAAAGAAAGTGTTTCTCAGA TCTGTACTCAATGTGAGTGCAGACTGAGGTACATGCTAGGTGTCTGCTAGTTAGAAGTTTATTAGGAAAGTATATAAAAG GAGAATAGGGTTGAGTCAATAGTTATATCAAATATAGTCATTAGAAGAGAATAATCCAATATAGCTGAGAATGCGTTGGT AAATTTGTTTTGCTGATAATTGATGTGACAAAGTATGACAAATGTTTATCAGGGCGGTAGAAAACTTTGACAGTTCAATT TTTCAAGGAAGATTGTTGCATGTTATGCCAGCCATACAAAGACCTTCAAACAAAGAGTAAGTAAAATACAAACATTTCAT GGTGAACATTGCTAAATTATGTTGTTATTGTCTTTGCATTATCATGACAGTTATGGTTTGCATGTTCTAGGAACAATGTT TCGAAGGACCAGAGCTCTAAAACTCTCAAACAACGTAGAGAGGAAGAGAGGAAAGCAGCTGAAGCCGGTGGAGATACCAG AGCATGGAATAGTCTGTTTATGCGCCCTGATACAGTATGTTTCTTGAAACTTGGTAAATTGGAAAGGACTCAGATGTCTG TTTGGTTTCGATTTTCATTCTTTCCAAAAAAAAATCAGTTTTACTGACAAAATTGCCATCTTAATTCAGTGTTATCAAAT ATCTGCCATGGTAGTTTCTCATGGCGGTTTTTTGACTTTCCACCATGGCCGATATCCCGCCATATGGCTGCAATATTCCG CCATATTCCGCCATTATTTACCATGTATGGCGGGATTTCGGCTTCCTGCCATGACCCGCCATCCGCAATTAACAACACTG CCTTATTTTCACTTTGTTTCCTGTTTTCAAAGTTTTGAAGTGGAAACAGTGAAAATTGATAAAAGGTGGCGGTTTTATAA TTAAAACAAAATATAGATAATAAAAACAGAAAATAAAAATTGAAACGAACAGGCCCTTAGTTTTCCTGTTTTCCGCCTTT TGTGGGTGAAAATAGAATTTTTCTTGTGATGGAATTTGGCTCACTTTTTTGCTTCCTAAAAATGTTTTTGGGAGATGCTC TATTGTTCTCAGGCTGTATGTATCCTTCTACTTATTCATAATCTTGTCTTGTTATTAGGTTGTGGAAAATATTGCTCGGA AATATGGTGTAAGTAAAAGTGATTTACTTGATCGAGAAGCTGATGATCTTGCTGTCCGCATGGCTCTGGGAGAAACCCAA GTGATTACAGATACTAAAAATGCATTAACTAATGCTGGAGTGAATGTGGAGTCTCTAGAGGAACTTGCTAATCATAAAGT TGATGGCTTGAAAAGAAGTAGCCATGTGCTTTTAGCGAAGAATTTGCCCTATGGGTCGACAGAAAGTGAACTAGTGAAGT TGTTTGGGAAATTTGGTAGTTTGGATAAAATAATTCTCCCTCCGACAAAAACTTTGGCCTTGGTATTTTTGCCCTCTCTA TTCTCAAATTTGATGATTTTTTTTCATGTTTCAGTTTTTTTTTGGGCGGTATTTGATAGCTAATTATCTCATCTTATAGC TTAGTACCGTCATTTTCCATTTATTGATGCCTGCATTCAACTATTAATTGTATTACGTCCTTAAAGGTATGTGATAATAA ATCACTCTTGTTTTCCAAAATATCCAAAAGGACAAACAAATTACAATCTTGTGCGTACAGTTTACGCACCTTTTACATTT CAAATACAAATATACAATATGAATACTCAGACTGTTTTATATTTTGGAAAAATATCTTAATTCCTCATTTTATGGACCTT TGGGTCCTAAATGTTTTGCTTTCCATCGTGTAATGTAGATGGCGATAATTTACTCTATTATGCCTATTGCCACTTTGTTG AATATTTGTTCATTGGTGAAATTTTCCTTTGGCTGTGCGGTGTTTGTAAACTTCATTGTTTTTGGCATTACCTCTTTGTT TAATGATGTTTGTTTCAAGCTTTGAATTGTTTGGAGATGATATTTCAGGTTATTTTCCTTGAACCCGGAGAAGCAAAAGC AGCTTTTAGAGGTTTAGCTTACAAGCGTTACAAGTAAGATTTTATTTTTCTTCTGGCCATAGGTCACATAGCCCATTCAT CCGTGTTGAGTAATATTTTATTAATTTCTATCCATTGACAATCAAGTCTTTAGGCTACCCTCCACAGATGATTTTTTTGT