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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0729900 |
| Transcript ID | LotjaGi1g1v0729900.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ERD (Early-responsive to dehydration stress) family protein; TAIR: AT4G02900.3 ERD (early-responsive to dehydration stress) family protein; Swiss-Prot: sp|Q9SY14|CSCL2_ARATH CSC1-like protein At4g02900; TrEMBL-Plants: tr|A0A1J7GXC1|A0A1J7GXC1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130161835..130168116) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGACTGTTGCGGACATTGCTACTTCCGCAGCCATCAATCTGTTGTCTGCAGTTGCATTCCTGGTGGCTTTTGCGGT GTTGCGGCTTCAGCCTTTCAACGATCGCGTCTACTTCCCGAAATGGTACCTCAAAGGGATAAGAGGCAGCCCCACATCTT CCAGCTCGCTTGTGAAGAAATTTGTTAACCTTGACTTCAGGACCTACATTAGGTTTCTGAATTGGATGCCTGCCGCGCTG CATATGCCTGAGCCTGAGGTTATTGATCACGCAGGGCTTGACTCGGCTATCTATATTCGGATCTACATTCTCGGGTGAGT TTGTATGCCGAGTTTCTCATTTAAATTCGACGCGTAAGGACATAGTTTAAAAGATACAACATATGTGATCCGCGGATCAC ATTGTAGGTGAAGGGCAAGGGTTCGAACCCTAAGGAGGGATAATTTGTACTAATTTACTAACAGCTAACATTTGCCTATA AAAAAAAGTGATCCACGGACTACTATTTTCGATTTGAATACTTGATTTGGTTTTCCTTTTTAATGCTTAATTATTTTCTC TGATGGGAGTGATCATATGCAGCATCAAAATATTTGCCCCGATTACGGTTCTTGCTTTTATTGTTTTGGTTCCTATTAAC TGGACCGGGAAAACTTTGGAAGCACCGGGAGCCAAGGAGTTGACGTTTAGCAGTATTGACAAGATTTCAATATCAAACAT TCCATTTGGATCACAAAGGTGAGATAGATTCCCTTGACAGAGCTGTCTTGTCCCTAAGCTTCTCTCTTTTCTCTAACACG CGATGGATTCTTAACAAATTGAGAGAATTATTGATTGTGTTAGGAGCATAGTAGATTGCAAATTTGAATTTTGTCCTATA AACAAGCCAAATAAGAGTTCCAATATTAACTGAATTGGCATATCCTTTTGTTATTATAGGGTTGCAGACTCTTAGTTTTG TATCATGAATCTCATGTTATGTAATCTGGCTGCTTAGTATTTTATATTACGAAAATTCATGTTATTTTCTTCCAGATTTT GGGCACATATTGTCATGTCATATGTCTTCTCAACTTGGACATGCTATAGTCTTTACAAGGAGTACAGGATTATAGCAACA ATGAGATTGCGATTTTTGGCGTCTGAACGTCGTCGACCAGACCAATTTACTGTAAGTTGGTCTCATTTTCTCTTAACTGT ACCTTTTGCTCTTCATACGTAAAAACATATAGTATTGATTAATGCTACGATTAGCTTCAAACTGCTGACTAAGTAATGTC CGGGCTGCGGAGGGGAATTAGGCAATTATTCGGGTAGTGTGGGTTGGCTTCCGCCTGGGCAGAGAAGTTTTTTTCTGATT TATCTTACTGTTTTCCTTTACACATTCTGTAATTCCCTGTTCTATTCAGAGCTAGTCTCTGAGTTTTCTGTAGTAATACA AATACCACATTTAGTTCCTATCAGATACAAACTCCTTCAGCTTGTGCTTGATTAATGAGACATTGGCAATTAGCAAGTTA GTATCAGACAATTGGTATTTTAGCAATTATATCAAACTTGTGCGAGAAAGTGAAACTAATCTTTTCAGATTCTAGTCTTC TAAGTTTTATATGCCTTTTCTTGGGTCACTTTCGAAGTGAGTTGTGGTGGCTTTCATTTCTCTTTTGTATATTTGCATGC TTCCCTTCCAGTCATTTAAAAACTGAACTAATAGCTGCAGCAATTCTAGCTAGCTGTTCTGAAGCAAGCTGAACGTTGTT