Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0746300.1

Overview

Field Value
Gene ID LotjaGi1g1v0746300
Transcript ID LotjaGi1g1v0746300.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C family protein; TAIR: AT1G09160.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|O80492|P2C05_ARATH Probable protein phosphatase 2C 5; TrEMBL-Plants: tr|V7D296|V7D296_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0746300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:131941230..131946465) extracted from Lotus japonicus Gifu genome v1.2.

GACCATGTCAATGAGGATTCCTTTGCCAAACAAACTAAAAGACCTTCTTCTTTTTCTTTACTTCTTTACTTTCTCTCTAC CAATCAAATCACAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCTCTGCTCATTGTCTCTAG TTTTAGGGTTTATCGCCATTTGATCTTCAGCTCTCTCCGTCCAAATCACCATCTCCATTGCTTCTACAATCCAATTGCCA GTGCGCATGCTTCTCCCAATCTGCAATGTAGCTGAATCTCACCACTGTTAGTCTCACTTTTCCCCTAATTTCAATTCCAG TTGACTTTCTTCAAATGCAGATTTTCATGCTTCTACGATCCGTATTCTAGATTTCATCGATTCATGAGTAGATCTTTTGC TTATAAATATTTAATTCACTGAATCGTGCACCAGAAATTGTTTTGGATTTTTGTTCAATTTTGTTCTGAATTCAATTGCA TGTTATGTTATGCAGGGTTTCTTCTTCTTCTCTAGAAATGTTGAATTCTGAAGTGAGATGATGAACAAGAGTGAATTGTC GTCCACGAGGATGAAGCCGCCACCAGTTCCATTGGCTACTCTGATTGGCCGTGAGCTTCGACATGAAAAAGTTGAGAAAC CTTTTGTCAAGTATGGCCAAGCTGGCTTGGCTAAGAAAGGAGAAGATTACTTTCTCATCAGGACAGATTGTCACAGGGTT CCTGGGGATCCATCAACCGCGTTTTCGGTCTTCGCGGTATTGTTTCTCTTCTTGATTATTTAACTTGATTAACAATGTCT TTAGTGGAATGTTTGGAGAGTGAAATTTAATGTTAGGAAGTGGAGTATATAGCCTAGAAGCTAAGACTGAGTTGGTAGCT TGGTTCTACAAAGTGGTGGGAATTTTGTTTCCCAGGGTTAATAGATTTCAAATGATTCTTTACATTTGCTCAATTATCAA GTGGTGCATTAATTTATTCCCATAATGGTTATGATAATCCATAAGGAATTCTTGATTGGCAGATATTTGATGGGCATAAT GGTATATCAGCTGCTATTTTCGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCACAAGATATCAGCAGGGA TGCGTGGCTGCAGGCCCTTCCTCGTGCTCTAGTTGTTGGCTTTGTGAAAACTGACACAGAGCTTCAACAAAAGGGTATCT ACATAATCTTCCTTGCTTACGTCATTGACCTTCCGTGATTACTTATGCAGTTATGCTGATAATTTAATTTCATCTTCAGG GGAAACCTCGGGAACTACAGCTACATTTGTTCTAGTTGATGGATGGACTGTCACAGTTGCATCTGTTGGAGATTCTCGTT GCATATTAGACACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAG CGTGTTACTGCCAGTGGTGGTGAAGTTGGAAGACTCAATGTATATGGAGGCAATGGGGTATGATGAAATCACTTTCACTC GTTCTAATGGTTGGTGCTTATACTCATTAGTTTTGGTTCACAAATATGTTTATAGGTAGGGCCTCTGCGCTGCTGGCCTG GTGGATTGTGCCTATCTAGGTCAATAGGTGACACAGATGTGGGAGAATTTATTGTGCCAATACCACATGTCAAGCAAGTG AAAGTGAGTTGGTGTCATATTATGTTGTTTGTTTGCTGACCTTTTTATGTGGAAGCATTCAGTTACAATTTACAACGCTC ACAAACATTTATCTATTGATTCCTCAGCTTTCAAATGCTGGTGGAAGGCTCATTATAGCCTCTGATGGTATTTGGGATGC TTTATCTTCTGACATGGCTGCTAAGGCATGTCGGGGTCTTCCTGCAGAGCTTGCTGCGAAGCTAGTGGTTAAGGTGATGA TAAATTCTGGTACCCTTCCCACATTTTGACGAATGGATATCCAATGAACTTATTTAGTGAGTGCTTTGTTCTTTTTCCCC AGGAAGCTCTAAGATCGAGAGGCCTGAAGGACGATACAACCTGCCTTGTTGTAGATATTATTCCTTCCGATCTTCCTGTA ATATCGCCAACTCCAAGAAAGAAACATAACTTCCTAACTTCACTTCTCTTTGGAAAGAAATTTGGCAACTCTACAAACAA AGCTACTAGTAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGCTCTGCAATGCTTGCAGAAAGGTACA