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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0770300 |
| Transcript ID | LotjaGi1g1v0770300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G27730.1 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|A0A151TVU4|A0A151TVU4_CAJCA Heparan-alpha-glucosaminide N-acetyltransferase; Found in the gene: LotjaGi1g1v0770300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134263299..134266388) extracted from Lotus japonicus Gifu genome v1.2.
ATGCGCCATGGAATGGCTGCAATCTTGCTGATTTTGTTATGCCTTTCTTCTTGTTCATTGTTGGGATGGCTATTCCACTT TCTCTCAAGGTTAGTTGAGAATGACAAATACTACTTCAACTCTCTGTTTCCCTCATTTCCTCTTCGTTTTTTTTGTTTCA AATCGGTCCTTTACTTATTGATTCCTTCTATTTGATGTCCAGAGAATACCAAATAGACTCCAAGCTGTGATAAAGGTGCT AGTTAGAACACTCAAACTTCTCTTTTGGGGTCTGCTCTTACAAGGTTAGTTTTCCTGTTAAAAATAGAAGTAATATAATA ACTAATAAGTAGGCTAATAATCTCAATGATGAAGGTGGTTTCTCGCATGCTCCGGACCATTTAACATATGGAGTTGACAT GAAACTCATAAGGTGGTGTGGTATACTTCAGGTGATTTTGATTCTTTTGTTCTGCTTATTTTGATAGCATGGAACATAAG TATAGTAAGAGTAGGTAACACTTGTGTTTGTACCTCCTTCTAGAGAATTGCTCTAGCATATTTGGTTGTGGCGCTGGTGG AGATATTTTCAAGAAGTGGACAACCTAGAGATCCTGAACCCACCCAACTTTCAATATTCAAGTTGTACTATTGGCATTGG TTAGTCTGTGATGGTATGAATTTGGTTGATTTCCATTGCCAATAAGATCTTCTTTTTAAACATTTTGTTCATTGAAATTT CAGGGTGGTCGGGGCATGTATACTTACCGTTTACATGGCTTTACTTTATGGAATATATGTTCCTGACTGGAAATTCACTG TCCATGATCCAGACAGCATATATAATGGCACAACTTTCACCGTAAGCTACTCGTTGCTAGCCTCTCTACAAACACTTACA TTAATAGCATGTTTGGATACAATTATGGAATCTAGAAATTACTCATAGATGCTTCTCCCTAGATTGATTCTGGCTCTAGA ATCAATTGTAGAGGAATTTCCAAACATGCACTTAAATAGTGTTAAAATTCATAGGGGAGAATTCCATTTAACTTTTATTC TCTGATAGGTTAAATTATGTCTTCAGTTTTCAATACTTGTATTATCACTTAAATTCATTTTTGAATACATTGTGGTTTCT GCTAGACATGAAATTTGCAAAAAAATTTCATGGGTGCAACTTCTCAATACTCTGAAATTTTTCTTCCTGTTAGCTTTAGC AGTTTCTATGCTTTAATGTATTCAGAAAGAGAATGGTCTAAATATTTATGATTTTTTCCCCTTTGCAGACCTCTCTAATT TGCTTGTCTGTCAATTTTTAGGTTGCATGTGGAGTCAGAGGGAAACTTGATCCCCCTTGTAATGCTGTGGGATATATTGA CAGAGAGATTCTTGGAATTAATCACATGTATAGGCATCCAGCTTGGAAGCGATCTGAAGTGTGTTGCCATTTTCTCCCAG ACACTTTTTTCTACTATAAATCTGTAGCACTTTATGGCTCATGTCAATTTTGAACACTTATTGCCTTTTTGTTTTAAGTG CCGCAGTCTTGCACTGAGAAACCCCCATATGAAGGGCCTTTTAAAAAGGATGCACCTTCATGGTGTTATGCTCCTTTTGA GCCAGAAGGAATTTTAAGGTCAGTAAACAGTCTCCAATTCTTCTTAGAGTATGTTTGGTTTAGCGGAAATCCCAGATATA AGATTAACAACTCCAATTTCTAGATTTCAATCAATTCATAACCACACTGGCTTTGCTTGCTTCAAATGCTAATTGCTATC ATTATATGTGCACTGAAGATGTTTTTCACATTGTTACTGAGAAAAAGAGTTGAGTACTCCCATATTCACTGCTCTTTTGT TTAACAGCTTGGTTAGAGTATGGCATAAATTTTTTTGCATGCAATTTTGATATGCCCCCATTGTTGGGCACACCAGATGT ATAGCTTGTTCCACTGATCCTTAAAGCAATGTCATATGAAACTGCAGCTCAGTATCTGCTATTCTCTCCACTATCATTGG ATTGCATTTTGGACATGTACTCATACACCTGCAGGTAAAGCCTGTGACTCAAAATATCAGTGCTTGGCATCTCTTTTTAA CTTGGGCTTACTGCACTTTTGTGATTTTAGGATCATCCTTCTAGGTTGAAGCACTGGCTTCTACTAGGCTTAGCGCTCCT TACTTCAGGAATTATTCTTCACTTCACTCATGGTGTGAACTCTTAACTTGGTGACGGCTGGAAATTACTATGTAACCATA GATCCATCCTCATTAATAGCATGTTTTGATCAGCTTTTATTTCCACATAGTCAATTATGGCATCCGGAAGCTACTCACAA AAGCTTCTCCCATAATTGGTTTTGTCTTCATAATCAATTGTTGAAGGATTTCCGATCATGCGCTTAATCTGACAGTGCCC CCTCTCATTTCCTTTCTTCCGTTTATGTTACAGCCATTCCTTTGAATAAACAGCTGTACACACTAAGCTATGTATGTGTA ACATCTGGAGCAGCGGCGTTAGTTTTTTCAGCCTTCTATATAACGGTATGTTTTTGGATCTCTACAATGAATACTGGGAA