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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31060
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.024s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0094929.2
n.a. PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Glycine max] gi|356517708|ref|XP_003527528.1| chr0 39956825 39959522 +
1 domain prediction
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Lj1g3v1306850.1
n.a. PRLI-interacting factor G [Medicago truncatula] gi|357464647|ref|XP_003602605.1| chr1 15745863 15747795 -
1 domain prediction
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Lj1g3v4752500.1
n.a. PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Glycine max] gi|356505437|ref|XP_003521497.1| chr1 56717536 56719211 -
1 domain prediction
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Lj1g3v4752500.2
n.a. PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Glycine max] gi|356572619|ref|XP_003554465.1| chr1 56717536 56718138 -
1 domain prediction
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Lj2g3v1828490.1
n.a. PREDICTED: BTB/POZ domain-containing protein At3g50780-like [Glycine max] gi|356496818|ref|XP_003517262.1| chr2 27473150 27477070 -
1 domain prediction
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Lj3g3v3117670.1
n.a. PREDICTED: BTB/POZ domain-containing protein At5g60050-like [Glycine max] gi|356544638|ref|XP_003540755.1| chr3 38964132 38966325 +
1 domain prediction
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Lj3g3v3348620.1
n.a. PREDICTED: BTB/POZ domain-containing protein At1g63850-like [Glycine max] gi|356538775|ref|XP_003537876.1| chr3 41120465 41126859 +
1 domain prediction
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Lj4g3v0901360.1
n.a. PREDICTED: BTB/POZ domain-containing protein At3g50780-like isoform X1 [Cicer arietinum] gi|502153123|ref|XP_004509225.1| chr4 13460424 13463976 +
1 domain prediction
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Lj4g3v2976850.1
n.a. PREDICTED: BTB/POZ domain-containing protein At1g63850-like [Cicer arietinum] gi|502139213|ref|XP_004503685.1| chr4 39384827 39388816 +
1 domain prediction
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Lj4g3v2976860.1
n.a. PREDICTED: BTB/POZ domain-containing protein At1g63850-like [Glycine max] gi|356527650|ref|XP_003532421.1| chr4 39386392 39389177 +
1 domain prediction
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Lj6g3v2218160.1
n.a. Uncharacterized protein isoform 4, partial [Theobroma cacao] gi|508706868|gb|EOX98764.1| chr6 25662724 25664496 -
1 domain prediction
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LotjaGi1g1v0318900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT2G13690.1 PRLI-interacting factor; Swiss-Prot: sp|Q9SKH2|Y2369_ARATH BTB/POZ domain-containing protein At2g13690; TrEMBL-Plants: tr|G7JBJ6|G7JBJ6_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi1g1v0318900 LjG1.1_chr1 76796723 76799683 -
2 domain predictions
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LotjaGi1g1v0737500.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G05675.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8RX01|Y3567_ARATH BTB/POZ domain-containing protein At3g05675; TrEMBL-Plants: tr|I1JQ93|I1JQ93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0737500 LjG1.1_chr1 131197314 131199628 -
2 domain predictions
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LotjaGi2g1v0366000.1
n.a. BTB/POZ domain-containing protein; TAIR: AT5G60050.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9LVG9|Y5600_ARATH BTB/POZ domain-containing protein At5g60050; TrEMBL-Plants: tr|A0A0L9V6Q7|A0A0L9V6Q7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0366000 LjG1.1_chr2 86354583 86358634 +
2 domain predictions
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LotjaGi2g1v0395700.3
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|V7CHN2|V7CHN2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700 LjG1.1_chr2 89317847 89320910 -
2 domain predictions
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LotjaGi3g1v0507900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|I1LJD8|I1LJD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0507900 LjG1.1_chr3 92490995 92495102 +
2 domain predictions
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LotjaGi4g1v0113900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16427027 16431578 +
2 domain predictions
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LotjaGi4g1v0113900.2
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16428000 16430996 +
2 domain predictions
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LotjaGi4g1v0429200.1
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338541 80342781 +
2 domain predictions
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LotjaGi4g1v0429200.2
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338870 80340995 +
2 domain predictions
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LotjaGi4g1v0429200.3
n.a. BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|A0A151TF23|A0A151TF23_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0429200 LjG1.1_chr4 80338874 80340995 +
2 domain predictions
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LotjaGi6g1v0352100.1
n.a. BTB/POZ domain protein; TAIR: AT5G64230.1 1,8-cineole synthase; Swiss-Prot: sp|A5DSS4|LKHA4_LODEL Leukotriene A-4 hydrolase homolog; TrEMBL-Plants: tr|G7INX2|G7INX2_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66424586 66443374 -
2 domain predictions
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LotjaGi6g1v0352100.3
n.a. BTB/POZ domain protein; TAIR: AT5G64230.1 1,8-cineole synthase; Swiss-Prot: sp|A5DSS4|LKHA4_LODEL Leukotriene A-4 hydrolase homolog; TrEMBL-Plants: tr|G7INX2|G7INX2_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi6g1v0352100 LjG1.1_chr6 66437468 66443203 -
2 domain predictions
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