Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0755300 |
| Transcript ID | LotjaGi1g1v0755300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide-sugar transporter family protein; TAIR: AT3G17430.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430; TrEMBL-Plants: tr|I1NBH1|I1NBH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0755300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132850891..132854618) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCACTTGGTGCCATAATAATGAGTAAGCAGCATCTGCTCACCTACATGTACCTTCTAGTTTACATTTCACTTTCATC AGGGGTTATTCTCTATAACAAGGCAAGGGATCACAGATATACCAACTAATTCTTTCGTTTACGTTTGTGATTTATCTTGT AATTATATTTTGCTCACCCTCTTTCCTTATATGGGCATTGCAGTGGGTCCTCTCCACATTGTATTTCAACTTTCCATTTC CAATAACACTCACTATGATCCATATGGCTTTTTCTGGCGCTGTGGCCTTTGTGCTTATCCGGGTTCTCAAGGTATGACCG TATGAGACTGTTGGAGTTTGTAATGTCACCAGTTTTAGACTTTATGTTGTTGACTCCTTAATGCTATTCCCTTATTATTC ATTAGCTTTTTCTTGAAAAGTATTGCTGAATCAACTGGATGATATTTCTTTTTCATCTTCTTTCAATTGATGCAGGTTGT ATCACCTATTAAGATGACATTACATATGTAAGAATTCTACATGGATATCCTGTTTCACATTTCGCTTATTATATCTCGCT TCTCACAAAAAGTATGATTTGCAGATATGCAACTTGTGTGGTCCCTATAAGCGCCTTCTTTGCCGCAAGTCTGTGGTAAG CAATTGACATTATTGATCCAAAGTTGTAATTTGAGCAAACCCATTTCTAAATTCTAATATGTGTTCCTTAAACAGCCCCC CATATTCATTTATATGTTTGTAAAGTCAGTGCTAAAGTTCCCTGGCATCTTAGTGAAGTTGATACTCTACTGTTTCTGTT CCCTTTTGTAAACAAAATAAAACAGTGTCTGAGCGAGTTATGATCATCAAGTTTATGCTTCCTTAATCAAATCATGTTTT GAGCATTTTGTTTCATTGTGTGTGTGTGCATACTCGGGTTTGTGGTGCCAAGCAAAAAAACGTTGCAGCACAAGATTCAT GAATGTAAATTTTATTTGTAGATATGCTAGACTTCAAATAACATTGTATTGGAATTTTATATTGTATTTGCTATTCATTC TGTCTATTACCTTCTCTGTTTAGTTGGAAGTTTGCTGATAAAACAAATGGTTTCATTACAAACTTCTTGGATCAAACAAA CATCATCTGGCACAAATATGTTCATCAATTTCTGTTTGCAGATATAAGAAATAAGAAGATTTAGATAACATACCCTGAGA CGTGTATGCTACAGTATATTTGTTATTCATCTTCTTGATTGCCTATGCATTTTGTTGGAAATTAGCTGATACAACTCGTG ATTTCATAATAGTTATCCTGAAATCAACAAATTATGTTTGAAAGAATCGGGATTTGAAAGGATTGGAATACTTTTATATT GCACCATAGAATATCATAAAAAAAGAAAATTGAGCTAAAGTTGTATTAGTAATAATTACTGTATTACATCACATAGCCTT TGAAGTTTTATTAATTACTTTAAAACTACCTTCCCAAATTCATAGTTGCATTGAAAATGTTGATTTAATTACTTTGTTGT CCTTTTAGGTTTGGGAACACTGCCTATTTATTCATTTCTGTCGCCTTCATCCAGATGCTTAAAGCCCTGAGTGAGTTAAT TTTCGCTTATCATCCTTCCAGCTGCCATATTTTTGGAAAATAACAATCCCTAATAGAAATCATCCCTTTTGTTATTTATT TTTTATTTGCAGTGCCTGTGGCAACATTTCTGGTGGCTGTGACTCTTGGAACTGAGAAATTAAGGTGTGACGTGTTCTGG AACATGGTGCTGGTCAGTGTTGGAGTTGTAATTTCCTCCTACGGGGAAATTCATTTTAATGTAATCGGTACAGTTTATCA GGTCACAGGAATAATTGCTGAAGCGTTGAGGCTGGTCTTAACTCAAGTTCTTCTTCAAAAGAAGGGCTTGACACTAAATC