TTCCTTCTGTCTTGAATATACATGTTGATATCTTCAAGAAAAAATAGAATAAAGAAAACTTGTGTGAGGGATAAGTATTA GGCATTTTGAATTGTACAAGCTGACATGCTATGGCTTCACCTTCTTTGTGTTATTTGCAAAGCCAAAAGGATAAAATGAG AGTGGGTGTACAAAATCCCTCTCACACACAAAGCGGGAGTGTAGACTGTACAGTATAGAATATATAAAAAAGAGATCACG GAAGAATAATCTAGAATGAAGCCTGTAACATGCTAGAGTAATTGCACTGAAGGTCGGAATTCGTTAGTTGGTAAAAGGTT ACTGTCACTCTTAGAAATGCTACTTGCACTTACAAACATGATTTCATTTACCTGTTTGTTTGAAATTTTGGTTAAAACAG CCCCCTTCTCCGATATCAATAAGTCGGCTTTCCATTGTAACAATAGGTGTTCCAGACCCTTATCTATCTTGATTCATTGA AGATTGTTGACTTGTTTCATATTCTATTCAATGTAGGGAAGCTCCATTATACCTGGAGTGGGCTCCTTCCAATATTCTTA GCCAAAGTTCAACGTCTAAAAGTAATGAAATGAATGGTGGAATTGGTGAAAATGATGCTAAACGTATGATATTGGAGCAA AATGTGGAAAGAATATCGGATGTGGATATTGATCCAGACAGAGTAGAGGTTCGCCCTATTAAATTGTTTTCTTAAATCAT TATTTTTATTTAGTTTTGTATTATTCGATCTGAAGTTGGAACACAGTCTCTGTTCCTACAAGTAGTAAAATGTTGCCATA TATATTTTTGCATCATGATGGTACCATGTTGAAGTATTCCATAGATTATTTTTCCGTCAGTCAATATTTTATTTTGAAAT TGTTCAAACTAATTGCTGGTAAATAATCCATGATGTTTATTCTATTATTGGTTATTTATTTAAATATTGTGCTTCAGGCT CGGTCGCTGTTTGTCAAGAATCTAAATTTCAAGACAACAGAAGAGAGTTTGAGGAAACATTTTAGTGAACACATTAAAGA GGGAAGAATTATGAGTGTCAAGGTAACGGGTTTAATTAAATGCCAAGTGTTAACATTTTACTTTTTATGGCTGGCTGTTT CTCATATATTTGCTTTGCTTCTTCCACGATTAGGTGAAAAAGCATTTGAAAAATGGGAAAAATGTTTCTATGGGGTTTGG ATTTCTTGAGTTTGACTCCATGGAGATGGCTACAAATGTTTGTAGAGATTTACAGGTATTTGCACATTGGATTCAAACTT GGCCTGTTATATGGATTTTTTGATCCTAATTCCTGTTCTAATTTTAAAATGAATATTTCTTTTATTTTATGTTTCTGGGA TTAGGGCACTGTTTTGGACGGGCATGCTCTTAATTTACAACTTTGTCATGCCAAGAATGATAGACCAGTACCAAGGTCGG TTGAGAAGGATAAGAGTTCAACAAAATTGCTTGTAAAAAATGTTGCTTTTGAGGCAAAAGCGCAGGAACTGAGAAAATTG TTTGACCCGTTTGGCCAGGTGATTACTGTTAAAAGTGATAATTTGTTCCAATTGCTAGTAAATATTCATTATTTCTGCTG TCCAATTTACTTATGAATGCATCTGTTACCAGTGACGACACATTCTGATGAATTATACCAGTCTTCAGTAGTGATTTCAA ACCTTTGGTCATTACTCATTACATCCAGTGAAATTGTTTTGGAATTATAGTTGACTGTTGAGTTGAATGAATTCTAATTT GAAAGCACATAATGCCGGTTGGTTGGTGTTGAACCACTTTTAAGGTGTTTTAGACTTCTATAATTTTAAGTAATTGAGTT CCATGCTGCTGATATAATGGCGATGTGCAATTATGTGAATAGTGCTCCAGAATATGAGCCTCATTTTACAATTATCTAGA TGTTTGGATGGGCCCAAACATATTAAAAAGGGGCGTTTGCCCCGCAAGAGAAAAGATCCTATTAAAGCAGTATTCAAATG CTGTACTGCCCCCCCCCCCCCCCCAATTTTTTTAATATTGTCTTGTTCCCTTGGTCATTATTAATTTTACTTACTGTGAA ATTTTCGCCCCCCTTTTCATTTTTCCTGGTCCGTCTCTTTCTAGATGCAAAATGGAAATTCTTTCACTTGCATCTTAGAT TTTGGAATTGAGATTTTTACCAAGTTTAGACTTGTTACTTAGTCTAAGATACAATGTCTGTTAACTGGTTCAAGTTATTT