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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0737500 |
| Transcript ID | LotjaGi1g1v0737500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G05675.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8RX01|Y3567_ARATH BTB/POZ domain-containing protein At3g05675; TrEMBL-Plants: tr|I1JQ93|I1JQ93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0737500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131197314..131199628) extracted from Lotus japonicus Gifu genome v1.2.
TATTTTTTTTTTGTGTAGTTTTTATTTATTTAATTTGTAAATAAAAATTGTTATGGAGGTGTGCGGGTGCAGGGGAAGCC GTGAACCTGACTCCGTAATAGAATTGCCTTTCTTCATCCTCACCTCACCACACCACACCACACCACAGACTCACTCACTT TCCGCACTCTCCTTCATTTCGATTTCCAAAAACACCATAACCTAATTGCTCCCTCTCACCTTTCACAGGGATCCGGTACC GTTCTTCTTCTTTCACTTCATTCTAATTTCTTGCTACAAGATCCAATTGTTCTTGCTTATTCATTATCTTTTATAATTGC AGGTACTACTAGTATGATTCATGTGTAAAAGTAAAACACTTGATTTCAATGGACACAACTGCTGTGAGTTTTTATTTTCT TTCCCCTTTCACCAAATTTCACTAATAACTATTAGTATATCACTTTAAATAAATAAATAAATAGACTTCTATATGTTATC TTCAATTGGTTTCTTGACTATTCTAACTTGCATCAAATTTTCAATTATTTAACTGTAACTGTTGAATTGGAATGTGTCAA TAATCAACATGAACTATAGCTGACTTTAATCTTTTCCTGATTTCAATTATCACCTTTTAAATGTATAGTGGTGTGAGAGT GTCTCTTATGTTTAATTACATTATCCTATTTCATGAAGGTTAAAGAAGAAGAAAAGATTGCCTGCGTGATTGGGGACCGG TCAACTAGCGATGTTGTTGTGAGGCTACGCACCAAGGAAGGTCGAGATGATTGGCTGTATTGCCACTCTGAGATTCTTGT GAAAAACTCCAAGTTCTTTGCTGAAAGGCTGTCTGAGAGCTGGCCGACTTTAGCGATCATTGATTCGCGAAACTGCGTTG ATGTGTATTGCCAAGAATCGAATTTTGATCACCATGTTAATCTTGTTCGCCTTCTCTACGTTGTCATAGATGGTTCAGTT GATGATTTGTGGCATGGTGTTAGAAATGCCTTAGGAATTATCCAGGTGGCGGTTGAGCTTGGATGCCAACAGATTGTCAC TGCTTGTGTGAGCTACTTAGAAGCGGTCGCGTGGGAAGAGGCTGAGGAGGAGGAGATATTGAAAATTGTTCCTCAAATGG GATTACAAGCTGAGCCTATCTTAGCTAGACTTCAACCAGTAAAACATTCAGCTCTTGTTAATGTCTTTCTCTCAGCCGTC CGCTTTGCTACATCTTCCCCTCCGCCATCAATGAATGATCTGAAATCTTCAGTGCAGGAGCAGCTTGAGTACATGCTAAC TGAAGATGATGATGACAGTCCTTTGGTGACAGCTGATGACAGCATAAAAATTGAGGTAAAAGAATGTGTAAACAAACTAA TTTCCAGGTTTAACAGCTCATTAATAGCTTTATTCTGTGGTTCCACAGAATCACTTTCTGAGGCAGGGAATACCCAGTTG TTTCAATCCTATTTGACTGATTTGTTGTGGGCTTGTCAGATATTGAGTAAGTTGGAAATAATGAGAGAATTTGTTGAGTA TTGGTTTGATGCATCAGAAAAGATCATCAGGGTACTTGAGCAAGGAAGTTCAACAACTGAAGTCATTGAGATAAAGCTGC GAGCCGTTGAGGTTACATCAAAGGTTCTAGAGGCAATTGGATATGGTGTTGTTACATTGCCAACTGTGAAACGACTTCAT GTTTTGAAATTGTGGCTTCCATTTGTGAGGGTTACCAAACCATTGGTTGACTCCGCCTCAATGAACTCTGAGAGTGATGT GTTGCTTAAAATAGATGGCGATTTGTGGCAACTCCTGGAATCCACTTTTGTTTCAATCATTCTTGCATTGCCATCAGGAG ATCAGGCAGAAGTTTTCACTGAATGGTTGGAAAATGAGTATATCCGGTATCCAGACTTAACTGAGGCATTTGATGTATGG TGTTATAGGTCCAAGGTTGCTAAGAGAAGATTATCATCACTAGGGGATGCGCATTCCATGATCAACTCTGTTCCTTAATA TTAGATGACTAATCCAAGATAGGAACCTAGTCAAAGGCATAAGACACATCTTCTCTTTGTTTGCAAGTCAAAGGAAATTT TTGTTGGAGGCATCCAGATCATGTTCATCCTCTCAATTCAATGTAAATTGTGTTGAAGAGTTGTAAAACATTGTTGTAGT TCTAACTCTGAACTGTAGAGAATGTATTTTTTTGAAAGGGTTGATTTCAGAGCAACCAAAATCATGCATAACTGACTTAA GGATAATATAGTTGAAAATTGTGTGTGAGCTTGTGGTGCAGAGTTTGTGTAGCAGGTAGGAAGATTGAAATGCAA