TGGCACTGGCCTTCTTTCTATTATGCTAGATTCTTTTTGTTCACTTTTCTCATCTGGCTCATATAGATAGGTACTACTCT ATCATTGCAGGTTGATATTTGGGGATTAAATTTCTTGTTCATGCCGTTGAAATGGATTGGCATGAATGCCATGCTTGTCT ATGTCATGGCAGCTGAAGGTATCTTTGCAGGATTTATTAATGGGTGGTATTATGGTGACCCTCATAATACACTGGTACCT TGACTACTTTCATCTTATCTAAGTTTCTGCATACTTTGGTTCCATTTAGGCACCATAATCCTTATTTTATATAACTATAT TGATTAGCGCTAGCAACATACTCTCTAACAAGCTTTTTGATGTTTCATTTGTTTTATCTCCAGGTCTATTGGATTCAAAA GCATATATTCATTGGAGTTTGGCATTCAACGAGAGTAGGCATCCTTCTGTATGTGATCTTCGCGGAGATCTTGTTTTGGG CCATCATAGCAGGCATTCTGCATCAATTGGGCATATATTGGAAGCTTTGA
CDS sequence (LotjaGi1g1v0770300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACTCATAAGGTGGTGTGGTATACTTCAGAGAATTGCTCTAGCATATTTGGTTGTGGCGCTGGTGGAGATATTTTC AAGAAGTGGACAACCTAGAGATCCTGAACCCACCCAACTTTCAATATTCAAGTTGTACTATTGGCATTGGGTGGTCGGGG CATGTATACTTACCGTTTACATGGCTTTACTTTATGGAATATATGTTCCTGACTGGAAATTCACTGTCCATGATCCAGAC AGCATATATAATGGCACAACTTTCACCGTTGCATGTGGAGTCAGAGGGAAACTTGATCCCCCTTGTAATGCTGTGGGATA TATTGACAGAGAGATTCTTGGAATTAATCACATGTATAGGCATCCAGCTTGGAAGCGATCTGAATCTTGCACTGAGAAAC CCCCATATGAAGGGCCTTTTAAAAAGGATGCACCTTCATGGTGTTATGCTCCTTTTGAGCCAGAAGGAATTTTAAGCTCA GTATCTGCTATTCTCTCCACTATCATTGGATTGCATTTTGGACATGTACTCATACACCTGCAGGATCATCCTTCTAGGTT GAAGCACTGGCTTCTACTAGGCTTAGCGCTCCTTACTTCAGGAATTATTCTTCACTTCACTCATGCCATTCCTTTGAATA AACAGCTGTACACACTAAGCTATGTATGTGTAACATCTGGAGCAGCGGCGTTAGTTTTTTCAGCCTTCTATATAACGGTT GATATTTGGGGATTAAATTTCTTGTTCATGCCGTTGAAATGGATTGGCATGAATGCCATGCTTGTCTATGTCATGGCAGC TGAAGGTATCTTTGCAGGATTTATTAATGGGTGGTATTATGGTGACCCTCATAATACACTGGTCTATTGGATTCAAAAGC ATATATTCATTGGAGTTTGGCATTCAACGAGAGTAGGCATCCTTCTGTATGTGATCTTCGCGGAGATCTTGTTTTGGGCC ATCATAGCAGGCATTCTGCATCAATTGGGCATATATTGGAAGCTTTGA
Protein sequence (LotjaGi1g1v0770300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLIRWCGILQRIALAYLVVALVEIFSRSGQPRDPEPTQLSIFKLYYWHWVVGACILTVYMALLYGIYVPDWKFTVHDPD SIYNGTTFTVACGVRGKLDPPCNAVGYIDREILGINHMYRHPAWKRSESCTEKPPYEGPFKKDAPSWCYAPFEPEGILSS VSAILSTIIGLHFGHVLIHLQDHPSRLKHWLLLGLALLTSGIILHFTHAIPLNKQLYTLSYVCVTSGAAALVFSAFYITV DIWGLNFLFMPLKWIGMNAMLVYVMAAEGIFAGFINGWYYGDPHNTLVYWIQKHIFIGVWHSTRVGILLYVIFAEILFWA IIAGILHQLGIYWKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 335 | 335 | 6.5E-153 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 335 | 335 | 6.5E-153 | – | |
| Phobius | 6 | 26 | 21 | - | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 27 | 46 | 20 | - | – | |
| TMHMM | 45 | 67 | 23 | - | – | |
| Phobius | 47 | 68 | 22 | - | – | |
| Phobius | 69 | 156 | 88 | - | – | |
| Phobius | 157 | 178 | 22 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 179 | 189 | 11 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 190 | 210 | 21 | - | – | |
| Phobius | 211 | 215 | 5 | - | – | |
| Phobius | 216 | 240 | 25 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 241 | 260 | 20 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 261 | 280 | 20 | - | – | |
| Phobius | 281 | 306 | 26 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 307 | 326 | 20 | - | – | |
| Phobius | 327 | 335 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0770300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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