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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0755600 |
| Transcript ID | LotjaGi1g1v0755600.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT4G01850.1 S-adenosylmethionine synthetase 2; Swiss-Prot: sp|A4PU48|METK_MEDTR S-adenosylmethionine synthase; TrEMBL-Plants: tr|G7KUJ1|G7KUJ1_MEDTR S-adenosylmethionine synthase; Found in the gene: LotjaGi1g1v0755600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132888074..132889549) extracted from Lotus japonicus Gifu genome v1.2.
GGAATCTTTGATCTTGATATGCTTTGTTACTTTCTTTGCTAGTTTCAATTATTCTGTCTGGACCAAAAGCCTTTAAATTA TTCTAATCAATCTTGCGGGGGAAGTTTCCAGATTTGCTTTTCAATTTGTTTAGAAGGATGCTGAGCTTTAAGAGCTATTC CTTTTGTGATTTGATCTCAAATCTCAAATATCTTCTACTTATAAGCACTGAGAAAACTTGTTTTTCTATTATTAAGCTTT CGTGCTTTATATACTGAACTCTTTCTTTTTTTGCTGCTTTGTGTAGCTTGAGAAATGGCAGAGACCTTTCTATTCACCTC TGAATCTGTAAACGAGGGTCACCCTGACAAGCTGTGCGACCAGATCTCCGATGCGGTGCTCGATGCCTGTCTAGAGCAGG ATCCTGACAGCAAGGTTGCCTGTGAGACTTGCACCAAGACTAACATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCC AACGTGGACTATGAGAAGATCGTCCGTGACACGTGCCGTACAATCGGATTCGTGTCTGATGATGTGGGTCTTGATGCTGA CAAATGCAAGGTCTTGGTGAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTGCATGGCCACTTCACCAAGCGCC CTGAGGACATTGGTGCTGGCGACCAAGGTCACATGTTTGGTTATGCAACTGATGAGACCCCTGAGCTCATGCCACTGAGC CATGTCCTTGCAACCAAACTAGGAGCTAAACTCACTGAGGTTAGGAAGAATGGTACCTGTGCTTGGCTGAGGCCCGATGG CAAGACACAAGTCACCGTTGAGTACTACAATGAGAACGGTGCTATGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCAA CCCAGCATGATGAGACTGTCAGCAATGACCAAATTGCTGCTGATCTTAAGGAGCATGTCATCAAGCCTGTCATCCCTGAG AAGTACTTGGATGAGAAGACTATCTTCCACCTTAACCCTTCAGGCCGCTTTGTCATTGGTGGCCCTCACGGTGATGCTGG CCTAACCGGAAGGAAGATCATCATTGATACTTATGGTGGCTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGCAAGGACC CTACTAAGGTTGACAGGAGTGGTGCCTACATTGTGAGGCAGGCAGCAAAGAGTATTGTGGCAAACGGCTTAGCCCGGAGG TGCCTTGTTCAGGTTTCTTATGCTATTGGTGTTCCTGAACCCTTGTCTGTCTTCGTTGACTCTTATGGAACTGGAAGTAT CCCTGACAAGGAGATTCTTCAGATTGTGAAGGAGAATTTTGACTTCAGACCTGGAATGATGACCATCAACTTGGACCTTA AGAGGGGTGGAAACAGGTTCATCAAGACAGCTGCATATGGACACTTTGGAAGGGATGACCCAGACTTCACCTGGGAAGTT GTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA
CDS sequence (LotjaGi1g1v0755600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCCAACGTGGACTATGAGAAGATCGTCCGTGACACGTGCCGTACAAT CGGATTCGTGTCTGATGATGTGGGTCTTGATGCTGACAAATGCAAGGTCTTGGTGAACATTGAGCAGCAGAGCCCTGATA TTGCTCAGGGTGTGCATGGCCACTTCACCAAGCGCCCTGAGGACATTGGTGCTGGCGACCAAGGTCACATGTTTGGTTAT GCAACTGATGAGACCCCTGAGCTCATGCCACTGAGCCATGTCCTTGCAACCAAACTAGGAGCTAAACTCACTGAGGTTAG GAAGAATGGTACCTGTGCTTGGCTGAGGCCCGATGGCAAGACACAAGTCACCGTTGAGTACTACAATGAGAACGGTGCTA TGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCAACCCAGCATGATGAGACTGTCAGCAATGACCAAATTGCTGCTGAT CTTAAGGAGCATGTCATCAAGCCTGTCATCCCTGAGAAGTACTTGGATGAGAAGACTATCTTCCACCTTAACCCTTCAGG CCGCTTTGTCATTGGTGGCCCTCACGGTGATGCTGGCCTAACCGGAAGGAAGATCATCATTGATACTTATGGTGGCTGGG GTGCTCATGGTGGAGGTGCCTTCTCAGGCAAGGACCCTACTAAGGTTGACAGGAGTGGTGCCTACATTGTGAGGCAGGCA GCAAAGAGTATTGTGGCAAACGGCTTAGCCCGGAGGTGCCTTGTTCAGGTTTCTTATGCTATTGGTGTTCCTGAACCCTT GTCTGTCTTCGTTGACTCTTATGGAACTGGAAGTATCCCTGACAAGGAGATTCTTCAGATTGTGAAGGAGAATTTTGACT TCAGACCTGGAATGATGACCATCAACTTGGACCTTAAGAGGGGTGGAAACAGGTTCATCAAGACAGCTGCATATGGACAC TTTGGAAGGGATGACCCAGACTTCACCTGGGAAGTTGTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA
Protein sequence (LotjaGi1g1v0755600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGY ATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAAD LKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQA AKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILQIVKENFDFRPGMMTINLDLKRGGNRFIKTAAYGH FGRDDPDFTWEVVKPLKWEKPQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 52 | 52 | 7.7E-12 | ||
| SUPERFAMILY | 1 | 60 | 60 | 5.1E-17 | ||
| PANTHER | 1 | 343 | 343 | 4.2E-237 | ||
| TIGRFAM | 1 | 336 | 336 | 1.4E-136 | ||
| CDD | 1 | 334 | 334 | 0.0 | – | |
| PANTHER | 1 | 343 | 343 | 4.2E-237 | – | |
| Gene3D | 1 | 228 | 228 | 2.2E-141 | – | |
| Gene3D | 53 | 332 | 280 | 2.2E-141 | – | |
| SUPERFAMILY | 66 | 190 | 125 | 7.85E-53 | ||
| Pfam | 69 | 189 | 121 | 1.5E-47 | ||
| ProSitePatterns | 70 | 80 | 11 | - | ||
| Gene3D | 91 | 191 | 101 | 2.2E-141 | – | |
| Pfam | 191 | 331 | 141 | 1.0E-61 | ||
| SUPERFAMILY | 191 | 340 | 150 | 2.83E-61 | ||
| ProSitePatterns | 217 | 225 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi1g1v0755600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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