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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0731100 |
| Transcript ID | LotjaGi1g1v0731100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2OG-Fe(II) oxygenase family oxidoreductase; TAIR: AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein; Swiss-Prot: sp|Q01118|SCN7A_HUMAN Sodium channel protein type 7 subunit alpha; TrEMBL-Plants: tr|V7CZP5|V7CZP5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0731100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130279807..130285637) extracted from Lotus japonicus Gifu genome v1.2.
CTCTGCATGTGACTCAATACAACTTCTCAACAAACTCTCTCTCTCTCTCTCTCTCTCTCAGTCACATCCACACACTCTCT CTCTGTGTGATTCGGCCATTGAAAATGGCGGCTGTTCCAGCAGCAACGCGGAGTGATCATCCACCGAAGACGCCGCCGCC GCAACCGGCACCGCCGGCGGTGCTGGTCTCCGACTCCTACGCTAAGGACGCCATCCTCGCTTGGTACCGCGGCGAGTTTG CTGCCGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCAAGGACCTCGCCGACCCCTCAGACTACGCTTCCACCTTC GCCGCCATCCACCGCCGCCGCTTCAACTGGATCCCCGTCATCCAGATGCAGACGTACCATTCCATCGCCGATGTCACACT CGAGCTTCAGAAGGTCGCCGAGAATATGAAGCAGCGCGAAGGAGGGCGGAGCACCGGCGGCGAGAGTGAGTTCCATCCGA AAGTAAAGATCGAAGAGAAGGAGAAGGAGGTGCTGGTGGAGAATGTCGGAAATGGAGACGCCGTCGCGGACGCCGAAGCT TCCGCGGAGGCGGAGGACTATGACTCACCGGAAAGTGAGATCACTGATTCAGGTAACAATAAATTTCTCACTGATTTCAA TGTCATTCATGAATTGTGATCAATTTCTCACTTAAAATCAATTCAGAATTGATTGTGAAGTCAAAATCAATTACTATGTG ATGTGAAGAAGTAGTATCTGAATAGCTTCTAGTGTATTCAAACATTCATTTACTTTTGTTTTTTGTGCTTTGTTTTCCCA TGTGGAATTCAATGGCATGTTAACTGCTCTGTTTGTTTTTTTCTTTGGATTTTCAATTTGTCATTCAGTCTTGGGAATTC AGTTTTCAGATTAATCTTAATTACTTGTGTGTGGATTTGTTTTGTGAATGGGAAGAAAACTTGTGTGCAGATTGGAAGCA CAAACCTATTCCTTTTGTTTTTTATTTATTTATTAGAGAAAATATAAATAAATTTTTTATGAATGTTTAATTACTTAATC ATCTTTGAGTTTAATGGATATGCACTTACAGTGTAAAATATTTTTATACAGTCATCCAATCAAAGCATGCCACATAGGAG AGAGATAGTTACATTTGACTTTAATTTTAATTAAAAGAATAAGATATTTTCTGATTTGGCGGAATTCAATTGGATGTCTG TGTAAAACTATTTTACACTGTCAGTGCATATCCATTAAACTCATCATCTTTAATCTTTAATCTTAATTACTTTTGTTTTT TATTACATGAGTTCTCCTGTACATCCATGTTTAAGGGCGGTCCAAACCATCGCTAAAGTGTATGTCGAGTTCGGGAAAAT TCGTATGTTTAGTACCATTATTTTTCTTTAGTGAATCTCTTGAAAGGGGTAGATTTTTCATTTTCCCCCTTTAATTCCGG TTTTTGTGAAAATAATTTACTTCTTCCCCGGCTGTTTCTAGAAGAAATTGAAGCAGCCAATATCTGACATGAGAATTAGT TTTCCAATGTTTTATTATTATTTTTGAATTTTCTTCTTTGAAGTCAAATTTTTGTTGCTCAATGGTAGACCCATGATGTC GTTCAACATTCTTGATTCATTTGATTTCCACTACCCTATTTAATTTCCATTTGATTTTTAGTATTGAAGTATTTTGGTGC ATTTGGTGTAAAAATGAAAATATATACATTTTGATCTATTAAAAAAATTCATTCATTTTTTATCTCAAAATAAGTGTTAA