CDS sequence (LotjaGi1g1v0737500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACAACTGCTGTTAAAGAAGAAGAAAAGATTGCCTGCGTGATTGGGGACCGGTCAACTAGCGATGTTGTTGTGAG GCTACGCACCAAGGAAGGTCGAGATGATTGGCTGTATTGCCACTCTGAGATTCTTGTGAAAAACTCCAAGTTCTTTGCTG AAAGGCTGTCTGAGAGCTGGCCGACTTTAGCGATCATTGATTCGCGAAACTGCGTTGATGTGTATTGCCAAGAATCGAAT TTTGATCACCATGTTAATCTTGTTCGCCTTCTCTACGTTGTCATAGATGGTTCAGTTGATGATTTGTGGCATGGTGTTAG AAATGCCTTAGGAATTATCCAGGTGGCGGTTGAGCTTGGATGCCAACAGATTGTCACTGCTTGTGTGAGCTACTTAGAAG CGGTCGCGTGGGAAGAGGCTGAGGAGGAGGAGATATTGAAAATTGTTCCTCAAATGGGATTACAAGCTGAGCCTATCTTA GCTAGACTTCAACCAGTAAAACATTCAGCTCTTGTTAATGTCTTTCTCTCAGCCGTCCGCTTTGCTACATCTTCCCCTCC GCCATCAATGAATGATCTGAAATCTTCAGTGCAGGAGCAGCTTGAGTACATGCTAACTGAAGATGATGATGACAGTCCTT TGGTGACAGCTGATGACAGCATAAAAATTGAGGTAAAAGAATGTGTAAACAAACTAATTTCCAGGTTTAACAGCTCATTA ATAGCTTTATTCTGTGGTTCCACAGAATCACTTTCTGAGGCAGGGAATACCCAGTTGTTTCAATCCTATTTGACTGATTT GTTGTGGGCTTGTCAGATATTGAGTAAGTTGGAAATAATGAGAGAATTTGTTGAGTATTGGTTTGATGCATCAGAAAAGA TCATCAGGGTACTTGAGCAAGGAAGTTCAACAACTGAAGTCATTGAGATAAAGCTGCGAGCCGTTGAGGTTACATCAAAG GTTCTAGAGGCAATTGGATATGGTGTTGTTACATTGCCAACTGTGAAACGACTTCATGTTTTGAAATTGTGGCTTCCATT TGTGAGGGTTACCAAACCATTGGTTGACTCCGCCTCAATGAACTCTGAGAGTGATGTGTTGCTTAAAATAGATGGCGATT TGTGGCAACTCCTGGAATCCACTTTTGTTTCAATCATTCTTGCATTGCCATCAGGAGATCAGGCAGAAGTTTTCACTGAA TGGTTGGAAAATGAGTATATCCGGTATCCAGACTTAACTGAGGCATTTGATGTATGGTGTTATAGGTCCAAGGTTGCTAA GAGAAGATTATCATCACTAGGGGATGCGCATTCCATGATCAACTCTGTTCCTTAA
Protein sequence (LotjaGi1g1v0737500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTTAVKEEEKIACVIGDRSTSDVVVRLRTKEGRDDWLYCHSEILVKNSKFFAERLSESWPTLAIIDSRNCVDVYCQESN FDHHVNLVRLLYVVIDGSVDDLWHGVRNALGIIQVAVELGCQQIVTACVSYLEAVAWEEAEEEEILKIVPQMGLQAEPIL ARLQPVKHSALVNVFLSAVRFATSSPPPSMNDLKSSVQEQLEYMLTEDDDDSPLVTADDSIKIEVKECVNKLISRFNSSL IALFCGSTESLSEAGNTQLFQSYLTDLLWACQILSKLEIMREFVEYWFDASEKIIRVLEQGSSTTEVIEIKLRAVEVTSK VLEAIGYGVVTLPTVKRLHVLKLWLPFVRVTKPLVDSASMNSESDVLLKIDGDLWQLLESTFVSIILALPSGDQAEVFTE WLENEYIRYPDLTEAFDVWCYRSKVAKRRLSSLGDAHSMINSVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 9 | 155 | 147 | 1.2E-6 | – | |
| PANTHER | 10 | 434 | 425 | 1.2E-196 | – | |
| PANTHER | 10 | 434 | 425 | 1.2E-196 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0737500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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