CTATTACCAGCTTGTATTACATAGCACCTTGCAGGTAGTTCTATTCTTATGCATTTCAAAGCCCTTTTATAGTTCTGCAT ATACCATTGGTAGCCTTTTATATGCTTATAATGCACTTATTTTGACTCAAGAAAGGGAATGGGGCAGGGAGAGGCACAAA TATTGAAATATCTGTGTATTGAAAATGTCAATGGGTACAATGAAATTCAAATTTATTATTTATATCTTTATTTATCTGGA AGAATAATGATCATTCGCTCATTATTGTATGCAGCTTTGTATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAG ATGGAAGATCCGCATATGCAATTTAACTTCTGGATATTTTTCTCAAATGCGCTTTGTGCTTTGGCGTTGAATCTTTCAAC TTTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGTTACTTATCACTCTTT CTACTGTCTTATTTCCTGAGTCAAAGATTACAGGGCTTAATATTACTGGCTATGCTATTGGTATATGCTTCTTTAATGAA AAGACATTATACTATTATAGTAGTTTAAATTTGTTGTATTGCATGGATTTCCTTTATGTGTCTCTTTATATAAATTATTT TTGAATGAGCAGCTTTAAGTGGCGTTGTTTTATACAACTACCTGAAGGTCAAAGATGCTCGCACATCTCAACTTCAAAGT ACCCAAGATGAATCAACAAAGGTCAGCCTTTTCAGTAATTTTTTTTGTTTTTGTTTTGTAGTTTGATCAGCATTCATGCA TGATTTAAGTGTCTTTGGCTCTATTCTCTTATGTGGTGTTTTATACTAGAAAGGCGATGCCATTTTGTGATTTATTCCAT AAACATTCCCATGTTTGTAGAAAAAAGAATGGAATGTTTTCTAACACAGCCTCATTTATTTCATACAATGATAATTATCA TCCATTTTTTTATTGAATTTATGATTTCTAAATTTCAATTCTATTTTCAACCTGATCCTGTAATTCCTTTTAAATACTCA TGTAATTCTAGGTATCAAACAATTGAATGGTTTGGAAAGTCATTTCCATTCAACAAGCTACCAAACTGTGAATTGAGAAT GGCCATTCGATTTCATTCCATTTGGATTACATTACAATTTAGTACTATTTATCACCATTCTGTGTGAATTTGACATTAGT TACTTACTACTTAACTTTAGGTCTTTAGCCATCTTTTCTTCCATGAATTTTAATCAAATGATCCAAACATTCATTGCAGT AACTGTGAGTACTGTTTTATTTTATAACCTAGCCACCATATGAATAAAGAAATTGAGTAAAGTTCTACTTCATCATGCCT TCACACATCCTTTGTTTTTGGGAGTGAAAAGACATGTCCAAATTTCAAACTCTAATCATATGGTTCTTTTTGGCTTGATA ATTTCTTACAGATATAGCAGACTAATTAATTGTTTATCTAATCTGACCTTTCTCCTCTCCTTTCTGCGGGCGTAATTAAG TTTTGCTTACTGACATAGTGATTGATGATTGATTCAACTCATTCAAGTCTGATTGCAGTTGGTGCTAGTGAACCTTCATT TTTTTTAAGGAAGCATATTTATTGGTTTGACTTTTGCGCTTTGCTTTTTGAATAAATATAGGAGTTACAGATGGAGAAAA AGGCAGAGGATGATGTGATCAGCAATGAGGAGACATTACAAAATGATTTAGTTTCCGATACTCATTTTGATGAAGAAGCG CCTTTAATCTCTTCGCGGATATCACATCTGGGAAGAAAACCAGCTTAG
CDS sequence (LotjaGi1g1v0755300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTTGGTGCCATAATAATGAGTAAGCAGCATCTGCTCACCTACATGTACCTTCTAGTTTACATTTCACTTTCATC AGGGGTTATTCTCTATAACAAGTGGGTCCTCTCCACATTGTATTTCAACTTTCCATTTCCAATAACACTCACTATGATCC ATATGGCTTTTTCTGGCGCTGTGGCCTTTGTGCTTATCCGGGTTCTCAAGGTTGTATCACCTATTAAGATGACATTACAT ATATATGCAACTTGTGTGGTCCCTATAAGCGCCTTCTTTGCCGCAAGTCTGTGGTTTGGGAACACTGCCTATTTATTCAT TTCTGTCGCCTTCATCCAGATGCTTAAAGCCCTGATGCCTGTGGCAACATTTCTGGTGGCTGTGACTCTTGGAACTGAGA AATTAAGGTGTGACGTGTTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTAATTTCCTCCTACGGGGAAATTCATTTT