TGTTGGTTAGCACTAATAATAACCGGTACTGGAACATAGTCATGGTTAGTTGTGGGGGCAGAGGCGAATGGCACAACGTT GAAGGAGGAGACACATTCTAGAGAAGTGTGCTATTTTTTTTTTTTAATTACAGGGAGCGGAAGCATCAAAGGCGCCTGCA TGATTCTGTTGTTGGTGTCACGTGCGTGGTTGCATCTAATGACACCTTAGCACGTGCGGGTTTTGGTTTAGGGTTCATAG GGTAGTTGGGCTTTGTCAAATTGGTGCTATTCCCTATGAAATACTCATACTCTCTCTGTTGAGTTTCCACCTGTTCAAGC TTGTGGGTCAACTCTGTCCTGCTATTAATGGGTGAAGGATCCGATGAATGCATTGCTTTATTGCTTTATGACTAGAAAAA TATTAAACATGTTTTCTCAGACGGATACAATAACGTGTGGTACCATTGTAGGACTATATAGTACTCTTTGTTTGTTTGTG TCTCAGTGTCTGCCAATTTTGTCACTATTAACTGGACGGCAAAGGTTTCTCAAAATTACACAGCAAAAAAGCTACTCATG TAATGGTCATTAAGACAATGCTGAAAGTAGAATTCCACAATTGCAAGTTACCTATGGCTTGCATTTTATAGTTTATCTTC TTAAAATTGGATTCTCTCCTATTGATGTTGACAGCACTATAGTCACAAATGTTGGTCTTTCAATCTTAATGTAAACTGTT TGATCTTAATCTTTAATCTGATAGTTCATATTTAGCTTGCAAACCAAGTATGTATCTTGTTCTGTAGTGGGAAGCTCTGT AATTACTTCCGGAGTGAAGTTACGAAGCATAACTTCTAGAGTTATCGTATTCTTCTGGATTGTGCAGTACCATTAATTCA AACACTCTACTAGTGATTCGGGTTCCCTGGTCACCTTGCATTTACTTGTTCAAGGGATCAGAGTCGTGTGATTGAGATTG CTCAGTTCATGTAATTCATCAAGATCAGATGATGATATAAGTTTAAAATCTATTGAATGACTCAGATTGCATGATTGCGT GTAATTAGGAAACCGGAGAAAATCTAAATCCCACTATTAGAGTGACTATAAGGTTAATTCCTTCCTTTTCTAAGTATTAA TTTAAATAATCAAATTTGTTTGAATCCAATTGGGCAATAACAACTAAGAATGTGTCTAATAATTTAAGAATCAAAGAGTG AATCATTGCTGTCAACTATAGTTGTCAACTATAGTTGTCAATATAATGTGTTGCATTTTAATGTGATGTTTGCTGAATGT TGAAATTTGCATGGTTTTCTTTGGCATGGTGTGCAGGATCTCAAGAGATGCATCCACCCTGTTTGATGAACATTAGTATA TGTTCCAATCATGAAGAATGTGAAGGACGCTATTCACAAATGAAGCTGCCAAAATTCTTCACAGCAAGGGATTCAGTGAA GGGGCACCCGGCAAGTTCTTTTGTTCACAAACTCAATGCATTGTTTTTAATAGAGGCCTGGGTTGAATTGATAGAACCGA TATCAATACTTTTTATAATAAGAAGCAGCTGGTTTTGCTCATTGGTGAATGATTGCAATTAGCAGGTGAATGTTGTGAAA GGATTGAAGTTGTATGAGGACATTTTTTCTGAATCAGAAATCTGCAAGCTATCTGATTTTGCGAATGAGATCCATGTTGC AGGACAGAACGGACAACTTTTAGGTAAATCACCATTAACTTATGTTTAGCTTCTTTACACCATGCTAATCAGTAATTTAT ACTGTATTTTGTTTGATTAATGCAAGACGCAGTGTTGTTAGCGGATATAGCGGGCGCTATAGCGTAACACTCTGAGGGCT CACCACTCTCCGCTATTTTCCGCTATGAAGGCTTGAAATAGCGGATTTTTAGCTTTCCGCAATTAACACCACTTGCAAGA TGTCCTATTGTCTCTTAGCTTAAACAAACAAACTAAATCTTCTGGAATAAATGTAGGTGAAACTTTCACACTGTTCAACC AGCAGGTGAAGGGGAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGAAAGATACATGGTGATGCCAAACGT AAGAAGAAATTACTGAGATTTGATAATTTGATAATCTTTCTTCACCTTAACAAAACTGTAATTAGGTACTTCTTTTCTGA GATATTGCAAAAAATGACTCACATCACATATTCTGATATATTCTGCTTCCATTTTTTTTACAGGTAATATAGAGCCAATT CCTCCATTTCTCCATAGTGTCATTGATCACCTTATTCAGTGGGACATAATTCAAGAGTACAAAAGGCCAAACGGTTGCAT