TTCTGGAGCCCTGCTATACTTATATTGCTTTCTATGTCTTGAAGTATCATAGCAAGTTAGCAACTTATCTTAATACCTCC CAGGTTCACGTCTGTGACAAACGACTGGAATTAAGTGGTTTCTTTGTCCATTTGGGTTTATACTCGTGTGAAACTCAATA AGCTCCCTATTTTGTTAAAATGCAGGCTGGGTAAGGATTTCCCGTTAGATAAAAATTCTGGGATTTTCCGCTGTGCTGTT TGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAACTCCGGGCCTTTTTTCTCTCCAGCATCCAAGCCATGGGA AGGCCCATTTCTCTGCACAAACTGCCGGAAGAAAAAAGATGCCATGGAAGGAAAAAGGCCCAGCAGTCCCACCGTTACAG CATAGTAATTATCAAGTATTATAGTTGTTCTTAGTAAATATCTGTATCATTTTTCCCTGGCAGTGTGAGCATGCTTAATT TTTACACTTCCGTTGGTGATTGTGTGTAAGAAATGAGGTTGAGATAGGTTTAGTATAACTTTGATTTTTACAAGTTTGAT TCTGGCTTGTGCTCAGCTGTTGGACTGACAGACAGAACAAACGTGCTGTCTAGTAGATAAGCTCTAATGGTATGTGCTAA CGTCTTGTATTTGTAAGTATACTGAAGCTTTTAAGGCTATCTCTCTCTTGAGAGCTTCAGTGGTAAACAGTCTAATTGCA TCTGTATCTTCTGAATTTGTTTGACACACTAAGAATGTTTCAAATGTCTCTGAATACCACAATTCTGCGAGTCTGCGACC ACGCCCTCATCCCCCTATCATGCATAATGGACTGTCTATCTTCCTGATTGATGTAATTCAGTGCTATGTTGTATTGCTCT CATTAGGGTTTGTCTATCTTTATTCGCAAGTGTCCTTTGGCCTGTTTAAAAACTGCAAATAAATGCTTATAGAAAAATTG TCTCATTTAGTGGATGCTTCATATGCTGTTGGGAATTGCTTCTGAACACTTTAGACAACTCTTATTTTTTAAGCTTATGA TGACATTAACAGTTTAAAACTTTTTTGTAAGGCACTTATCAAATTCAATTTGATTAAAATAGTAAAGATATGGTTTCAAT TATGTTCAAACTTCAAAAGAGGATTATGCACAAAAGTCATATGCTCGGAAGCTAAGTACTTGGGAAATGTAATTTGAATG CCAAGATATGTAGAAACTTAGATAGCGAAGGGTGAGCACATGAGAATCAATCCTCTTAAGTGGCATTTTCAAAATTGAGT ACACTACTATGAGAGATGAGATTAGATTTTGCATACCTTGAAGCAAATCCAAACATGCAAAATATTTGTTTTTTCAAGTT GTGGAGTGTTAGTTTGAGTCAGCAGGCTAGCCAGAGAATCTCTGCAGTCCTATGATGCTAAGCATACTGCTGCTGGTTGT CGGGCTAGAATGACCCGTGTATTTGTGGGCTTTATGCCTTGTACTTCATGGCCTTCGGGCCCGTTCTTTGTTAATCCAAG AACAAAGAACCATTGACCAAAAAAAAAGTTGTGGAGTGTTCTTTCTAGTTAGAGCGTGTTTGGTTCCATATTTATAAGTA TTAGCACTGATTCTCCTCTATGGCAACAATTTTTTTAGAGTTTAGATGTTTTATTTCACAATTAATTACAGCCCCAAAAG GAATTATGTGATAAAGCTACAAATCTTAGCTTCCTCAATGAATAAGTGTATTCAAAGATAAATCACTTTACTTTCAACTC ATTTTTATCATAAGCAATGTTTGAAAAATTATATATGAGAATGTTGATTCAAACACACTTAAAATTATTTATGAGAATGT TGATTCAAACACACTTAAATAGGTGGCAAATGATGAAGGAGGATTAATGGCGGAAGTTTGTGCAAGTGCGAAAGTATCAA GAAACACATCTAATGAACAGTTTATTATATGCATGGAAAAGAACACGAAATAGTAGAAAAGCTATCCTTATTTAGACAAG AACAAAGCAAACAAGCAATCTTGGGACAGAAAACCAAACCAAAACTTAAACTTGGAAAATAACAGGAGAGCTTAACACAA ACTTATAGGTGATCTACAAACAAGAGCATACATTATCTGTGACCTACACTTCTTGAAAGGGAAAGCTCAACAAACTCACG ATATTATGACACCATGAACATGCAACTTTGTCAGGTCGGAGGGAGCCATTGCAGCTCAATCCCATATTTCCAAGAATCAA GAGGATCACTAGACTTGAAATCCACCAAACAAGTATAGGCAGTGCAGGTCCCAACCCTGACTCTGATCTTATGGGAATTC ATGGCAGAGTCTTTCAAGAAATGGCAACAAAGGGTATCCACACACCCACTTCCCTCCTCCACCTTTTCTTCAAACTGCCT ACAGATGCTGTTTGAAGAACAGTTCAGAGGAGACAAGAGGATATTATCAGAGCAATTAAACAACATGACAGTGTTGTGTG TAGATATATTGAAGGGTAAGCTTTCATCAAGCACAAATCCTCCCATTTTGAGATCAGAAGAATAACAAGTGTGTTTCTGT ATGAGGGGTGGGGTAATGACAAGCTTGTTAGCACTTGGGTCAATTCTAAGGATCTTGTAGTAAGTTCCTGTGGCTGACAA GAACTCTAACCTGCCATTATTGCAGTAAACTTTGTACCTTTTGTCACCACAATCCTCATTAGTGCTGAGGGGATATGGAA CCGCAGTGTTACCACAATTTGAACACGCATTAAAGGCTGATGAATTGATAACTTGAACAAGACCAGTTAGTAGAATGAGT