TCTTAGTAACAACTTTGGCACTTTTTTTTTTCACAGGTGCTAGTCAGGAATGTTCCCCCAGATCCCGATGAATCAGTCAG TGAGCACATTGAACATTTCTTTTGCGTCAATCATCCTGATCACTACCTGATGCATCATGTATGTTGCTTAATTACGACTA CAGTAGTCTGGCAAATATTTAGTCTGTTTTTAGTTGGAAATTATCACACCCTTCTTCACATGCTTACATAAATACTCATA ATTAGAAAAAAATAGCACAAAATTTTCAAGCACAAAATTTAATGTGGGTTACTCCAACAAGTCTACATCCTGGTATCAGA AGAGATTAAATCAATTGTGAACAGCATTAGTGCAAAACTTTTAAACGACAAAGCTATGAACATTTTCCCACTATTTCTGT AACTTTGCATTGATGTTACATATCCTCACTCGCTAGTAACTACTATTACAGTTTTATGGACAAAGCTAGAAACCCTCGCC CAACATCAGGCTCAATTTCTTCTCCCTCATTCTAATAGTCCTACCAACTCCTTGACACTATTAGTTTTAACTTACCAAAA ATATGCTTGATAAGCAGCCACTCCCATGCTATTGTGGTACTATTAGTATGCTATAAAAATGTCAACAACTTCAAAATAGG AAACCAGGAATTATTACCTAGATAAAATTTGGGTCAAACCCAACATTTTGATACATTGCTGTTTGCTCTTCATCTTGGAA TTAGGAATTGTAATTTACTGAGATTTTCTTTAACAGATGGAAGGCTTTCTGTTATGATTCTTGAACATGATTACTTTTGT GATATACTCTGGTGTACCAAAGATAAATTTCTTCTGCATTATTGATAGGTTGTTTATAATGCAAATAAGCTTGCATCAAT AGTTGCAAAGAAGAAGAAATTGCAAAACTGGTATATTTACTACCAGAACAAATATGAAAGAGATCCTTCAAAGAGACCAA CTACTCGGGTAGCTTTATCTTCATGATTTACTATTAATAAGCTTTTCCTAAATTTCAGCAGAAGAAACCTTCTTTTAGCT TTTCCTATTTTTTTTGTGAGAATAACCATAAGGTGATATGAACTGATATCCTTTTATGTGTCACAATTTGATTTCATATG TATATAGACAGGTATTATGGGTATTATTGGGACTAAAGTTGATGCTCTTGATCACTATACTGCAGCAATTGATCAATTGA GCCTACAAGTAAGTACTGTTTTGAACATGTTTTATTATACAGTAGTTTATACAACTCTCTGTAACTTATTGGCTTTATTT GGATAACTAAGCATGAATTGTAAGGAAAACATTTCATTGGGTTTAATTTCATTCCATTTTATTTTAGTCCAATCTAAACA ATGGCAAATAACATACTCTATTCCATTTTGCTCCATTTTATCAATCCACACATAACCTTATAATATTGTAAATTAATCAA ATTATAATAGTTAGGTATCATTGTTATTTCACTCTATATAAGGGGCTATGCTTTTGAAAGTTCAGTCATGGAGTCCAAAA GATTTTGAATTTTTCATCCAATTCTCTGCTCTCACTTAGCAAGCTAAATATGTTGTCTCACTATTGATTACTGTTATTAG GTTTGTCTTACTAATTAGGTTGGTAAGCTCCTCATTCTAATGGCTTCAGTTCTCTCTTGCAGTGATTCATACTAAACACA GAGTTAGTTTATTGATTTATTATAATCTAAGAAATGGTGACTACTTGAACTCTAGTTGTCTTGGATTGGATGTTAAAACA AAGGTTCATCTTACACCGGTAGGGCATGATATGTAAGGCCGTAAGTGGAAAAAAAGTGAAAGGGTAGGGTAAAGGATAGT CAGTCATATTAATTGTGAGTCAGTACAGATTAAAGGCAACAGTTACCTTTGGTTAAATTTTCCCATTTGCTTTTGTTTGT GTGTGTCCGCTTAAAAATCTGTTCATTTGGGGATAAATTTTATCGTGTTCATTTCAAGCAGGAAGCTGTAGAAAGAGAAA ATGTTATGAAGGATCCCAATGCTCTTATTCCTGCAGCATTTGTTTCATTCAAAACCCGATGGGGTGCAGCTGTTTGTGCT CAAACTCAACAAACTAGTAATCCAACCATTTGGCTGACAGAATGGGCTCCTGAGCCTCGTGATGTCTACTGGGAAAATCT TGCAATTCCATATTTTGATCTCAATATTCGAAGATTACTCATGTCTGTCTCTTTATTTTTCCTTACTTTCTTCTTCATGA TACCAATAGCATTGGTCCAATCTCTAGCCAACATTGAGTCGATTGAGAAGGTCCTTCCTTTCTTGAAGCATATAATTGAA