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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0746300 |
| Transcript ID | LotjaGi1g1v0746300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C family protein; TAIR: AT1G09160.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|O80492|P2C05_ARATH Probable protein phosphatase 2C 5; TrEMBL-Plants: tr|V7D296|V7D296_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0746300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131943758..131945925) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACAAGAGTGAATTGTCGTCCACGAGGATGAAGCCGCCACCAGTTCCATTGGCTACTCTGATTGGCCGTGAGCTTCG ACATGAAAAAGTTGAGAAACCTTTTGTCAAGTATGGCCAAGCTGGCTTGGCTAAGAAAGGAGAAGATTACTTTCTCATCA GGACAGATTGTCACAGGGTTCCTGGGGATCCATCAACCGCGTTTTCGGTCTTCGCGGTATTGTTTCTCTTCTTGATTATT TAACTTGATTAACAATGTCTTTAGTGGAATGTTTGGAGAGTGAAATTTAATGTTAGGAAGTGGAGTATATAGCCTAGAAG CTAAGACTGAGTTGGTAGCTTGGTTCTACAAAGTGGTGGGAATTTTGTTTCCCAGGGTTAATAGATTTCAAATGATTCTT TACATTTGCTCAATTATCAAGTGGTGCATTAATTTATTCCCATAATGGTTATGATAATCCATAAGGAATTCTTGATTGGC AGATATTTGATGGGCATAATGGTATATCAGCTGCTATTTTCGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATA CCACAAGATATCAGCAGGGATGCGTGGCTGCAGGCCCTTCCTCGTGCTCTAGTTGTTGGCTTTGTGAAAACTGACACAGA GCTTCAACAAAAGGGTATCTACATAATCTTCCTTGCTTACGTCATTGACCTTCCGTGATTACTTATGCAGTTATGCTGAT AATTTAATTTCATCTTCAGGGGAAACCTCGGGAACTACAGCTACATTTGTTCTAGTTGATGGATGGACTGTCACAGTTGC ATCTGTTGGAGATTCTCGTTGCATATTAGACACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTGGAAG AGAATGCAGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGTGAAGTTGGAAGACTCAATGTATATGGAGGCAATGGGGTA TGATGAAATCACTTTCACTCGTTCTAATGGTTGGTGCTTATACTCATTAGTTTTGGTTCACAAATATGTTTATAGGTAGG GCCTCTGCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGGTCAATAGGTGACACAGATGTGGGAGAATTTATTGTGCCAA TACCACATGTCAAGCAAGTGAAAGTGAGTTGGTGTCATATTATGTTGTTTGTTTGCTGACCTTTTTATGTGGAAGCATTC AGTTACAATTTACAACGCTCACAAACATTTATCTATTGATTCCTCAGCTTTCAAATGCTGGTGGAAGGCTCATTATAGCC TCTGATGGTATTTGGGATGCTTTATCTTCTGACATGGCTGCTAAGGCATGTCGGGGTCTTCCTGCAGAGCTTGCTGCGAA GCTAGTGGTTAAGGTGATGATAAATTCTGGTACCCTTCCCACATTTTGACGAATGGATATCCAATGAACTTATTTAGTGA GTGCTTTGTTCTTTTTCCCCAGGAAGCTCTAAGATCGAGAGGCCTGAAGGACGATACAACCTGCCTTGTTGTAGATATTA TTCCTTCCGATCTTCCTGTAATATCGCCAACTCCAAGAAAGAAACATAACTTCCTAACTTCACTTCTCTTTGGAAAGAAA TTTGGCAACTCTACAAACAAAGCTACTAGTAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGCTCTGC AATGCTTGCAGAAAGGTACATTCTGGAGCCCTGCTATACTTATATTGCTTTCTATGTCTTGAAGTATCATAGCAAGTTAG CAACTTATCTTAATACCTCCCAGGTTCACGTCTGTGACAAACGACTGGAATTAAGTGGTTTCTTTGTCCATTTGGGTTTA TACTCGTGTGAAACTCAATAAGCTCCCTATTTTGTTAAAATGCAGGCTGGGTAAGGATTTCCCGTTAGATAAAAATTCTG GGATTTTCCGCTGTGCTGTTTGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAACTCCGGGCCTTTTTTCTCT CCAGCATCCAAGCCATGGGAAGGCCCATTTCTCTGCACAAACTGCCGGAAGAAAAAAGATGCCATGGAAGGAAAAAGGCC CAGCAGTCCCACCGTTACAGCATAGTAATTATCAAGTATTATAGTTGTTCTTAGTAAATATCTGTATCATTTTTCCCTGG CAGTGTGA