AATGTAATCGGTACAGTTTATCAGGTCACAGGAATAATTGCTGAAGCGTTGAGGCTGGTCTTAACTCAAGTTCTTCTTCA AAAGAAGGGCTTGACACTAAATCCTATTACCAGCTTGTATTACATAGCACCTTGCAGCTTTGTATTTCTTTTTATCCCAT GGTATATCCTTGAGAAGCCTGAGATGGAAGATCCGCATATGCAATTTAACTTCTGGATATTTTTCTCAAATGCGCTTTGT GCTTTGGCGTTGAATCTTTCAACTTTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGAGTGGCTGGAGTTTTGAA AGACTGGTTACTTATCACTCTTTCTACTGTCTTATTTCCTGAGTCAAAGATTACAGGGCTTAATATTACTGGCTATGCTA TTGCTTTAAGTGGCGTTGTTTTATACAACTACCTGAAGGTCAAAGATGCTCGCACATCTCAACTTCAAAGTACCCAAGAT GAATCAACAAAGGAGTTACAGATGGAGAAAAAGGCAGAGGATGATGTGATCAGCAATGAGGAGACATTACAAAATGATTT AGTTTCCGATACTCATTTTGATGAAGAAGCGCCTTTAATCTCTTCGCGGATATCACATCTGGGAAGAAAACCAGCTTAG
Protein sequence (LotjaGi1g1v0755300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALGAIIMSKQHLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPIKMTLH IYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHF NVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNALC ALALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKVKDARTSQLQSTQD ESTKELQMEKKAEDDVISNEETLQNDLVSDTHFDEEAPLISSRISHLGRKPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 364 | 364 | 3.5E-226 | – | |
| PANTHER | 1 | 364 | 364 | 3.5E-226 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Pfam | 17 | 303 | 287 | 2.9E-23 | ||
| Phobius | 33 | 43 | 11 | - | – | |
| Phobius | 44 | 69 | 26 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 81 | 99 | 19 | - | – | |
| Phobius | 100 | 104 | 5 | - | – | |
| Phobius | 105 | 127 | 23 | - | – | |
| TMHMM | 110 | 132 | 23 | - | – | |
| Phobius | 128 | 138 | 11 | - | – | |
| Phobius | 139 | 160 | 22 | - | – | |
| TMHMM | 139 | 158 | 20 | - | – | |
| Phobius | 161 | 165 | 5 | - | – | |
| TMHMM | 162 | 181 | 20 | - | – | |
| Phobius | 166 | 186 | 21 | - | – | |
| Phobius | 187 | 197 | 11 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| Phobius | 198 | 217 | 20 | - | – | |
| Phobius | 218 | 228 | 11 | - | – | |
| Phobius | 229 | 251 | 23 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 252 | 257 | 6 | - | – | |
| Phobius | 258 | 279 | 22 | - | – | |
| TMHMM | 260 | 279 | 20 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| TMHMM | 284 | 305 | 22 | - | – | |
| Phobius | 285 | 305 | 21 | - | – | |
| Phobius | 306 | 372 | 67 | - | – | |
| MobiDBLite | 316 | 350 | 35 | - | – | |
| MobiDBLite | 323 | 338 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0755300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…