Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0769500.1

Overview

Field Value
Gene ID LotjaGi1g1v0769500
Transcript ID LotjaGi1g1v0769500.1
Lotus japonicus genome version Gifu v1.2
Description Epoxide hydrolase 2; TAIR: AT3G05600.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|I6YGS0|EPHA_MYCTU Epoxide hydrolase A; TrEMBL-Plants: tr|A0A0R0F394|A0A0R0F394_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0769500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:134182214..134185380) extracted from Lotus japonicus Gifu genome v1.2.

TAAAGAATTTCATTGATCCATAAAAGCAGGATAAAGTTATCATCATTTGTGGTTTAGACAAATTTCATTCATTATTAATA TGTGTATGACCAAATGCATACATCTATTTCCTCTCTTTTTCTCTCCATCTCTTTTAGTGATCATATCACAGTACTATACT ACTTCTATTTCTCTATTATCTAAATCAAATTTTATTGACTAGTAATATTCCTAGTTTAATGTGTAACAATGCCTTGTCGT ACAGTTTCCCGGCCATGACTAAACCGTGAAAGCTGAACCACATTCCTAGTTAAATCCGTCAACAACAACATCTCTTTCTC ATTCTCTCCCTCTCGTGATAGTAATATATATCACTGTCCACAGTCCTCACCGCACAGCACACAAAGCACCATGGAAACCA TACAACACACGACGGTGGAAGCCAACGGCATCAAAATGCACGTGGCGGAGAAAGGCCAAGGCCCCGTCGTGCTCTTCCTC CACGGCTTCCCGGAGCTCTGGTACACGTGGCGCCACCAGATTCTCTCCCTCAGCGCCCTCGGCTACCGCGCCGTCGCGCC CGACCTCCGCGGCTACGGCGACACCGACGCCCCCGCTTCCGTCACCAGGTACACCTGCTTCCACATTGTCGGCGACGTCG TTGCGCTCATCGACTCGCTTGGCGTCGACCAGGTCTTCCTGGTGGCGCATGACTGGGGAGCTATGATTGGGTGGTACCTC TGCTTGTTCCGCCCTGAGAAAATCAAAGCCTATGTTTGCCTCAGTGTTCCTTTCATGCCCAGAAACCCCAAAGTCAAGCC TGTTGATGCCATGCGTGCTTTGTATGGAGATGATTACTACATCTGCAGATTCCAGGTTCCTCTTTCTTCTTCGTCTTTTT TTTTTAAGTTCACATGAGAACTAATCTTCAGTTCCACTGTCAGCCACACTATGCAAGAGTAACCAATAATTTTTTTTCCA TACGTAAGAATTGAATAATGTTACTTTCATACCTCACTTTGAGGTGGAAAAAGATAGAATGAGGAGAGAGATAGAGAGAA AGTATGAAATATGAGTAGAAATGAAGTGTTTAAAAAATGAAGTGTGTAAATATCATTATTGGTAAGAATTAAGAATCAAA CGCCCAACTTTTTCATCCACTTACTTAGAGTGCTGAATTACTATGCTACCCACCCATTTGGTTTCTTTCTTTTTCTTATA ATAATTCTAACAATAAACTCACTTTACCCATTTTTATTCTTTTGCTATATTTGTAACTATAGTTATTGTTATACTTAATT GTGATAAATTAATAACACGCCATTGAAATATTCTCTCTAACTAACCATGGTAAAGATTTTAATTTGTGGTTCTTGGAGTG GAATGCAATTGTGGCCGCGCGCTTCATGCGATAAGATTTCCAATTTAGTATCCGGAGGTTTTGACCTTTAAATGATCGAT GTCTTTGGAAATTAGATTTTGTATCAAGTTTGATTCTACTTCTACAGTATAAACGTGATTATGTATATTCAATCTGAGAA CAATACACATGAAGGAGTGAAGAGATTTAGGTGTGATTAAATTCTGAATTTAGAATAGTTGACCTATGACCAAGAATATA CTGGGTGGTTTTAATAAAAATCCCAAATTGTAAGAATATATAGTTTTCTTAGATGTAAATTATTAATTGTGTTAGAAATA TAAGCATTCATGTGTCATTTACAAAATAGTTTGAGCTTTTGTGTAATTAGTTGTTTACATGGTATCAAAGGTTCTACCAC TAAGTTATTTGGAGTTTGATTCTTGTCGTCCTAAATTCTTCTAATAAAAAGAAAAAAAAAAATGAATTTCAGCTTTAAGC CCAAGTGGGCTCTTGTACAATGTTGTGTGTTAAAAACATTATTATTCATGTGTCATTTACCCAATAACTTAAATTTTAGG AATAATTGATTATTTATGATAAATTATTGTATATCTTGTATCTTATGCTCAATTAATTCATGGGATAGGAGCCAGGCAAA GCTGAAGCTGAACTGGGTAAAGTTAGCACTGAGTTGGTAATAAAAAACGTGCTCACTGGTCGCCGGCCTGGTCCACCAAT CTTGCCAAAAGAAGGGATGGGGTCCAATCCAGATGCTACGAGACCCCTTCCCTCTTGGTTATCACAAGAAGATGTGGCTT ATTACGCTTCCAAATTCCAAAAGACAGGCTTCACTGGTGGCCTTAACTACTATAGAAACCTAAATTTGTAATATCCTATT TAATTTTTGTCTTTCCCTTCATGCAACTTGGATGATCAATAAATGATTTTTTATGTTGTTTAAATATGTATATCTTGTAC TTGTTGATAGCATATTCATTCTTGTATTTTCAGAAATTGGGAGCTAGCAGCAGCTTGGACTGGAGCACAAGTTAAAGTGC CCGTGAAATTCATCACTGGTGACTTGGATGTAGTGTACACTTCACTAGGGATGAAGGATTATATAAATAGCGGTGCTTTC AAGAGAGATGTGCCAAATTTGGAGGAAGTGGTTATACAAGAAGGGGTGGCTCATTTCAACAACCAAGAAGCAGCTGAAGA AGTCACTAATCACATTTATGATTTTATCAAGAAGTTCTAATCTTATTAACCACTCATTTGTCTCTGCTCACACAGTTTGA TTAAAATAAATCGATTACCACTATGTGGCTATGCATGTGCTACTTGGGCAACTTGATGTTACGTACGTTTGCAGGCTCGT TGATTATTTAAGCTTTGTTTTTGTTCGTGATCGTGACATTGTGGAAACTGGAAATGTACCACTCATTCGAATAGTTTACT TGTCTAGATCGCAGTCCTGAAGTTATAATTTATTTGATTTTGTTATGTTGCTTGAAATTATGCTCGGAGCTGAAGTTATT TAAAGGAAGGAATATAATTCAAATCGTGATTTGAGATTTTGGTAATCATAAGGAATTCTTTACACTATGTGGTGGACCCT CATTTAGGTAAAGCTTGACTAATAATCAAGAACATGAGAAATTTGGGGTCAAATTGTTTGAAAAATTATGAAGTACTACT CCAGTTTTAAAATTATTTAACTACGAAGCGCATGAATTTGGTAGGAGTAGTAGAGGACTTATTCTATTTCTCGTACAAAA ACAAAGTGTGCATTGGGGGTCGGACTACAGTATAGTGCAACAAGTCC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0769500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAACCATACAACACACGACGGTGGAAGCCAACGGCATCAAAATGCACGTGGCGGAGAAAGGCCAAGGCCCCGTCGT GCTCTTCCTCCACGGCTTCCCGGAGCTCTGGTACACGTGGCGCCACCAGATTCTCTCCCTCAGCGCCCTCGGCTACCGCG CCGTCGCGCCCGACCTCCGCGGCTACGGCGACACCGACGCCCCCGCTTCCGTCACCAGGTACACCTGCTTCCACATTGTC GGCGACGTCGTTGCGCTCATCGACTCGCTTGGCGTCGACCAGGTCTTCCTGGTGGCGCATGACTGGGGAGCTATGATTGG GTGGTACCTCTGCTTGTTCCGCCCTGAGAAAATCAAAGCCTATGTTTGCCTCAGTGTTCCTTTCATGCCCAGAAACCCCA AAGTCAAGCCTGTTGATGCCATGCGTGCTTTGTATGGAGATGATTACTACATCTGCAGATTCCAGGAGCCAGGCAAAGCT GAAGCTGAACTGGGTAAAGTTAGCACTGAGTTGGTAATAAAAAACGTGCTCACTGGTCGCCGGCCTGGTCCACCAATCTT GCCAAAAGAAGGGATGGGGTCCAATCCAGATGCTACGAGACCCCTTCCCTCTTGGTTATCACAAGAAGATGTGGCTTATT ACGCTTCCAAATTCCAAAAGACAGGCTTCACTGGTGGCCTTAACTACTATAGAAACCTAAATTTAAATTGGGAGCTAGCA GCAGCTTGGACTGGAGCACAAGTTAAAGTGCCCGTGAAATTCATCACTGGTGACTTGGATGTAGTGTACACTTCACTAGG GATGAAGGATTATATAAATAGCGGTGCTTTCAAGAGAGATGTGCCAAATTTGGAGGAAGTGGTTATACAAGAAGGGGTGG CTCATTTCAACAACCAAGAAGCAGCTGAAGAAGTCACTAATCACATTTATGATTTTATCAAGAAGTTCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0769500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

