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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0748500 |
| Transcript ID | LotjaGi1g1v0748500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | plant/protein (Protein of unknown function, DUF538); TAIR: AT1G09310.1 plant/protein (Protein of unknown function, DUF538); Swiss-Prot: sp|Q9M015|Y5161_ARATH Uncharacterized protein At5g01610; TrEMBL-Plants: tr|I3T5T3|I3T5T3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0748500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132104689..132110509) extracted from Lotus japonicus Gifu genome v1.2.
AGCTTATGCTGTCAGATAAGCTCAAATAAGCTCTTCCAAACTGGGCCTAAGGTTGTGATTGTGATCACATATTTGCATAT GTATAAAATATTATGGTGTTTTTTGAATAATTTAATTTTCCAAGTAAAGGTAATAACAATTTGGGAAAATCAATTGATGT CATCTCCTTTACTATTTATGGAACCCTCTTCCAAAAAATGTATACCGCAATTTAAAAGTGCAGTATGCATTTTTTTTATA GTACAATTTAAAGTGCAGTATGCATAGGGATGTGACATGAATAGGTGTGTGGATGACATGAATAGATTTTCCTATAACTT ACTTTAACTGAACTCACTTGTGTTTGTTTCTAGGGAATATGAGGGGGAGGAAGTGGAGAGGAAGGATTTTGAGCTGAAAA TGAATCTTTGATCTGTTTGGATCAGAGTGGAAAATAGAGGAATGAACTAAAAACATATGGGGTCCACTGTGTCAGGAATC CTTTCCCAATGGGCCTGAGTCTGACAAATGGAGAGTCTCTTCTCTTTCCAATTCTACCCTTATATTTAAAAATTTATTTT AACTGGAAAAAACTATTTAAATTTGTAAAAAAGTATAATTATAATTACTATAAAAAAGGATGTATAAATAGGCCTTTAAA AACTTTTGGGTAGTGCTTTGAAGTTTGAAGAGACATTTGGTTTTTGAGGCTGTTGAATTTGCGGCCCTTGGTTTTTTAGG TTGGTTTTTGCTCATTTTATATGTGAGTTTTTTTATACCTCGTTGAGGAGATCCTATATTTTCTCATTTACTTCATTATT ATTATATATTACTTTAGAAAAAAAACTATAATAACTTTATTTTAAAAATTACTTTGAAGCTCAACGTATACTAAAAAGTG AAATATTAGTTGTTTTATATACCACACTCAAGTTTCAAAAAAAAAAAAATTATATACCACACTCACTTTCATTACTCTTT CTTTTATTCTCATTATTTTTCCTTTTCTCTAAATTCAGACAACTTTAAAATTACATTATTTTCTCCTTATAGTTTTTCTT TTTATTTTATTTTCTCTAATATTCCTTAATTTTATTTTCCCTCTAGATCCAAACAAATTATTAAGACGAGTCAAATCCAT CCAAAGTTCAAAACCCTTATTATTGTAAGACAAAAGAAAAGTAGGCAACGGAAGGTATTGTAGGTTGATGTCGGTGGAGT AGTGACGCTCAGACCGTAAGGATCATTGATGCCATCAACTCGCAGCACCTAATAACAAAAAGGTGAACTGTTGATAACCT TCCCAACTACATTTTTTCTCCTTGCTAGCTCGCTATCTGTCTCCAAACCAACGCTTTACCATTTATTATGCCATCAATTT TCAACCCTATCGATCATAAAGGGACAAAGGATTCAAGATCCTTTAACTATAACCAAACAGAAAGTCAACGCTTTACCATT TCTCAGACTTTTATAGTGTGAATATTAAGCAATCAATCTTATTTTAAATGTTCAACACATTATCCCTTTTTTTTTAGTAC AATCCACCCACTAGAAATCGATCATTGGACCTCCTCCTACTTAACTTATATGTCTTCAGTTTCTACCACTTGAGCTATCC TAAGGTTAAATTTCATTATAAAATAATGTAACTTAATTGGATAAAAATGTGTCTCTCCAACGTTTTAAAAATGCGATTGA TTCACAATAGAGTGCTGCTAGAGAGCACGACACTCTAGACTCTACTACTCTAGCGCATGACAACATAGTGAAAAATTGAA CATACGACTCTCTTTGCATGAATAATGAATTTCAGTTTCAGAAATTAAAAATTTATAATAAAATATTAAGTTGGAATTCA ATAACACTAGTCGTGATTGTTGTGTGATAAATCTGTTGTGTCCCCCTAGCATTTTCCTTCACAATATAAAAGTCTTTTTA