Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0736600.2

Overview

Field Value
Gene ID LotjaGi1g1v0736600
Transcript ID LotjaGi1g1v0736600.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description N-acetyltransferase ESCO2-like protein; TAIR: AT4G31400.1 protein CTF7; Swiss-Prot: sp|A7UL74|CTF7_ARATH Protein CHROMOSOME TRANSMISSION FIDELITY 7; TrEMBL-Plants: tr|A0A1J7H5Z1|A0A1J7H5Z1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0736600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:131074930..131077093) extracted from Lotus japonicus Gifu genome v1.2.

CAACAGCATCGCTCGTTGCAGAACGAAGAACTGAAGAAGAGCCAATTCCATCGCAAATGCAGCCGAAGATCAACGCTTTC TTCAAATCTCCCTCTTCCTCCGCTCCCACATCCCTCTCCGACGATGACTTATCCGCCTGGGAGAACAAACAGCACCAAAT CTCCATCACCTACACCCGAAACCGCCACAAATCCACCACCGTCACTTCCCCTCCCAACCCGGAACCCACCGTAACCGGAA AACCCGTCGTCAAGAACAAGAAGAGGAGCTATGCCCAGTTCCACCTCGACTTCGGCCAATCCGACTTCCTTCTTCGCCGC TGCTCCACTTGCGGCGTCAAGTTCACCCCCGGCGACGCTGAAGACGAGAAATCACACAAGGAGTTTCACAATTCCTACAC CCAGGGGATCCAATTCAGAGTAACTTCTCCTGCTTTATTCAGCGTGATTCCCAATTTGTCTGATTCGATTCGATTTGATT TGATATGAGTCCTTATTTTCTGATTCTGTTTTTTAGGGTTGGACCAAGGAAAGGATTATCTCAGTGCCCACCGTCAAAGA GGATCGAATCGTTTTGGTCTTGGACAGCGATCCTTCTGCTCATAGGAACAAGGTTAGCTAGCTTCAATTTCAAATCCTTT TTTCAATAATTTTTCCTGCTTTTGTAGCTTTTGATTGAGAAATTGTTTCTGCTGATAGGTTGAACAAGTTGTGAAAATGA TGGAAATTGAGTTTGGAAGTGGATGGATAGTTCATCAACACTGTAAGGTGAATAATAATGCTTTCCTTGTTTGCTATTTA GATTGTGTGTCTGTGTTTGTAATTTGCTGAATTGAACCTAAAATATCAGGTTTTGTTAGGTTGTTATGTATTACTCATTG ACATGGAGGTATGTATATGTGTATACAGGTCTATCTGTTTGTTTCTCTTCAGAGGATTGTTGGGTGCCTGGTTGCGGAGC CAATCGAAGAAGCGTTCAAGGTTGTGTCTTGCTCGGATGCTGGGCATTCTGATGGTGTAAGGAGAAAGGAAAAGAAGTCA AGCTCAACCACTCTCCAGTTTGGGAATATTTTATTTCAAAGGGAAGTTGAAAAAAGAGCGGTGACCTTGAGTGGTTCTGA GGTGATGGATGCTGGGGCAATCTTCTGTGAGAATGAACCAGTTGCTGCTGTTTGTGGTATTAGAGCCATCTGGGTTACTC CCTCAAACAGGAGAAAACGCATTGCTAGCCAATTGCTAGATGCTGTGAGGTAAATTTGGGTTTACTTGTGTTTCTCGTAG GAAACTATAGCCAACCTTATATAATGAATTTTAACCTGAAAGAAAAGTTATCTGCTAAAACTTCATTTATGTTCTGCTCG AACTTGTCTTCAATGGCTTATGTAGACTCAGAACGTTGTTCCATTTTTAAAAGTTCCTCAAGTTTGTGTTCTTCCGGGGG CAGTAGGTACTGGAGTTGAATCTGCCAAATCCTAATTTCCCTCTAAGCTTCTCTGCAGGAAATAACATTAGTAATATCAT ATCTTTGAAGCTTTTAATACTAAATGCGTTGAATTTGAATTGATCGGTTGAATATTCTTCAATAGATTGTCAACTTATTG ATTCTCTTTTGTGCTGAATTCATGGCAGGAAAAGTTTCCGCTCAGGCTGTGAGCTTGAACATGCTCAGCTAGCATTCTCT CAGCCAACCTCAGCTGGAAAGGCATTAGCATCTAGTTACACTGGTACTGGATCATTCTTGGTGTATAAAGCCAATAAAAC AGAGGTGTAGAGAAAGAAAAATGAATACAACAAGTCATGTCTTGAAAATCTGGTGCATACCTCTCCACTGATGAATAGAA TGATGTTGTCCAAGTTCATTCAATGGAGTGATTTGTTATCTTTATCATCTTTTTGTGATGTTGGAGAAGATAGAGATTAA AGGAGAGTTGGAGAACTAAGATTAGAAACCAACAATTCCAAGGGAGCAGTGGCCTGCCTTATTATAGGTTGTGTAACTGG