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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0731400 |
| Transcript ID | LotjaGi1g1v0731400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT2G46370.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q60EY1|GH36_ORYSJ Probable indole-3-acetic acid-amido synthetase GH3.6; TrEMBL-Plants: tr|A0A151TUA6|A0A151TUA6_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.6; Found in the gene: LotjaGi1g1v0731400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130296568..130299741) extracted from Lotus japonicus Gifu genome v1.2.
GTGCATTTTTACAAGAGGCTGATTCTACATCTCCAACATGTACCTGCAAAGTCACATGACAATAACTAGTTGTCTAAGGC TCACCCTCAGCACATGGTATTATAAACTTAAGTATTATTATTAGTTCCTTCTATTAAAGTTCCTTTCTTACATTGAACAT CAACATAAAAGTCAACAGCTGCAAGCAACAAAATTAGCGCATGAAGTTTTGTTCTTGAACATCATCATAGAAGTTTTTGT TCTTGAACATCAACATAGAAAAACAAAGACATGATGACAGATGAAGAACTGATACAGAAGCTGGACGAGTCTACCAAAAA CGCCCAGCATCACCAATTGGAGACTCTCCGTTCAATCCTTCTTCACAATGGTAATGTAAGCTATCTCAAATCCTTCAAAC ACAAAGGGGACCCTTCTGATCCTGCAACTTTCACAAGGGTTGTGCCTTTGTCCTCCTATGAAGATTATGCTGACTATATC AACCAGATGGCAGATGGAAAAGAAGACAATCCTCATCATCATCACCCTCTTCTCTCTGTTGATCCTCCCCTCTGCTTCTT CTACAGGTGGAAATGTTAATATGTTTATCCCTCTTAACTCATCTCAAATTCTCATATCAATCATGCACATTCACTTACCC CTTGTTTGTGTTTTTTTCTTTCTCAGCTCAGGAACAACCTCTATGAAACCAAAATTGATCCCTTACTATGATTCAGACCT TTCCAAAGCTGCCTCCTTTATCGGTCACCGCGGCAGCATTGCTGTTCATCAGAGGTAAATTAACCAACAAAGTGTGGGTT TGGATTAGCGTTTGCAATTATTGATTATAATAAAAGTGAGTTGAAACTTGAAAGTGATGCAAGTTATGTTAGAATACATT TATGAAAAAATGATTTATTTTTGGATAATGTTATGGAATTCAGTTGTGAAATATCACAATTGATTATGTTCAACACATAA GCTACTCTCTCTAGCTTTTACCAAAAATCTAGAATTGATTTCCTCGTAAATGACTCACAAACATTAATATTTTCATCCAA AATTGATTTTACACTACCTGAATTGATTCTCGGGAAACCAAACACACTCTAAATTTCAATTCCAGTCATAGTTTTGAGGG GTCTCAGGTTTGATTATTTAACAAGATGTGTTTTTGAACCTCCTTGCAGATTGTTTCCTCCAAAGCCTGAAGTCAACAAG ATCCTCTGGTTTCTCTATGCTGACAACATTACTTATACTAAATGTGGCCTGAAGGTTATGGCGGCCTCTACATATTATTT TCAAAGTGGTAGTGCCACCCCTCAGCAACTTGCTGTATTTTCCAGTCCCTTAGAAGTTATTCTTGGATCTCATGTGGAGC ATCAAGTGTATTGCCACCTTCTATGTGGTCTTAGGAATCTGGATGTTATAGATGGAATTATGGCCCCTTATGCCATAGGT TTGGTTAAAGCATATGGTCTTCTAGAGTCCAAGTGGGAGCAACTATGTGATGATCTTGAACTTGGGATTCCAAGTTCGGC AATTTCAGATGTGGCAATGAGGGAAGCTGTGATCAATAAACTTGGTGGGGCTCAGCCAGAACTTTCAAAAAGAATAAGGT