GCTTAAAGTGTATTCATTGTACCTAGTTATTTCATCTTAATTTATTGTCATATTTTAGTTAGTTTCAATGGATATTTCCT TCTTCTAAATGTGTGAATTAAGGCTCAATAATAATCAGTATGCTGCTTGTTTTTGGGAGTTACCTGTTTCAAAACTGTTG GTCCGTTTCAGCAAAAGTATGTAGATTCAGCTCTATGGTGCAACTATGCATTGCTTTATTTCCACTCATGTTTGACGGCT CCATGCAGATTAAAAGCTTACGGTTGCCTATGAAGTTTGGAAGTCATAGAGGCTTTGCTTTTATAGAGTATGTTACTCAG CAGGAGGCACAAAATGCTCTTACAGCGCTTGCAAACACTCACTTCTATGGTAGACATCTGGTAAGTAAAACTAGATTATG GATTTAAAGAATTTGATTTAGGCTCTCTTATAATGTTCCAGCTTCGCCTTATTCAGTGTTAACAAGGTCTCTGAAGATAG CAAATATCTGAGAACCAACGGTCGTTGTTGTTTTCAGGTGATAGAGAGAGCAAAAGAAGGTGAGAGTTTGGATGAACTGC GGGCTCGAACAGCTGCACAATTTAGTGAAGATAATGGATTTCAAAATGCTGCTAGGTTGTCCAAGAAAAGGAAGCTCAGT ATTTTAGATGAATGAATATGAAGTTTGAAGGTTAGTTGATTAGTCCGAGGCCAGAGATTCAAGTGTTTGTGCATACATAT CCTGAACTGAAGTCCAGGGATGACAATTTTGTAGATTGAAAGTTTTATAAGATGCCATGATGTTCCTGACATGAACTACT ATTGACACTGTCTGAAAGATTGAGCAAAAGGATGTTGTCATATTCACTAATTTTAAAAAAAGTTTGATTTATAAATGAGA TTATTTGAAAAGTACTGGAATATGTCGATTTGATTTGAAGTTATTTATCACATTATTTTGAAGAGTGTTTGTATGCAAGT GCAATGTTGTTAATTGATGATTCTACCAAAAAAATTCAAACTTATTTTTATTTTTTGCCTTTATTTGAAATTTTGTTCAA ATTTAGTAACATTGAA
CDS sequence (LotjaGi1g1v0729000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAGGATATGTGTGAAGAATCTCCCAACAGATTATGCGGAGGATAAGCTAAGAGAATTATTTTGTCCGAAAGGACA AGTCACTGATGTCAAGCTTATGCGTACCAAAGATGGAAAGAGTCGCCAATTTGCTTTTATTGGATTTAGTTCAGACCATG AAGCGCAAGAAGCTATTCGATATTTCAATAGTAATTATTTCGGTGCATCTAGAATTACATGTGAGGTAGCTCTAAAACTT GGTGATGCAAATCTTCCGCGTCCATGGAGTCGACATTCTAAAAAGAAGGACAATGAAGTGACCACCCCAGATGCAAACAA ACATGTTAGAGCTAAAGATAAAGGAAACAAGTCTAAGGACATTGTTGATATTGATGACCCGCAGCTTCAAGATTTTCTTC AGGTCATGCAGCCTCGGGCTATGTCTAAATTGTGGGCAAATGATACATCAATTGTATCCAATGTTAGCAACAACCAAGAA ATATCAAATAAGGACAGAAAAGGTAGAAAAGGTATGCCAGAAGTGATCTATCCCATCTCAGTTGAAAGTGGCTCGGTAGT AGATGAACTTCCAAACAATCCTGAACCCAACCAGTCACGTGAAGTTGAACATCATAAAGTGATTTCTGATATGGATTATT TCAAGAGTCGAGTCACAAGTGAGTGGTCTGATTCTGAAAGCAGTGATTCTGGAGAAGACAGTGACGACAAGGATTCAATG TGCATTGATGATGATGACAAAGACAATCATAGTCATGCTAGTGAACATGAAGAAAACTGTGATAAGAACCCTTCTGAAAG AACCCCAAGAAAATGTGCTCAGGAGTTAGATCTAGAGGGTCAAAAAGATAGCTGTGGAGACGGTGTTGCCCCTAATAAAG CTCAAGTAAATGAAACTGTGCAAGAATCATCAAATCCTGAAGATGCTGGAGGAGTTTTTGAGTCCTGTCGACTGTTTGTC CGAAATCTGCCATATACCACCACTGAGGAAGAACTGCACCAGCATTTCAGTAGTGTAGGACCTGAAGGTACTGTCTCAGA