CATCAACTATTTTGAAGAGGTAAGTATGCAATTTTTTCCTGATCACTTCACATAACCTTTATTAGACAAATATCATAAAA TTACTACAAGCATTTGTTTGTGCAATAGAGTAACCATTTAGTAATGTCTGTATGATTTTGTAATTTTTAGGGGGAATTTT CTCAGCCGTTCTTGAAACCACCACATTTGGATCAACCTCTATCCACTCTTCTTCTTTCTGAATCAACTATGGCATTTGGG CGTATCCTTGTGAGTGAAGATGAGGGGAACTACAAGGGTCCACTCATGCTCTCATTGAAGAAGGGGTATATAAAAAACAA CTTATAATCTTTGCAGCCCTAATCTTCCATTTATTTTTAAGATTCTACTAGTCACATTGCTGGATACCATGGCTGGATAC GTTTAACATTTATAGGACAGCATGTAAGTGAATAATGTGAAATGCAAATATGCTAGTTTAAAACATATATCAAGTTCTTC AACATTGAAAGTCTAAGTTTGAGATGTTCTTAAGGAATGTTAGATAGGGTGTGGTGATTCCACAAGTAGCTTCAGGGCAT TTCTGGGGCTGCAATCAAATATATGATGTTAGGATTGGCATTTGGCACCTAATTTGACATGACTCAGAAAAGTGATGATA GTTTTCCATTTTAGAATTTAACTTAGACCAATAATGTATATTACATTTCTTAAGTTGTTTTCTTTAGCTCAGTAAACTTG AGTATTTTACAGTACATGATTAGATGATGAAACACCTTGCAGGTCTCTTTTAGTAATGAGAGGACACAGTGTTGAAATGG CAAAGCACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCACCTTCTTCAGAGTGAAGCCAGACTCCAATCAATGC CAGTCACCAACTCCAACTATGACAACCGCGATGACTCTGTGGCAACCAGGCATTGCAAGCCCACTTGCATTGCCAAATGG AGCTCTAAGTGGCTATGAGGCTATGGATATGATGATGCACGAATGGGGAATGCTTGGTGCTCCAATGGTCATGCTAGCCC CTATGCTTCCAGGGGCGCTGAATGCAGACAAATTCCCTCTCGGTGGGACTGGGGTTTTCTTGCCTTGGACTGAGGCACCT AGAAAACAGCCAAGGCATCTTTCACCGCGTGCCCAGAGAGGAAGGGTTAGGGCATTGCCTCCCCCAGTTGAATCACACAT GGGAGAGTCCAGTTCTGAACCCAGCATTACCCTTGAAGGATAGGTATGACTTCAGTCTCAAAGCAGCCATGGGTTTAAAG AGAGGTGGTTATTTGCTCTAGACACAGGAGTATTTTATTTTGTTGTCCAAACTAGTCCTAGTGCTGCTAGAAGAGTTTGT TTCATTCATTTTTTGTCACCCCTTTCCTATTAGCTGCTTTTAGATAGATAAACTTAATTAGAAATCAGAATCTAGTGTTC ATTATACTTTAATGTGGTTTCAATAGTTTAAAGGCTATGGAGAAGTCTTATCTTCCAAAATTGAACAATGTGAATTATAT CAGAGGGTAGAATTTTGTGAGAATGATCATTTATATTTTCATTTTAGACAAATCAGATCATCTTGATGATGCATATGGTT ATAATCATGTGCTTAATTTTGTTATTATATACGATGATGAGTTAATCTTGTGGAATGGTTTGAGATTATCTTACAAATTT GTATAGACAAGTAGCCATTTCTGATTTCGATAATTACCAGTTGATACAGTTTCCATTGAGATAAATTAAAA
CDS sequence (LotjaGi1g1v0731100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCTGTTCCAGCAGCAACGCGGAGTGATCATCCACCGAAGACGCCGCCGCCGCAACCGGCACCGCCGGCGGTGCT GGTCTCCGACTCCTACGCTAAGGACGCCATCCTCGCTTGGTACCGCGGCGAGTTTGCTGCCGCCAACGCCATCATCGACG CCCTCTGCGGCCACCTCAAGGACCTCGCCGACCCCTCAGACTACGCTTCCACCTTCGCCGCCATCCACCGCCGCCGCTTC AACTGGATCCCCGTCATCCAGATGCAGACGTACCATTCCATCGCCGATGTCACACTCGAGCTTCAGAAGGTCGCCGAGAA TATGAAGCAGCGCGAAGGAGGGCGGAGCACCGGCGGCGAGAGTGAGTTCCATCCGAAAGTAAAGATCGAAGAGAAGGAGA AGGAGGTGCTGGTGGAGAATGTCGGAAATGGAGACGCCGTCGCGGACGCCGAAGCTTCCGCGGAGGCGGAGGACTATGAC