TAGCTTGTGAAGGTAAAAACTGGGAAGGGATTATACCTAGGTTGTGGCCGAATATTCGTTATATTAGGACTGTAACCACG GGAAGCATGAAACAGTACTACCAAAAGCTCAAGCACTATGCAGGAGAGGTTCCTATTCTAGGAGGAGATTACTTTGCTTC AGAATGCACCGTTGGTATAAATTTAGACATACTGCAACCTCCTGAGACAACACGATTTGTTATGCTTCCTACTGCTGCCT ACTTTGAGTTTCTTCCATTTGACATGAATGAGGATGTGGATGATGATGCTGGTGAAGAAACAGTAGACCTTAGCAGTGTG GAGGTTGGGAAGATGTATGAAGTGGTTGTGACTACTTATCGAGGATTCTATCGCTACCGGTTGGGCGACATAGTGAGAGT TGTTGGCTTCCATAATTCATCTCCACAAGTGGAATTTGTGATGAGGGCACCTAAAAGTCCTTCTGAGATTCTGACAGAGA AAGACTTGATTTTAGGAGTTGAAAACTTTCAACTTGCACTGAGTGGTGCTATGAGAATTGAGATTGTTGAGTATGCAAGT TTCTTGGATCAGGAGTCAAGGCCAAAGCAGTTGAATGTGTTTGTGGAAATCCAAGATGAGTCTAGTTTTCTGGAGGATAA AAGGGAGGAATCAGTTGCCATTTTCAAAAGTTGTGTTTCCTCTCTTGAGAGTGGATTCGGGGCTCTGTATAAGGTGCACA AGGATAAAGGTCACACAGGGAACTTAGTGATATTCATCATAAGGCCTGGAGCTTTTGATCAATTATCAGAATTAGCCATT AAGAGGGGAGCATCAGCTAGTCAATATAAGCCGCCCAAGATTATAAGGAATTATGAAGCTGTCAAATTCTTGAAACAATT AGCTTTTGTGACAATATCACTGGATGACTAATAACATGTGGTGAACAGATCAAAGCATGTTTGAAAATTCTTCTACAGTT GATTTTAAAGTCAAAATCAATTCTGGGAAGAAGCTTCTGTGACTAGCTAGCTTTTGGGAGCCAGAATTGATTCTAAGAAA TAAAAAGCGGATCCAAACATGCTATGAATTTGTAGTAGGACCTTTGTCCTACCCTCTGAAATTCAACTTTCTTGAGAACT GTTGATTTCAATCTATTCACATTTAGTAACATAATGTCTGCAAGGAGATTAGTTTCTTTTTAGAATAATAAAAATCTTGA AGATTGGGAACCATATTTAAAGTGCAACTGCAAATTCTACACTGCGCTTCGGAATACATTTCTTGAATGATTTACATGAA GACAACTAATGTGAAATATAAACCTTCATGAATTCAATCATCAATGTATAAGCAAACAAATGATAAACAATATGGCTAGT GATTTAATCATCAACCTGCTTCTATCTTTCTCTCCCACCACACACTGCGACCCGCTAAACTTTGCTTCCTACACATTAAT GGCTGATTGTAATTGTTCCAGGCTTTCACCCTTGGTTTCCGGCACGACTACAACTATAAATAGTATAGCTAGTGCATTTA TTGCAGCATAAAGAATGAAGGTACCTGAAATTCATAAATACAAGTAAATTTAGG
CDS sequence (LotjaGi1g1v0731400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGACAGATGAAGAACTGATACAGAAGCTGGACGAGTCTACCAAAAACGCCCAGCATCACCAATTGGAGACTCTCCG TTCAATCCTTCTTCACAATGGTAATGTAAGCTATCTCAAATCCTTCAAACACAAAGGGGACCCTTCTGATCCTGCAACTT TCACAAGGGTTGTGCCTTTGTCCTCCTATGAAGATTATGCTGACTATATCAACCAGATGGCAGATGGAAAAGAAGACAAT CCTCATCATCATCACCCTCTTCTCTCTGTTGATCCTCCCCTCTGCTTCTTCTACAGCTCAGGAACAACCTCTATGAAACC AAAATTGATCCCTTACTATGATTCAGACCTTTCCAAAGCTGCCTCCTTTATCGGTCACCGCGGCAGCATTGCTGTTCATC AGAGATTGTTTCCTCCAAAGCCTGAAGTCAACAAGATCCTCTGGTTTCTCTATGCTGACAACATTACTTATACTAAATGT GGCCTGAAGGTTATGGCGGCCTCTACATATTATTTTCAAAGTGGTAGTGCCACCCCTCAGCAACTTGCTGTATTTTCCAG