GAAACGCATATAATAATCTCAAATGACATAAACGAAATGAAGTTTATGTTTTCCATTAAATCGATGTAATGAGTTACATA GGCATTATTTAATTAATAGAAGTTTTCCATAAAAAAACTGAACCATTTAATGTATTAATAAAATTCAATTCTTTAGTTAC CTAATTTTATTTGGTGAATTATGTGGTACACACTTTTTTTTAGGGTGTGATACCCACATTAGGTGATTCAGTAGATTAAT GACATGTGGTAATTGAAATTATAACTCTCAATATTATAATTCTAGTTCAATAGTGTTCTCGATCATTGAACAACTCAATT GTCTCTCGACGACCTTTGTTGACGTCCACCACGACCTTGCAGAGGTTGCAGTCAATCTCAATCCTAGCATTTGGTATGAG CGACATGGTTTTGATCAAGGGAGATGTCTAACCCCTATTTAATCAACGTCATTAATCTTAAGATACATTATTGAAAAAAT ACAATTACTGACTCATATGATACATGAGTCTTTATTACTATATCAACTCATTTAGAGTATCATACATTGACTTGAATTAA AGTACCACAACAAGCACCTTATTTTTATCCACACGCATACATATTTTAACTACTTTTGTTCGTTCTTGATTATTTGAGGG GCATGGCCCGGTCAAGGATACATTTCTACGTAGTTTTGCTTAATTGTCCTTTCATGAATCATGAATGAGCAGAGCCCCTG CAGGTTACTTACTTACCAAGATCATTGATGATATAAGTATTTAATTTTTCCAATTAAGATTTTATCACTGAAAATTATGA AATAAATATTTTTTCTCTAATTGTACATGTATTTATTATTATTATTATTTAGATAACATGACAGGGTTATGCTGGGAGAA AAACAATTAAACACCCGACTCAAACAGACAAGACGATAAATTCTTTGCTACATCAATGCTAAGAAACCGGTGACAACCGT GAGGCGAAGAGGAAAAAACATGAACTCCAAAAAGAAGCATGAGTGCTAGCTGCACTAACGAACCAACCTACAACTAAATT AACTATCTAGTAACGTAGGAGAGCTTGATGCTGCCATGGAGAGATATTATGCCTAATACAACTAATAATCTTCACATATG GATGATCATGATCATATGCTGAAGAGGCCAACATAATTATTGCCTTTTTTGAGTCGCTCTCAATTTGAACAAGCAGGAAA TTATGATCCAAGACAAGTTGGATCACTTTGTACTCAACTCAGCAAAGAGGGTACCAGATAGCTCATAGCCACATGTATCC AATCCCAGATGTTGAGCTAGGACAAAATTCAGAGAATGACAAACTCTGGAAGATCATATGGAATATTCAGGCCCCTGAGA AAGTTAAAGTGTTCATATGGAAATGCTGCTCCAACGCGCTACCAGTAAAAGCTGCTCTACATAGAGGGAGAATTAGTAAC GATGAGCTCTGTCCCCTGTGCAACCAGAGCCCTGAAACTATAACTCATGCCATTTTCCATTGCCCCTGGACTAGGCCCGT TTGGTTCGCGTCCTAATTACAAATTAACCATGATTCAAACAACTTCCAGTGTATTGGAGACTGGATATTACTGATGGAAG ATTCTCTGAAAAACCAGGCTGATTTCCATGCTATGGGGCTTAGGATCATAGCCCTTACCACTTGGGCAATTTGGAAGGAG AGAAGTGAATGCATTTTCCAAGGGAGGCCTCCAAATCCCTGTGCTACAGTAGCCAAGTTGAGCAGTTCAATTCTAGAAGA TTATGAGGGAAGCATTCAAGTCCAGGATCAGGCTTCTAATGCAATTAGGGGGCAACATTCAATCAGAAGGTCTCACTGGA TTGCACCTCCGCAAGGAAGAGTGAAGATTAATGTGGATGCGGCTTTTAATAAGACTACTTGCAGAGGAGCAGTAGCAGCA ATATGCAGAGACGAGACTGGAGCCCAATTGATGAGCCATTCCCGGGGCATTCATGCCCCTTCCCCTTTAGTGGCGGAGGC GATAGCAATTAGAGAGGCCCTCACCCTCATCCTCAACCTGGGATTAGACCAAGCACAAGTGGAATCTGACAACAAAGAAA TTATTTCCCTTTAGTGACCAAGTACTGTGCATATATTTTTAATTTAATGCTTACCACTTTTATGTTTATTCTTTTAATCA TGGCCTTTATAACACTAGATAACATCTTTTTCAAAAATTGATTTTATTTTTTATGAGTATTTTCTTAACCAAATATTCTG ACAATTCCCTTTATAGTAAAAAACAAACAAACATTCAAATTTCAAAGTGATGTTACTAGTAATTCTCAATTTGATTTAAT TAATTTCAATATTTGTTTCTGCAAGTGGCTACGATTTCCAAGAAATCGGTTACCAATAGAGAAAGAAAGCCCGGTGGCAT TTTCGAAATTTATCCGAAAAATAAGGTCAGTTTCAAACTCTGATCACTATTTATAAAGTTCACCCCCAATCAGTGTTAAC TCACAGACACCACAGCAAATCAAAACAGAGCTTAGAATCGAAGCAGAGAGAGAGTGAGATCGATCGATCATCATCATCAT