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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0762100 |
| Transcript ID | LotjaGi1g1v0762100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, putative; TAIR: AT2G47490.1 NAD+ transporter 1; Swiss-Prot: sp|O22261|NDT1_ARATH Nicotinamide adenine dinucleotide transporter 1, chloroplastic; TrEMBL-Plants: tr|A0A1J7IQJ4|A0A1J7IQJ4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0762100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133479908..133483071) extracted from Lotus japonicus Gifu genome v1.2.
TTAGGGAACTTTTTTATTGATATAAGTATTTGATATCAAGCCCTTGTAAGTTTCTAGGTGTTAATGGACAAGTTAGCTAA AGGGGATTTTGAAAAAGTTCAGGTGCATGGGTTGATTTTAACTTACTCGAGAAGCTATTATTTAAAAGACTCGTAATCGT TTTCAAGTTTTCTTTGTCTATAACTGCTTGTTGAGAAGTTTATTTTTTCAAATTGGTTTATTGTGAAAGCTTGTCAGTAG GATTATTAATTATTAATGATACTGAATACTGCATTTTTTGTGGATTGGGTGTTCTTTTCAGCGGGCAGGGTAATAGTTGG AAGCTTGGAACAAATATTTCAGAAGGAGGGGTTACGTGGCATGTACCGTGGGCTGGCTCCTACTGTCTTGGCTTTGCTCC CAAATTGGGCAGTGAGTTCTTGCTCCTTGTTAATGTCCTGTTTGCATGTATTATATTCTTAATTCTTAATGAAGTAATCA ACAAATAGAACCTGAGAGAGGTAGGGAGTTAGTTGGAGAGTAAGAGATCGTAGGTTTAAATAGTAGAAATGGAACGTTAT AGAAACTGTCTTGAGATTGAAAAGTAAATTAGGGAGGGAGAGTTCCAGGTCTCTCCAATGCATGGGTTTTATACAGATTT TCTATGAACAAACCCCATTTTCTTCTATTTTCTGAAGCAAGAGTTAGAAAAGTACCTTTCAGTATCTTTGTGCTGTGGCT CACCCCACAACACCATACTCTGCTTCCCTCCGAATCTGTTGACTTCCATAGAGTATAAGCAAAGGGGAGTTACTTTTGGC TGCAGTTTTCATAGCCCAGTTATCATTAGATTACATTGCGATTTGCTTTAGAATGTTATGGATCTAGGCTAGGTCAGATT AGGATTGAATATACGGAACAGCATATGAGGGTAAGAAATATTGACTTTGAATAACCAAAACTGGATACTTGTCAGCTGCG GCTTAAATAGGAAAATTAGACCACTCAGGCTCTGAATTGTTCATGACACAGTAGCGCTATCAATATTACAACAATGAGCC CTAATATTACTTTTGAAGCCAAACTAATAAGATCTCTTGATCTTTAAGCTTATGCCTTTTGGTTTTCCTTGTTGCCTAAT CAATTTAGTTTACTATTGGATAATTTATTACATTAGGGCATTAGGCTGTAGAAATCCCCAAATTTAGTCTATCTAAGTGA TTTTTGAAAGCAGAATAATTTTATCTTCTGTTAGTTCTAAATGTATCCATTTCTAAAATTTCAGGTTTATTTTACTATAT ATGAGCAGCTCAAAAGCCATCTTAATTCTAATGGTTAGTACATCGCTGATTTACTTATCTGTTGAACCAAATAAGGGGGT TATTGATCTTCTGGAGACATTGTTCTGTTTGTGATGTAACCAATACACTAATTGATTTTATGTTTTAAGTTGGCATCTTG CTTGCTAGTTATGTAGATGTACAAATTGTAATAGCTATGCTATATGTGCAGATGAAAGCCATCATCTTTCAGTTGGAGCT AATATGGTAGCTGCTTCTGGTGCTGGAGCTGCAACTACCATGTTTACAAATCCACTTTGGGTTGTCAAGACTAGACTTCA GGTTTGTTTCTTCAGTTTATTCTGAATGTTACACTTATCTATTTGATTATGTTTGCACCTTATCACGTCAATTGACATGA TGCATGATTGCTTGAATTCTCGGTGATGTTTTCAATTTGTACTTTAATACTCTTTTGTTTGTCTATTTACCATTATCATC ATTGAACTCAATACTTTTGACTTTCTTTTCTTTCTGGCATGCTATTTTTAGGATCATGCAAGTTTAATCAAATGCGAAGG TAGTGAAAGCATCATGCTGTTAACATTTTTGGCTTTTTATGTGACATCCATGCAAGATGACAAAACCTCTATTTAGTGAA GGGGGAAAGAACAATCACATAAAAAAGCTATTTAGATGTTTTTGCCTTAAGCAGATCATGTTATCCTTTTAGGAGCATGG GTTTACGAGTGTGCATTGTAGTGATTAGTGTACAGCTTCCCTCATAATAGTTTTGATAAGTTTTATCTTTCATATAAATT TCTGTGTAGTTCTGCACTATAAGTTTGCTGCCTGTCTAATGCAGACCCAGGGAATAAGACCCGGTGTTGTGCCATACAGG AGCACAATATCTGCTTTGAGGAGAATTGCACACGAGGAGGGCATACGGGGGCTGTACAGGTAGGTGTTGTTTACCATGAA TTTTGGTCAATGTATATGATATTATAATTAATAATTAACGATTTAATGACATTTGAGACTTTATTTACCTTATACAGTGG TCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAATTTCCAACATATGAAAGAATAAAATATTATTTGGCAA ATCAAGGTAATTTCATGCCCGCTCTAGTACTTTGTAAAGAAACTCTTTAAGGTAATTTCGTGCCCGCTCGAGTTAGTTTC GACAGTTAATTTGTGTGAGTCCCTATTTTGTATTAGACGACGCAGCAATGAATAAACTTGGTGCACGTGATGTTGCAATT GCCTCATCAATCTCCAAAATTTTTGCATCCACGTTGACATATCCTCATGAGGTATGTTGCTGAATGATTGGCTCGGTTTA GTTTTAGATATCTGTGCACATAGATTATCATACTGCTAGGGTATTTTGAATGAAATCACCTTGCCAATCATTTGATGAAT AAATGGTTTGGAATTCTTCTTCAATGTTTTTGAGCATCTTAGAACAATATTATTTTATCTGTATTTAGTCATCTCTTGAA TATTTTGAGTTTACACTTTTTTCATTCATTTCGTTTATGTAATTGTCAACTTATTCTTGAATGGTCACTTATATGCATTT TTTGGGCAGACAAGTGTTATAATTTGACAATTATTTGTGTTGTATTTGCACAGGTTGTACGCTCCAGACTGCAAGAACAA GGGCACCACTCAGAGAAACGGTACTCCGGTGTGATTGACTGTGTTAGAAAGGTTTTTCAACAAGAGGGTTTACCTGGTTT TTACCGAGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACC GTTTTCTTGTTTCAACTTTTCCTTCTGATCCGCAGTTTTTGTGA
CDS sequence (LotjaGi1g1v0762100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCGTGGGCTGGCTCCTACTGTCTTGGCTTTGCTCCCAAATTGGGCAGTTTATTTTACTATATATGAGCAGCTCAA AAGCCATCTTAATTCTAATGATGAAAGCCATCATCTTTCAGTTGGAGCTAATATGGTAGCTGCTTCTGGTGCTGGAGCTG CAACTACCATGTTTACAAATCCACTTTGGGTTGTCAAGACTAGACTTCAGACCCAGGGAATAAGACCCGGTGTTGTGCCA TACAGGAGCACAATATCTGCTTTGAGGAGAATTGCACACGAGGAGGGCATACGGGGGCTGTACAGTGGTCTTGTACCTGC TCTGGCTGGTATCAGTCATGTTGCCATCCAATTTCCAACATATGAAAGAATAAAATATTATTTGGCAAATCAAGACGACG CAGCAATGAATAAACTTGGTGCACGTGATGTTGCAATTGCCTCATCAATCTCCAAAATTTTTGCATCCACGTTGACATAT CCTCATGAGGTTGTACGCTCCAGACTGCAAGAACAAGGGCACCACTCAGAGAAACGGTACTCCGGTGTGATTGACTGTGT TAGAAAGGTTTTTCAACAAGAGGGTTTACCTGGTTTTTACCGAGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCTG CTGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCAACTTTTCCTTCTGATCCGCAGTTTTTGTGA
Protein sequence (LotjaGi1g1v0762100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRGLAPTVLALLPNWAVYFTIYEQLKSHLNSNDESHHLSVGANMVAASGAGAATTMFTNPLWVVKTRLQTQGIRPGVVP YRSTISALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYERIKYYLANQDDAAMNKLGARDVAIASSISKIFASTLTY PHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSTFPSDPQFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 233 | 233 | 1.0E-139 | – | |
| Gene3D | 1 | 232 | 232 | 5.2E-68 | ||
| Pfam | 1 | 33 | 33 | 2.9E-5 | ||
| ProSiteProfiles | 1 | 29 | 29 | 9.577 | ||
| SUPERFAMILY | 1 | 223 | 223 | 1.44E-65 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| PANTHER | 1 | 233 | 233 | 1.0E-139 | – | |
| PRINTS | 4 | 24 | 21 | 4.0E-5 | ||
| Phobius | 4 | 13 | 10 | - | – | |
| Phobius | 14 | 17 | 4 | - | – | |
| Phobius | 18 | 239 | 222 | - | – | |
| Pfam | 38 | 130 | 93 | 2.9E-22 | ||
| ProSiteProfiles | 39 | 127 | 89 | 22.813 | ||
| PRINTS | 54 | 72 | 19 | 4.0E-5 | ||
| ProSiteProfiles | 139 | 227 | 89 | 24.744 | ||
| Pfam | 145 | 229 | 85 | 5.1E-23 | ||
| PRINTS | 148 | 170 | 23 | 4.0E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0762100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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