AAGTAAGTGCTTTCAATATTATACCAGTTAATTAGTATTCTAATTTTGAACTCTGAATAGCTTAATAATTCCCCCTTGAT TCTCCAATATTTTGTTATATGAACCATTTGTCAAACGTTTTCTTTTTGCCTTTGAAATCTAATGTGAAGAAACTCATAAA ATTAATTTAATCCATCAAGAGAGCTAGAATAATGTTTCTGAAGTCTGAAAGATCAGCAAAGTTTATCATAGTAAACAACC CACCATTCTAGATTAATGTTATATTTTCTGCTTCTCCTTGCCATACAGACACAGTCTTCTTAATTCACACAGCAAAAATT ATTAACATTTTTAAAATTCTCAGCACATCAAATTCTTTTATTATTTCATGTAATACTTGTTATTTTAATCAACTAGGAAT CATGTCGGAAAGATTTATTAATAGAATTGTTTAAAAACATAGAATTTTTTTAATTGAATAACCTTCTGAACTATTTTTTT AATTGATAAATAACAAAATATTGAATGTTTATTTTTATATTTAAAGATTATATACTTCTTTTGATATCTTCTTTAATGTT ACTAAGAGAATTATTAAGAAGCCGGATAACTTTCTGTACCTGTTTCCTTTTTCGATGGAATGCATAGTATTTTCCTGTGT GATTCTGTGGAGTCATGGAGTTACTCGTTGCAGGCCATCTGTCAAGTCTGTTATTCAAGGATTTCTGCCAGGGCTAGCAC TGAAGATATTTCTTGCAATGCTTCCAAAAATTCTCATGGCAATGTCCAAAATAGAAGGTTTTTCATCACTTTCATCTTTG GAACGGAGGTCAGCTTCCAAATATTACTTGTTTGTTCTCGTCAATGTGTTCCTTGGAAGCGTTATCACTGGAACCGCATT TCAGCAACTTCAGCAGTTTATTGATCAGCCCTCTACAAAGTAGACTCCATGAGCTTGTGCAGTTTAGATAGCTTTCATTT TGGCACTGAGATTGGCCACAAACTGATGGGGGGATTTGTATGAAAATTTTCAGGTTCACAAAAACGGTTGGCAGTACAAT CCCCATGAAAGCCACATTCTTCATCACATACATAATGATCGATGGATGGGCTGGAATAGCTGCAGAGATCCTTAGGTTAG CTCCGTTAATTACGTTCCACTTGAAGAACACATTCTTGGTGAAGACTGAGCAAGACAGACAGAGTGCTATGGATCCTGGT AGCTTGGAATTTGCTACATCTGAACCTCGTATCCAGTTATATTTCATGCTAGGGCATGTCTATGCTCCAGTCACACCTTT ACTCCTCCCCTTCATTGTAGTCTTCTTTGCTTTTTCCTACCTGGTCTTTCGGCACCAGGTGAGCTCTGGAAATAGACTTC GCCATCATATTTTGTTACTTATAATTAATAATTAATGCATATCCAAACAAACGAACTAACTATTGGTTGGTTCAGATAAT ACATGTCTAATTTCCCTTGAGCAAAGTGAGAGAGCTTGCTTAGCCCCACTTTGATGTTCCCAACTCAAATTGCATTACAC CTCTTTTTCCTGCTAAACATTAGAGTAAATAGCATTAATTCTGTTTCTTTTTTCTTTTCCCAAGATTATCAATGTGTATA ACCAGCAATATGAGAGTGGAGCATCCTTTTGGCCTGATGTCCACCGTCGAGTAATCATAGGCTTGATTATATCTCAGTTT CTTCTGATGGGGTTGTTAAGTACAAGAGGCGCCAATAAGTCGACCCTGTTGCTTATTGCACAACCTGTCTTGACAATCTG GTTCCACAGATATTGCAAAGGGCGCTTCGAATCTGCGTTTGTAAAATTCCCACTAGAGGTTGGTTAAGCAATAAGCATGC ATACAAATACTTGTATTAAATATCGTGTATGCTAAATTGAGAGTAAATCATATACATGCAAAGAAACAAGCTGGTGTGTG CATTGGCAGAATGACTTATATGTGATTTGATGACAGGATGCCATGGTGAAGGATACACTTGAACGAGCTGTTGAACCAAA CTTGAACCTGAGACTTTATCTTCAGGATGCTTACGTGCACCCAGTTTTCAAGGGCAACGAGTTGGAAAAACCAGTAATCA TTGATGACGAAGAGGAAAATCCACTTATTCCGACAAAAAGAAGTTCTCGTCGGAGTAGCAAGCCTCAATCTGATAATGGA GCCGGTAGTGCTAGCAGTTCCTCAGGTGCAGCCGTCATTTGA