CATCATCATCATCATCATCGATGTCGCTGGTAACAGAAGAAATCAGAGGCAGATCAGAGATTTACCATGGCGACGAACTC TGCCAAGTCAAATCCAAGGATCTGTTGAAGGAAATCGCTCTTCCCAATGGCTTACTTCCACTGAAAGACATGGAGGAGTG TGGAATCAACAGGGAATCTGGATTGGTGTGGCTGAAGCAGAAGAAGAGCACCACGCACAAGTTCGACAAGATCGGGAAGC TTGTTTCGTACGGGCCGGAGGTGACTGCTCAGGTTGAGAAAGGGAAGATCAAGAAGCTCACTGGTGTGAAGACGAAGGAG CTTCTGCTTTGGGTGTCGCTGAGTGATATCTACACGGATGAACCGCCGACAGGGAAGATCACGTTCAAGACGCCGGCTGG GCTTTACAGGTCGTTTCCTGTGTCTGCTTTTGAGATTGTGGAAGAGAAATCTTGTGTGGAGGAGAAGAGTAAGAATCATG AGGTTGTTGGAGATGGTGTTGGTGGAGGAGTCAAAGAGGTTTGATTAACAATTTAATAGAATTACCACATGCAATTGTGG CTGGATTAAATGTTGACTAATAAGTTATAAGAATTATAATGAAGGATGATGATGATGTTATTTTTAGTTTATTTATCATG TTCATTTCATGTGGTTTTACTTTTATATGCTATTATGATTTTAGAGATGGATTGTGCCTTACACTTAACAGAAAATTGAT CATGAATACAAGGAAGCTATTCAATACTCTAAAATGAAAGTCACCAATGGCCACTTGGAGTTATCTCTCTTTCATTTCAG ACTTTGGCAAAACCTAAATTTTGTTTTCTTTTTTCATGAGTAAAATAATGAAATTTTTTGAATGAGAATTGAAATGGTGT CAATTTTTAATTGAAAGTAAAAATAAATCCAGAATGTCAACATCAAGTAGTATTATTATTTTGGCATATAATAACTCACT CTAGTGAGATCTCATTTGTCGAAACATGTAGTAGGAGTGCGTGCCGTGTTCCACCATGAAATGAAATTATAACCAGGTTG AGGTAGGAGTCACATAAAGAACGTGCACATCAACAATATTGCAGAATTTGGAAAAAAATGTGGATAAAGGAGTGACCGCC ATACTTGAATGAACTGAACACGTCAATACCAAAAGCATGTTACGAAATGCAAGCCTCACAAGATAGCTTTAATTAATTGT TGCCACTTTACAAGGGCAATCTCTTTTTACTTCCCTGAAATACATATAATCTAATGGTTTAAATCAAAGCATCGTCCAGC CAAAGATAGGTCAAGTTTGATTGGAATGGACAAGCAAATTACTTTTGTTTTTTACTATGGC
CDS sequence (LotjaGi1g1v0748500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCTGGTAACAGAAGAAATCAGAGGCAGATCAGAGATTTACCATGGCGACGAACTCTGCCAAGTCAAATCCAAGGA TCTGTTGAAGGAAATCGCTCTTCCCAATGGCTTACTTCCACTGAAAGACATGGAGGAGTGTGGAATCAACAGGGAATCTG GATTGGTGTGGCTGAAGCAGAAGAAGAGCACCACGCACAAGTTCGACAAGATCGGGAAGCTTGTTTCGTACGGGCCGGAG GTGACTGCTCAGGTTGAGAAAGGGAAGATCAAGAAGCTCACTGGTGTGAAGACGAAGGAGCTTCTGCTTTGGGTGTCGCT GAGTGATATCTACACGGATGAACCGCCGACAGGGAAGATCACGTTCAAGACGCCGGCTGGGCTTTACAGGTCGTTTCCTG TGTCTGCTTTTGAGATTGTGGAAGAGAAATCTTGTGTGGAGGAGAAGAGTAAGAATCATGAGGTTGTTGGAGATGGTGTT GGTGGAGGAGTCAAAGAGGTTTGA
Protein sequence (LotjaGi1g1v0748500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLVTEEIRGRSEIYHGDELCQVKSKDLLKEIALPNGLLPLKDMEECGINRESGLVWLKQKKSTTHKFDKIGKLVSYGPE VTAQVEKGKIKKLTGVKTKELLLWVSLSDIYTDEPPTGKITFKTPAGLYRSFPVSAFEIVEEKSCVEEKSKNHEVVGDGV GGGVKEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 149 | 148 | 1.2E-70 | – | |
| PANTHER | 2 | 149 | 148 | 1.2E-70 | ||
| SUPERFAMILY | 4 | 143 | 140 | 7.06E-39 | ||
| Gene3D | 15 | 149 | 135 | 5.9E-24 | ||
| Pfam | 26 | 138 | 113 | 1.4E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0748500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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