GGTTCATCTAGTTGTTGATAAAGATACGAAGCGGTCCAAAGGAATAGGATATATTCGTTATTCAGATCCGGAATCCGCAG CCAGGGCGGTAGAAAACTTTGACAGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCCATACAAAGACCTTCA AACAAAGAGAACAATGTTTCGAAGGACCAGAGCTCTAAAACTCTCAAACAACGTAGAGAGGAAGAGAGGAAAGCAGCTGA AGCCGGTGGAGATACCAGAGCATGGAATAGTCTGTTTATGCGCCCTGATACAGTTGTGGAAAATATTGCTCGGAAATATG GTGTAAGTAAAAGTGATTTACTTGATCGAGAAGCTGATGATCTTGCTGTCCGCATGGCTCTGGGAGAAACCCAAGTGATT ACAGATACTAAAAATGCATTAACTAATGCTGGAGTGAATGTGGAGTCTCTAGAGGAACTTGCTAATCATAAAGTTGATGG CTTGAAAAGAAGTAGCCATGTGCTTTTAGCGAAGAATTTGCCCTATGGGTCGACAGAAAGTGAACTAGTGAAGTTGTTTG GGAAATTTGGTAGTTTGGATAAAATAATTCTCCCTCCGACAAAAACTTTGGCCTTGGTTATTTTCCTTGAACCCGGAGAA GCAAAAGCAGCTTTTAGAGGTTTAGCTTACAAGCGTTACAAGGAAGCTCCATTATACCTGGAGTGGGCTCCTTCCAATAT TCTTAGCCAAAGTTCAACGTCTAAAAGTAATGAAATGAATGGTGGAATTGGTGAAAATGATGCTAAACGTATGATATTGG AGCAAAATGTGGAAAGAATATCGGATGTGGATATTGATCCAGACAGAGTAGAGGCTCGGTCGCTGTTTGTCAAGAATCTA AATTTCAAGACAACAGAAGAGAGTTTGAGGAAACATTTTAGTGAACACATTAAAGAGGGAAGAATTATGAGTGTCAAGGT GAAAAAGCATTTGAAAAATGGGAAAAATGTTTCTATGGGGTTTGGATTTCTTGAGTTTGACTCCATGGAGATGGCTACAA ATGTTTGTAGAGATTTACAGGGCACTGTTTTGGACGGGCATGCTCTTAATTTACAACTTTGTCATGCCAAGAATGATAGA CCAGTACCAAGGTCGGTTGAGAAGGATAAGAGTTCAACAAAATTGCTTGTAAAAAATGTTGCTTTTGAGGCAAAAGCGCA GGAACTGAGAAAATTGTTTGACCCGTTTGGCCAGATTAAAAGCTTACGGTTGCCTATGAAGTTTGGAAGTCATAGAGGCT TTGCTTTTATAGAGTATGTTACTCAGCAGGAGGCACAAAATGCTCTTACAGCGCTTGCAAACACTCACTTCTATGGTAGA CATCTGGTGATAGAGAGAGCAAAAGAAGGTGAGAGTTTGGATGAACTGCGGGCTCGAACAGCTGCACAATTTAGTGAAGA TAATGGATTTCAAAATGCTGCTAGGTTGTCCAAGAAAAGGAAGCTCAGTATTTTAGATGAATGA
Protein sequence (LotjaGi1g1v0729000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRICVKNLPTDYAEDKLRELFCPKGQVTDVKLMRTKDGKSRQFAFIGFSSDHEAQEAIRYFNSNYFGASRITCEVALKL GDANLPRPWSRHSKKKDNEVTTPDANKHVRAKDKGNKSKDIVDIDDPQLQDFLQVMQPRAMSKLWANDTSIVSNVSNNQE ISNKDRKGRKGMPEVIYPISVESGSVVDELPNNPEPNQSREVEHHKVISDMDYFKSRVTSEWSDSESSDSGEDSDDKDSM CIDDDDKDNHSHASEHEENCDKNPSERTPRKCAQELDLEGQKDSCGDGVAPNKAQVNETVQESSNPEDAGGVFESCRLFV RNLPYTTTEEELHQHFSSVGPEGTVSEVHLVVDKDTKRSKGIGYIRYSDPESAARAVENFDSSIFQGRLLHVMPAIQRPS NKENNVSKDQSSKTLKQRREEERKAAEAGGDTRAWNSLFMRPDTVVENIARKYGVSKSDLLDREADDLAVRMALGETQVI TDTKNALTNAGVNVESLEELANHKVDGLKRSSHVLLAKNLPYGSTESELVKLFGKFGSLDKIILPPTKTLALVIFLEPGE AKAAFRGLAYKRYKEAPLYLEWAPSNILSQSSTSKSNEMNGGIGENDAKRMILEQNVERISDVDIDPDRVEARSLFVKNL NFKTTEESLRKHFSEHIKEGRIMSVKVKKHLKNGKNVSMGFGFLEFDSMEMATNVCRDLQGTVLDGHALNLQLCHAKNDR PVPRSVEKDKSSTKLLVKNVAFEAKAQELRKLFDPFGQIKSLRLPMKFGSHRGFAFIEYVTQQEAQNALTALANTHFYGR HLVIERAKEGESLDELRARTAAQFSEDNGFQNAARLSKKRKLSILDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 97 | 96 | 8.5E-19 | ||