ACAAGGGCTACCATATTTATTCAAAGGATATATCGAGCAAGGAAGATTTATATCCCTTGATCAGGAAATGTGGCCTATTT ATAATACATCAAATGTCACAAATTTCTGTTTGGGTCCAAGAGTTTCTGCTTAAAAGTTAAAACAAGTATTTTTATAGTAA AAGGTTTCTGAGATAATGATGGTTACTTCTGCACCG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0746300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGAACAAGAGTGAATTGTCGTCCACGAGGATGAAGCCGCCACCAGTTCCATTGGCTACTCTGATTGGCCGTGAGCT TCGACATGAAAAAGTTGAGAAACCTTTTGTCAAGTATGGCCAAGCTGGCTTGGCTAAGAAAGGAGAAGATTACTTTCTCA TCAGGACAGATTGTCACAGGGTTCCTGGGGATCCATCAACCGCGTTTTCGGTCTTCGCGATATTTGATGGGCATAATGGT ATATCAGCTGCTATTTTCGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCACAAGATATCAGCAGGGATGC GTGGCTGCAGGCCCTTCCTCGTGCTCTAGTTGTTGGCTTTGTGAAAACTGACACAGAGCTTCAACAAAAGGGGGAAACCT CGGGAACTACAGCTACATTTGTTCTAGTTGATGGATGGACTGTCACAGTTGCATCTGTTGGAGATTCTCGTTGCATATTA GACACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTTAC TGCCAGTGGTGGTGAAGTTGGAAGACTCAATGTATATGGAGGCAATGGGGTAGGGCCTCTGCGCTGCTGGCCTGGTGGAT TGTGCCTATCTAGGTCAATAGGTGACACAGATGTGGGAGAATTTATTGTGCCAATACCACATGTCAAGCAAGTGAAACTT TCAAATGCTGGTGGAAGGCTCATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGACATGGCTGCTAAGGCATG TCGGGGTCTTCCTGCAGAGCTTGCTGCGAAGCTAGTGGTTAAGGAAGCTCTAAGATCGAGAGGCCTGAAGGACGATACAA CCTGCCTTGTTGTAGATATTATTCCTTCCGATCTTCCTGTAATATCGCCAACTCCAAGAAAGAAACATAACTTCCTAACT TCACTTCTCTTTGGAAAGAAATTTGGCAACTCTACAAACAAAGCTACTAGTAAGCTTTCTGCAGTTGGTGTTGTGGAGGA GTTATTTGAAGAGGGCTCTGCAATGCTTGCAGAAAGGCTGGGTAAGGATTTCCCGTTAGATAAAAATTCTGGGATTTTCC GCTGTGCTGTTTGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAACTCCGGGCCTTTTTTCTCTCCAGCATCC AAGCCATGGGAAGGCCCATTTCTCTGCACAAACTGCCGGAAGAAAAAAGATGCCATGGAAGGAAAAAGGCCCAGCAGTCC CACCGTTACAGCATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0746300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMNKSELSSTRMKPPPVPLATLIGRELRHEKVEKPFVKYGQAGLAKKGEDYFLIRTDCHRVPGDPSTAFSVFAIFDGHNG ISAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDTELQQKGETSGTTATFVLVDGWTVTVASVGDSRCIL DTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVYGGNGVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKL SNAGGRLIIASDGIWDALSSDMAAKACRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVISPTPRKKHNFLT SLLFGKKFGNSTNKATSKLSAVGVVEELFEEGSAMLAERLGKDFPLDKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPAS KPWEGPFLCTNCRKKKDAMEGKRPSSPTVTA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF618
2 378 377 5.7E-168 –
PANTHER
PTHR13832
2 378 377 5.7E-168
IPR015655
SMART
SM00332
26 298 273 9.9E-62
IPR001932
Gene3D
G3DSA:3.60.40.10
32 303 272 3.5E-57
IPR036457
ProSiteProfiles
PS51746
35 300 266 37.069
IPR001932
SUPERFAMILY
SSF81606
40 300 261 6.15E-52
IPR036457
CDD
cd00143
46 300 255 1.29144E-62
IPR001932
SMART
SM00331
53 300 248 3.6E-4
IPR001932
Pfam
PF00481
65 283 219 9.1E-34
IPR001932

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0746300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…