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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0750500 |
| Transcript ID | LotjaGi1g1v0750500.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT3G17390.1 S-adenosylmethionine synthetase family protein; Swiss-Prot: sp|Q96552|METK2_CATRO S-adenosylmethionine synthase 2; TrEMBL-Plants: tr|V7D197|V7D197_PHAVU S-adenosylmethionine synthase; Found in the gene: LotjaGi1g1v0750500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132278847..132280757) extracted from Lotus japonicus Gifu genome v1.2.
TTGTCATATTTTTTAAAACCATCACACTATGTCTTGAATGAGATTGTTGTGTATATTTTGTTAATCCATTTTTTAGCTTG CTGTAGATTGGGAGTATGGATACCTTCTTGTTCACTTCTGAGTCAGTGAATGAGGGTCACCCTGACAAGCTCTGTGACCA GATTTCTGATGCAGTACTTGATGCCTGCCTGGAGCAAGATCCAGAAAGCAAGGTTGCCTGTGACACCTGCACCAAGACCA ACCTGGTCATGGTGTTTGGAGAGATCACCACGAAAGCTAATGTAGACTATGAGAAGATTGTTCGCGACACGTGCCGTTCT ATAGGATTTGTGTCCAATGATGTTGGCCTTGATGCAGATAACTGTAAGGTACTGGTCTACCTGGAGCAGCAAAGCCCTGA TATTGCTCAGGGAGTTCATGGTCATCTTACAAAACCACCTGAGGAGATAGGTGCTGGTGATCAAGGTCACATGTTTGGCT ATGCAACAGATGAAACGCCTGAGCTCATGCCTCTCAGTCATGTCCTTGCAACAAAGTTAGGTGCTCGTCTTACAGAGGTA CTTATAGGTACTCTGCACTCGTAGTTAGAACATGTTTGAATCAACTTCTTTTTCCTCATAATCAATTCTAGCACCCAGAT GCTACTTATGAAAGCTTTTCCTAAGAATTAATTTTAACTTCAGAATTAATTATTGAAGGATTGTCAAACATGCACTTAGA GCATTATGAATAAGAGAGTTAGATGAATTTGAATCCTCTACATTAAAAGTTCTCTACAGCGCTCTCCTGCACAATTACAG GTCATTGATTTTTGTAATCAATGGCTAAGGTGGATCTAAATATTAAAAAAATTAAATTAAAGAATTTATGGTGACTTGTT ATCCGCACGGAGAATTTGAATTCAACAATTATAGTTCATAGTTATTCTTGAATGACTACAATTTTCTTCTTGTTAATTCA TTGCTTGTTCCTATCAGGTCCGCAAGAAAGGGACATGCCCCTGGTTAAGACCCGATGGAAAAACTCAAGTCACTGTGGAA TATTACAATGACAATGGTGCCATGGTCCCTGTGCGAGTCCACACTGTTCTCATTTCCACTCAGCATGATGAAACTGTCAC CAATGAAGAGATTGCTGCTGATCTCAAAGAGCATGTTATCAAGCCTGTTATACCTAACAAATACTTGGATGAGAAGACCA TTTTCCATCTCAACCCATCTGGCCGTTTTGTCATTGGTGGTCCTCATGGTGATGCAGGCCTCACCGGGCGCAAAATCATC GTTGACACCTATGGTGGTTGGGGAGCTCATGGTGGGGGTGCTTTCTCTGGGAAGGATCCCACCAAGGTGGATAGGAGCGG AGCCTACGTTGCTAGACAGGCTGCAAAGAGCATTGTGGCCAGTGGAGTTGCTAGAAGGTGCACTGTGCAGATTTCATATG CAATTAGTGAGCCTGACCCGTTATCTGTGTTTGTTGACACTTACGGAACTGGAAAGATTCCAGAGAAGGAGATTCTGAAG ATTGTGAAGGAAAATTAAGACTTCAGGCCTGGAATGATTTCCATTGATCTAGACCTTAAGAGGGGTGGAAATGGAAGGTA CTTGAAAACTGCTGCTTACGGCCACTTTGGTAGAGATGACCCTGATTTCACCTGGGAGGTGGTGAAGCCTCTCGAGTGGG AAAGTGATAATGTTCTGGTTTTCTTAGCTGCTTTCTTGCCTGTAGTTGTTGCTGTTTGTGGTTGCCTTTTCTTTTTTGTT CCTGTTTTACGTGGTGTAATTTTACACTACCTACTTTAACCGGGTATAGTAGGTCAACACATTATTTTTTTAAAGAAAAA ATATCATTAAAAATTTGTCATATATTAATTTTTTTAAAAAAAAGATGTGTTGACCTGTTATAGCAGGTTAA