| ProSiteProfiles | 2 | 79 | 78 | 15.869 | ||
| CDD | 2 | 77 | 76 | 7.55757E-35 | – | |
| SMART | 3 | 75 | 73 | 1.3E-17 | ||
| PANTHER | 3 | 835 | 833 | 5.0E-288 | – | |
| SMART | 3 | 75 | 73 | 2.2 | ||
| PANTHER | 3 | 835 | 833 | 5.0E-288 | – | |
| SUPERFAMILY | 3 | 83 | 81 | 1.75E-19 | ||
| Pfam | 4 | 72 | 69 | 2.3E-14 | ||
| MobiDBLite | 87 | 122 | 36 | - | – | |
| MobiDBLite | 88 | 122 | 35 | - | – | |
| MobiDBLite | 186 | 270 | 85 | - | – | |
| Gene3D | 197 | 410 | 214 | 9.8E-28 | ||
| MobiDBLite | 198 | 212 | 15 | - | – | |
| MobiDBLite | 226 | 242 | 17 | - | – | |
| MobiDBLite | 243 | 270 | 28 | - | – | |
| SUPERFAMILY | 301 | 405 | 105 | 1.05E-26 | ||
| ProSiteProfiles | 316 | 397 | 82 | 17.251 | ||
| SMART | 317 | 393 | 77 | 0.11 | ||
| SMART | 317 | 393 | 77 | 1.6E-24 | ||
| CDD | 317 | 393 | 77 | 2.43684E-33 | – | |
| Pfam | 318 | 391 | 74 | 7.1E-18 | ||
| MobiDBLite | 397 | 429 | 33 | - | – | |
| MobiDBLite | 412 | 429 | 18 | - | – | |
| Gene3D | 506 | 602 | 97 | 2.4E-21 | ||
| SUPERFAMILY | 510 | 600 | 91 | 5.37E-14 | ||
| CDD | 513 | 584 | 72 | 7.72894E-37 | – | |
| ProSiteProfiles | 513 | 585 | 73 | 10.565 | ||
| SMART | 514 | 581 | 68 | 4.4E-6 | ||
| Pfam | 518 | 575 | 58 | 3.8E-6 | ||
| Gene3D | 630 | 722 | 93 | 4.4E-19 | ||
| SUPERFAMILY | 632 | 809 | 178 | 1.56E-38 | ||
| ProSiteProfiles | 633 | 716 | 84 | 15.016 | ||
| CDD | 633 | 714 | 82 | 8.34672E-30 | ||
| SMART | 634 | 712 | 79 | 16.0 | ||
| SMART | 634 | 712 | 79 | 4.1E-16 | ||
| Pfam | 635 | 709 | 75 | 1.1E-12 | ||
| Gene3D | 723 | 831 | 109 | 8.1E-26 | ||
| CDD | 733 | 807 | 75 | 9.17648E-40 | – | |
| ProSiteProfiles | 733 | 809 | 77 | 16.62 | ||
| SMART | 734 | 805 | 72 | 8.6E-18 | ||
| SMART | 734 | 805 | 72 | 5.6 | ||
| Pfam | 735 | 802 | 68 | 2.1E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi1g1v0729000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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