METIQHTTVEANGIKMHVAEKGQGPVVLFLHGFPELWYTWRHQILSLSALGYRAVAPDLRGYGDTDAPASVTRYTCFHIV GDVVALIDSLGVDQVFLVAHDWGAMIGWYLCLFRPEKIKAYVCLSVPFMPRNPKVKPVDAMRALYGDDYYICRFQEPGKA EAELGKVSTELVIKNVLTGRRPGPPILPKEGMGSNPDATRPLPSWLSQEDVAYYASKFQKTGFTGGLNYYRNLNLNWELA AAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDVPNLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKKF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.1820
1 316 316 1.1E-104
IPR029058
PANTHER
PTHR43329:SF48
2 314 313 1.2E-193 –
PANTHER
PTHR43329
2 314 313 1.2E-193 –
SUPERFAMILY
SSF53474
3 315 313 2.63E-70
IPR029058
Pfam
PF00561
25 137 113 5.6E-21
IPR000073
PRINTS
PR00412
31 49 19 2.9E-41
IPR000639
PRINTS
PR00412
51 66 16 2.9E-41
IPR000639
PRINTS
PR00412
97 110 14 2.9E-41
IPR000639
PRINTS
PR00412
111 124 14 2.9E-41
IPR000639
PRINTS
PR00412
250 266 17 2.9E-41
IPR000639
PRINTS
PR00412
290 312 23 2.9E-41
IPR000639

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0769500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…