CDS sequence (LotjaGi1g1v0750500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACCTTCTTGTTCACTTCTGAGTCAGTGAATGAGGGTCACCCTGACAAGCTCTGTGACCAGATTTCTGATGCAGT ACTTGATGCCTGCCTGGAGCAAGATCCAGAAAGCAAGGTTGCCTGTGACACCTGCACCAAGACCAACCTGGTCATGGTGT TTGGAGAGATCACCACGAAAGCTAATGTAGACTATGAGAAGATTGTTCGCGACACGTGCCGTTCTATAGGATTTGTGTCC AATGATGTTGGCCTTGATGCAGATAACTGTAAGGTACTGGTCTACCTGGAGCAGCAAAGCCCTGATATTGCTCAGGGAGT TCATGGTCATCTTACAAAACCACCTGAGGAGATAGGTGCTGGTGATCAAGGTCACATGTTTGGCTATGCAACAGATGAAA CGCCTGAGCTCATGCCTCTCAGTCATGTCCTTGCAACAAAGTTAGGTGCTCGTCTTACAGAGGTCCGCAAGAAAGGGACA TGCCCCTGGTTAAGACCCGATGGAAAAACTCAAGTCACTGTGGAATATTACAATGACAATGGTGCCATGGTCCCTGTGCG AGTCCACACTGTTCTCATTTCCACTCAGCATGATGAAACTGTCACCAATGAAGAGATTGCTGCTGATCTCAAAGAGCATG TTATCAAGCCTGTTATACCTAACAAATACTTGGATGAGAAGACCATTTTCCATCTCAACCCATCTGGCCGTTTTGTCATT GGTGGTCCTCATGGTGATGCAGGCCTCACCGGGCGCAAAATCATCGTTGACACCTATGGTGGTTGGGGAGCTCATGGTGG GGGTGCTTTCTCTGGGAAGGATCCCACCAAGGTGGATAGGAGCGGAGCCTACGTTGCTAGACAGGCTGCAAAGAGCATTG TGGCCAGTGGAGTTGCTAGAAGGTGCACTGTGCAGATTTCATATGCAATTAGTGAGCCTGACCCGTTATCTGTGTTTGTT GACACTTACGGAACTGGAAAGATTCCAGAGAAGGAGATTCTGAAGATTGTGAAGGAAAATTAA
Protein sequence (LotjaGi1g1v0750500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACDTCTKTNLVMVFGEITTKANVDYEKIVRDTCRSIGFVS NDVGLDADNCKVLVYLEQQSPDIAQGVHGHLTKPPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKKGT CPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNEEIAADLKEHVIKPVIPNKYLDEKTIFHLNPSGRFVI GGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGVARRCTVQISYAISEPDPLSVFV DTYGTGKIPEKEILKIVKEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 340 | 340 | 1.3E-229 | – | |
| PANTHER | 1 | 340 | 340 | 1.3E-229 | ||
| SUPERFAMILY | 3 | 109 | 107 | 9.03E-47 | ||
| Pfam | 4 | 101 | 98 | 3.6E-42 | ||
| Gene3D | 5 | 242 | 238 | 7.4E-156 | – | |
| CDD | 5 | 340 | 336 | 0.0 | – | |
| TIGRFAM | 5 | 339 | 335 | 7.3E-152 | ||
| Gene3D | 11 | 279 | 269 | 7.4E-156 | – | |
| SUPERFAMILY | 115 | 239 | 125 | 1.8E-53 | ||
| Pfam | 117 | 238 | 122 | 1.1E-47 | ||
| Gene3D | 117 | 340 | 224 | 7.4E-156 | – | |
| ProSitePatterns | 119 | 129 | 11 | - | ||
| Pfam | 240 | 340 | 101 | 8.3E-49 | ||
| SUPERFAMILY | 240 | 339 | 100 | 5.89E-46 | ||
| ProSitePatterns | 266 | 274 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi1g1v0750500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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