CDS sequence (LotjaGi1g1v0729900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACTGTTGCGGACATTGCTACTTCCGCAGCCATCAATCTGTTGTCTGCAGTTGCATTCCTGGTGGCTTTTGCGGT GTTGCGGCTTCAGCCTTTCAACGATCGCGTCTACTTCCCGAAATGGTACCTCAAAGGGATAAGAGGCAGCCCCACATCTT CCAGCTCGCTTGTGAAGAAATTTGTTAACCTTGACTTCAGGACCTACATTAGGTTTCTGAATTGGATGCCTGCCGCGCTG CATATGCCTGAGCCTGAGGTTATTGATCACGCAGGGCTTGACTCGGCTATCTATATTCGGATCTACATTCTCGGCATCAA AATATTTGCCCCGATTACGGTTCTTGCTTTTATTGTTTTGGTTCCTATTAACTGGACCGGGAAAACTTTGGAAGCACCGG GAGCCAAGGAGTTGACGTTTAGCAGTATTGACAAGATTTCAATATCAAACATTCCATTTGGATCACAAAGATTTTGGGCA CATATTGTCATGTCATATGTCTTCTCAACTTGGACATGCTATAGTCTTTACAAGGAGTACAGGATTATAGCAACAATGAG ATTGCGATTTTTGGCGTCTGAACGTCGTCGACCAGACCAATTTACTGTGCTAGTCAGGAATGTTCCCCCAGATCCCGATG AATCAGTCAGTGAGCACATTGAACATTTCTTTTGCGTCAATCATCCTGATCACTACCTGATGCATCATGTTGTTTATAAT GCAAATAAGCTTGCATCAATAGTTGCAAAGAAGAAGAAATTGCAAAACTGGTATATTTACTACCAGAACAAATATGAAAG AGATCCTTCAAAGAGACCAACTACTCGGACAGGTATTATGGGTATTATTGGGACTAAAGTTGATGCTCTTGATCACTATA CTGCAGCAATTGATCAATTGAGCCTACAAGAAGCTGTAGAAAGAGAAAATGTTATGAAGGATCCCAATGCTCTTATTCCT GCAGCATTTGTTTCATTCAAAACCCGATGGGGTGCAGCTGTTTGTGCTCAAACTCAACAAACTAGTAATCCAACCATTTG GCTGACAGAATGGGCTCCTGAGCCTCGTGATGTCTACTGGGAAAATCTTGCAATTCCATATTTTGATCTCAATATTCGAA GATTACTCATGTCTGTCTCTTTATTTTTCCTTACTTTCTTCTTCATGATACCAATAGCATTGGTCCAATCTCTAGCCAAC ATTGAGTCGATTGAGAAGGTCCTTCCTTTCTTGAAGCATATAATTGAAAAGCCATCTGTCAAGTCTGTTATTCAAGGATT TCTGCCAGGGCTAGCACTGAAGATATTTCTTGCAATGCTTCCAAAAATTCTCATGGCAATGTCCAAAATAGAAGGTTTTT CATCACTTTCATCTTTGGAACGGAGGTCAGCTTCCAAATATTACTTGTTTGTTCTCGTCAATGTGTTCCTTGGAAGCGTT ATCACTGGAACCGCATTTCAGCAACTTCAGCAGTTTATTGATCAGCCCTCTACAAAGTTCACAAAAACGGTTGGCAGTAC AATCCCCATGAAAGCCACATTCTTCATCACATACATAATGATCGATGGATGGGCTGGAATAGCTGCAGAGATCCTTAGGT TAGCTCCGTTAATTACGTTCCACTTGAAGAACACATTCTTGGTGAAGACTGAGCAAGACAGACAGAGTGCTATGGATCCT GGTAGCTTGGAATTTGCTACATCTGAACCTCGTATCCAGTTATATTTCATGCTAGGGCATGTCTATGCTCCAGTCACACC TTTACTCCTCCCCTTCATTGTAGTCTTCTTTGCTTTTTCCTACCTGGTCTTTCGGCACCAGATTATCAATGTGTATAACC AGCAATATGAGAGTGGAGCATCCTTTTGGCCTGATGTCCACCGTCGAGTAATCATAGGCTTGATTATATCTCAGTTTCTT CTGATGGGGTTGTTAAGTACAAGAGGCGCCAATAAGTCGACCCTGTTGCTTATTGCACAACCTGTCTTGACAATCTGGTT CCACAGATATTGCAAAGGGCGCTTCGAATCTGCGTTTGTAAAATTCCCACTAGAGGATGCCATGGTGAAGGATACACTTG AACGAGCTGTTGAACCAAACTTGAACCTGAGACTTTATCTTCAGGATGCTTACGTGCACCCAGTTTTCAAGGGCAACGAG TTGGAAAAACCAGTAATCATTGATGACGAAGAGGAAAATCCACTTATTCCGACAAAAAGAAGTTCTCGTCGGAGTAGCAA GCCTCAATCTGATAATGGAGCCGGTAGTGCTAGCAGTTCCTCAGGTGCAGCCGTCATTTGA