CDS sequence (LotjaGi1g1v0746300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAGAGTGAATTGTCGTCCACGAGGATGAAGCCGCCACCAGTTCCATTGGCTACTCTGATTGGCCGTGAGCTTCG ACATGAAAAAGTTGAGAAACCTTTTGTCAAGTATGGCCAAGCTGGCTTGGCTAAGAAAGGAGAAGATTACTTTCTCATCA GGACAGATTGTCACAGGGTTCCTGGGGATCCATCAACCGCGTTTTCGGTCTTCGCGATATTTGATGGGCATAATGGTATA TCAGCTGCTATTTTCGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCACAAGATATCAGCAGGGATGCGTG GCTGCAGGCCCTTCCTCGTGCTCTAGTTGTTGGCTTTGTGAAAACTGACACAGAGCTTCAACAAAAGGGGGAAACCTCGG GAACTACAGCTACATTTGTTCTAGTTGATGGATGGACTGTCACAGTTGCATCTGTTGGAGATTCTCGTTGCATATTAGAC ACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTTACTGC CAGTGGTGGTGAAGTTGGAAGACTCAATGTATATGGAGGCAATGGGGTAGGGCCTCTGCGCTGCTGGCCTGGTGGATTGT GCCTATCTAGGTCAATAGGTGACACAGATGTGGGAGAATTTATTGTGCCAATACCACATGTCAAGCAAGTGAAACTTTCA AATGCTGGTGGAAGGCTCATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGACATGGCTGCTAAGGCATGTCG GGGTCTTCCTGCAGAGCTTGCTGCGAAGCTAGTGGTTAAGGAAGCTCTAAGATCGAGAGGCCTGAAGGACGATACAACCT GCCTTGTTGTAGATATTATTCCTTCCGATCTTCCTGTAATATCGCCAACTCCAAGAAAGAAACATAACTTCCTAACTTCA CTTCTCTTTGGAAAGAAATTTGGCAACTCTACAAACAAAGCTACTAGTAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTT ATTTGAAGAGGGCTCTGCAATGCTTGCAGAAAGGCTGGGTAAGGATTTCCCGTTAGATAAAAATTCTGGGATTTTCCGCT GTGCTGTTTGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAACTCCGGGCCTTTTTTCTCTCCAGCATCCAAG CCATGGGAAGGCCCATTTCTCTGCACAAACTGCCGGAAGAAAAAAGATGCCATGGAAGGAAAAAGGCCCATGTGA
Protein sequence (LotjaGi1g1v0746300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKSELSSTRMKPPPVPLATLIGRELRHEKVEKPFVKYGQAGLAKKGEDYFLIRTDCHRVPGDPSTAFSVFAIFDGHNGI SAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDTELQQKGETSGTTATFVLVDGWTVTVASVGDSRCILD TQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVYGGNGVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLS NAGGRLIIASDGIWDALSSDMAAKACRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVISPTPRKKHNFLTS LLFGKKFGNSTNKATSKLSAVGVVEELFEEGSAMLAERLGKDFPLDKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASK PWEGPFLCTNCRKKKDAMEGKRPM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 376 | 376 | 6.1E-168 | – | |
| PANTHER | 1 | 376 | 376 | 6.1E-168 | ||
| SMART | 25 | 297 | 273 | 9.9E-62 | ||
| Gene3D | 31 | 302 | 272 | 3.4E-57 | ||
| ProSiteProfiles | 34 | 299 | 266 | 37.069 | ||
| SUPERFAMILY | 39 | 299 | 261 | 5.89E-52 | ||
| CDD | 45 | 299 | 255 | 1.07224E-62 | ||
| SMART | 52 | 299 | 248 | 3.6E-4 | ||
| Pfam | 64 | 282 | 219 | 8.7E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0746300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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