TAATTTTTTATAATCTTGTTGAAGTTCCATTCTTGTAGTGAGATTGCACTAATGATGTAACTAGATATAAGTTTAATATT GTGCAATTATATTTTGACTTTTCGATAGGTCTAAACATTGGATTTTTGGTTTAATCCTGTTACTCCGGATGAAATTTGTA AGAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0736600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGCCGAAGATCAACGCTTTCTTCAAATCTCCCTCTTCCTCCGCTCCCACATCCCTCTCCGACGATGACTTATCCGC CTGGGAGAACAAACAGCACCAAATCTCCATCACCTACACCCGAAACCGCCACAAATCCACCACCGTCACTTCCCCTCCCA ACCCGGAACCCACCGTAACCGGAAAACCCGTCGTCAAGAACAAGAAGAGGAGCTATGCCCAGTTCCACCTCGACTTCGGC CAATCCGACTTCCTTCTTCGCCGCTGCTCCACTTGCGGCGTCAAGTTCACCCCCGGCGACGCTGAAGACGAGAAATCACA CAAGGAGTTTCACAATTCCTACACCCAGGGGATCCAATTCAGAGGTTGGACCAAGGAAAGGATTATCTCAGTGCCCACCG TCAAAGAGGATCGAATCGTTTTGGTCTTGGACAGCGATCCTTCTGCTCATAGGAACAAGGTTGAACAAGTTGTGAAAATG ATGGAAATTGAGTTTGGAAGTGGATGGATAGTTCATCAACACTGTAAGGTCTATCTGTTTGTTTCTCTTCAGAGGATTGT TGGGTGCCTGGTTGCGGAGCCAATCGAAGAAGCGTTCAAGGTTGTGTCTTGCTCGGATGCTGGGCATTCTGATGGTGTAA GGAGAAAGGAAAAGAAGTCAAGCTCAACCACTCTCCAGTTTGGGAATATTTTATTTCAAAGGGAAGTTGAAAAAAGAGCG GTGACCTTGAGTGGTTCTGAGGTGATGGATGCTGGGGCAATCTTCTGTGAGAATGAACCAGTTGCTGCTGTTTGTGGTAT TAGAGCCATCTGGGTTACTCCCTCAAACAGGAGAAAACGCATTGCTAGCCAATTGCTAGATGCTGTGAGGTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0736600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQPKINAFFKSPSSSAPTSLSDDDLSAWENKQHQISITYTRNRHKSTTVTSPPNPEPTVTGKPVVKNKKRSYAQFHLDFG QSDFLLRRCSTCGVKFTPGDAEDEKSHKEFHNSYTQGIQFRGWTKERIISVPTVKEDRIVLVLDSDPSAHRNKVEQVVKM MEIEFGSGWIVHQHCKVYLFVSLQRIVGCLVAEPIEEAFKVVSCSDAGHSDGVRRKEKKSSSTTLQFGNILFQREVEKRA VTLSGSEVMDAGAIFCENEPVAAVCGIRAIWVTPSNRRKRIASQLLDAVR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 62 62 - –
MobiDBLite
mobidb-lite
1 55 55 - –
PANTHER
PTHR45884
34 290 257 4.2E-81 –
PANTHER
PTHR45884:SF2
34 290 257 4.2E-81
IPR033257
Pfam
PF13878
74 112 39 2.3E-15
IPR028005
Pfam
PF13880
262 290 29 2.6E-9
IPR028009

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000070
Biological process Mitotic sister chromatid segregation The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets.
Subterm of
Part of
GO:0007062
Biological process Sister chromatid cohesion The cell cycle process in which the sister chromatids of a replicated chromosome become tethered to each other.
Subterm of
Part of
GO:0016407
Molecular function Acetyltransferase activity Catalysis of the transfer of an acetyl group to an acceptor molecule.
Subterm of
GO:0045132
Biological process Meiotic chromosome segregation The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.
Subterm of
Part of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0736600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…