TCACCGGAAAGTGAGATCACTGATTCAGGATCTCAAGAGATGCATCCACCCTGTTTGATGAACATTAGTATATGTTCCAA TCATGAAGAATGTGAAGGACGCTATTCACAAATGAAGCTGCCAAAATTCTTCACAGCAAGGGATTCAGTGAAGGGGCACC CGGTGAATGTTGTGAAAGGATTGAAGTTGTATGAGGACATTTTTTCTGAATCAGAAATCTGCAAGCTATCTGATTTTGCG AATGAGATCCATGTTGCAGGACAGAACGGACAACTTTTAGGTGAAACTTTCACACTGTTCAACCAGCAGGTGAAGGGGAA CAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGAAAGATACATGGTGATGCCAAACGTAATATAGAGCCAATTC CTCCATTTCTCCATAGTGTCATTGATCACCTTATTCAGTGGGACATAATTCAAGAGTACAAAAGGCCAAACGGTTGCATC ATCAACTATTTTGAAGAGGGGGAATTTTCTCAGCCGTTCTTGAAACCACCACATTTGGATCAACCTCTATCCACTCTTCT TCTTTCTGAATCAACTATGGCATTTGGGCGTATCCTTGTGAGTGAAGATGAGGGGAACTACAAGGGTCCACTCATGCTCT CATTGAAGAAGGGGTCTCTTTTAGTAATGAGAGGACACAGTGTTGAAATGGCAAAGCACGTAATGTGTCCATCCCCTAAC AGAAGGGTGAGCATCACCTTCTTCAGAGTGAAGCCAGACTCCAATCAATGCCAGTCACCAACTCCAACTATGACAACCGC GATGACTCTGTGGCAACCAGGCATTGCAAGCCCACTTGCATTGCCAAATGGAGCTCTAAGTGGCTATGAGGCTATGGATA TGATGATGCACGAATGGGGAATGCTTGGTGCTCCAATGGTCATGCTAGCCCCTATGCTTCCAGGGGCGCTGAATGCAGAC AAATTCCCTCTCGGTGGGACTGGGGTTTTCTTGCCTTGGACTGAGGCACCTAGAAAACAGCCAAGGCATCTTTCACCGCG TGCCCAGAGAGGAAGGGTTAGGGCATTGCCTCCCCCAGTTGAATCACACATGGGAGAGTCCAGTTCTGAACCCAGCATTA CCCTTGAAGGATAG
Protein sequence (LotjaGi1g1v0731100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAVPAATRSDHPPKTPPPQPAPPAVLVSDSYAKDAILAWYRGEFAAANAIIDALCGHLKDLADPSDYASTFAAIHRRRF NWIPVIQMQTYHSIADVTLELQKVAENMKQREGGRSTGGESEFHPKVKIEEKEKEVLVENVGNGDAVADAEASAEAEDYD SPESEITDSGSQEMHPPCLMNISICSNHEECEGRYSQMKLPKFFTARDSVKGHPVNVVKGLKLYEDIFSESEICKLSDFA NEIHVAGQNGQLLGETFTLFNQQVKGNKRELIQLGVPIFGKIHGDAKRNIEPIPPFLHSVIDHLIQWDIIQEYKRPNGCI INYFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILVSEDEGNYKGPLMLSLKKGSLLVMRGHSVEMAKHVMCPSPN RRVSITFFRVKPDSNQCQSPTPTMTTAMTLWQPGIASPLALPNGALSGYEAMDMMMHEWGMLGAPMVMLAPMLPGALNAD KFPLGGTGVFLPWTEAPRKQPRHLSPRAQRGRVRALPPPVESHMGESSSEPSITLEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| PANTHER | 6 | 537 | 532 | 2.6E-273 | – | |
| PANTHER | 6 | 537 | 532 | 2.6E-273 | – | |
| MobiDBLite | 11 | 25 | 15 | - | – | |
| MobiDBLite | 149 | 173 | 25 | - | – | |
| Gene3D | 205 | 419 | 215 | 9.0E-43 | ||
| SUPERFAMILY | 208 | 410 | 203 | 1.25E-11 | – | |
| ProSiteProfiles | 315 | 411 | 97 | 8.113 | ||
| Pfam | 319 | 409 | 91 | 7.8E-5 | ||
| MobiDBLite | 497 | 537 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0731100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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