Protein sequence (LotjaGi1g1v0729900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATVADIATSAAINLLSAVAFLVAFAVLRLQPFNDRVYFPKWYLKGIRGSPTSSSSLVKKFVNLDFRTYIRFLNWMPAAL HMPEPEVIDHAGLDSAIYIRIYILGIKIFAPITVLAFIVLVPINWTGKTLEAPGAKELTFSSIDKISISNIPFGSQRFWA HIVMSYVFSTWTCYSLYKEYRIIATMRLRFLASERRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDHYLMHHVVYN ANKLASIVAKKKKLQNWYIYYQNKYERDPSKRPTTRTGIMGIIGTKVDALDHYTAAIDQLSLQEAVERENVMKDPNALIP AAFVSFKTRWGAAVCAQTQQTSNPTIWLTEWAPEPRDVYWENLAIPYFDLNIRRLLMSVSLFFLTFFFMIPIALVQSLAN IESIEKVLPFLKHIIEKPSVKSVIQGFLPGLALKIFLAMLPKILMAMSKIEGFSSLSSLERRSASKYYLFVLVNVFLGSV ITGTAFQQLQQFIDQPSTKFTKTVGSTIPMKATFFITYIMIDGWAGIAAEILRLAPLITFHLKNTFLVKTEQDRQSAMDP GSLEFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQQYESGASFWPDVHRRVIIGLIISQFL LMGLLSTRGANKSTLLLIAQPVLTIWFHRYCKGRFESAFVKFPLEDAMVKDTLERAVEPNLNLRLYLQDAYVHPVFKGNE LEKPVIIDDEEENPLIPTKRSSRRSSKPQSDNGAGSASSSSGAAVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 3 | 751 | 749 | 0.0 | – | |
| PANTHER | 3 | 751 | 749 | 0.0 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Pfam | 7 | 179 | 173 | 3.4E-48 | ||
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 100 | 70 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 101 | 123 | 23 | - | – | |
| Phobius | 124 | 157 | 34 | - | – | |
| TMHMM | 158 | 177 | 20 | - | – | |
| Phobius | 158 | 177 | 20 | - | – | |
| Phobius | 178 | 374 | 197 | - | – | |
| Pfam | 200 | 362 | 163 | 3.3E-42 | ||
| Pfam | 373 | 645 | 273 | 1.3E-80 | ||
| Phobius | 375 | 399 | 25 | - | – | |
| TMHMM | 379 | 401 | 23 | - | – | |
| Phobius | 400 | 426 | 27 | - | – | |
| TMHMM | 424 | 446 | 23 | - | – | |
| Phobius | 427 | 446 | 20 | - | – | |
| Phobius | 447 | 466 | 20 | - | – | |
| Phobius | 467 | 486 | 20 | - | – | |
| TMHMM | 467 | 489 | 23 | - | – | |
| Phobius | 487 | 514 | 28 | - | – | |
| Phobius | 515 | 535 | 21 | - | – | |
| Phobius | 536 | 580 | 45 | - | – | |
| Phobius | 581 | 604 | 24 | - | – | |
| TMHMM | 582 | 604 | 23 | - | – | |
| Phobius | 605 | 625 | 21 | - | – | |
| Phobius | 626 | 645 | 20 | - | – | |
| TMHMM | 630 | 647 | 18 | - | – | |
| Phobius | 646 | 766 | 121 | - | – | |
| MobiDBLite | 728 | 766 | 39 | - | – | |
| MobiDBLite | 739 | 766 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0729900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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