TCCCTTAGAAGTTATTCTTGGATCTCATGTGGAGCATCAAGTGTATTGCCACCTTCTATGTGGTCTTAGGAATCTGGATG TTATAGATGGAATTATGGCCCCTTATGCCATAGGTTTGGTTAAAGCATATGGTCTTCTAGAGTCCAAGTGGGAGCAACTA TGTGATGATCTTGAACTTGGGATTCCAAGTTCGGCAATTTCAGATGTGGCAATGAGGGAAGCTGTGATCAATAAACTTGG TGGGGCTCAGCCAGAACTTTCAAAAAGAATAAGGTTAGCTTGTGAAGGTAAAAACTGGGAAGGGATTATACCTAGGTTGT GGCCGAATATTCGTTATATTAGGACTGTAACCACGGGAAGCATGAAACAGTACTACCAAAAGCTCAAGCACTATGCAGGA GAGGTTCCTATTCTAGGAGGAGATTACTTTGCTTCAGAATGCACCGTTGGTATAAATTTAGACATACTGCAACCTCCTGA GACAACACGATTTGTTATGCTTCCTACTGCTGCCTACTTTGAGTTTCTTCCATTTGACATGAATGAGGATGTGGATGATG ATGCTGGTGAAGAAACAGTAGACCTTAGCAGTGTGGAGGTTGGGAAGATGTATGAAGTGGTTGTGACTACTTATCGAGGA TTCTATCGCTACCGGTTGGGCGACATAGTGAGAGTTGTTGGCTTCCATAATTCATCTCCACAAGTGGAATTTGTGATGAG GGCACCTAAAAGTCCTTCTGAGATTCTGACAGAGAAAGACTTGATTTTAGGAGTTGAAAACTTTCAACTTGCACTGAGTG GTGCTATGAGAATTGAGATTGTTGAGTATGCAAGTTTCTTGGATCAGGAGTCAAGGCCAAAGCAGTTGAATGTGTTTGTG GAAATCCAAGATGAGTCTAGTTTTCTGGAGGATAAAAGGGAGGAATCAGTTGCCATTTTCAAAAGTTGTGTTTCCTCTCT TGAGAGTGGATTCGGGGCTCTGTATAAGGTGCACAAGGATAAAGGTCACACAGGGAACTTAGTGATATTCATCATAAGGC CTGGAGCTTTTGATCAATTATCAGAATTAGCCATTAAGAGGGGAGCATCAGCTAGTCAATATAAGCCGCCCAAGATTATA AGGAATTATGAAGCTGTCAAATTCTTGAAACAATTAGCTTTTGTGACAATATCACTGGATGACTAA
Protein sequence (LotjaGi1g1v0731400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMTDEELIQKLDESTKNAQHHQLETLRSILLHNGNVSYLKSFKHKGDPSDPATFTRVVPLSSYEDYADYINQMADGKEDN PHHHHPLLSVDPPLCFFYSSGTTSMKPKLIPYYDSDLSKAASFIGHRGSIAVHQRLFPPKPEVNKILWFLYADNITYTKC GLKVMAASTYYFQSGSATPQQLAVFSSPLEVILGSHVEHQVYCHLLCGLRNLDVIDGIMAPYAIGLVKAYGLLESKWEQL CDDLELGIPSSAISDVAMREAVINKLGGAQPELSKRIRLACEGKNWEGIIPRLWPNIRYIRTVTTGSMKQYYQKLKHYAG EVPILGGDYFASECTVGINLDILQPPETTRFVMLPTAAYFEFLPFDMNEDVDDDAGEETVDLSSVEVGKMYEVVVTTYRG FYRYRLGDIVRVVGFHNSSPQVEFVMRAPKSPSEILTEKDLILGVENFQLALSGAMRIEIVEYASFLDQESRPKQLNVFV EIQDESSFLEDKREESVAIFKSCVSSLESGFGALYKVHKDKGHTGNLVIFIIRPGAFDQLSELAIKRGASASQYKPPKII RNYEAVKFLKQLAFVTISLDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 579 | 578 | 1.8E-288 | – | |
| PANTHER | 2 | 579 | 578 | 1.8E-288 | ||
| Pfam | 11 | 562 | 552 | 5.2E-152 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0731400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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