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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0771000 |
| Transcript ID | LotjaGi1g1v0771000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein, putative; TAIR: AT5G27690.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q84J88|HIP36_ARATH Heavy metal-associated isoprenylated plant protein 36; TrEMBL-Plants: tr|A0A151TVX3|A0A151TVX3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0771000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134316038..134317915) extracted from Lotus japonicus Gifu genome v1.2.
CTACTGCTTAGTGAATTAACCGTGAAGAGATTAATTAGTCTCACAATTATCGGTTGCAAGGATGTCTTGATTAAGAATAA AAAAAGTTATATATTGGAAGAAGAGGTGTGGTTTAGATGATAGAAGGGAGAGAGGAATCTTTGTAAACATTGTAAACAGT GACTCCATTGTAGAAGGGGAAAGTCTCATGGAGAGACTTCTTTCCGTTTCCATTTTCTATATTGTTCCCTCTACTTTTCA CTATATTTTCAGTTATGGTATGTGGATTCCGATCACCCACATTAAAATGGCATATGCTAATGGGGGCTGATTGTGACTGA AAGGAAAAGAAAAAGAAGTGATGAGGCATCTGATGCTGTATTGATAAATTGATAGGTCTCTAGACTCTAGTGTACAAATT GAATTCATCTTCAATTACCTCTGCCACTACTCATTCAAGATATTGTTTCTGTATCAACAAGATTTCTCTTGTTATACATA TTCTTTTTTGGTGCCCTTAACCTTTTTTCAATGCCAAATTCTTAAATCCTTATTATTCCTTTGCTTCCTAAGCATTTCCA CCAGTTTCAGACCATCTCTATCTAGTTTCTATCTTCTGAAAATGGAAGCACCAGCAGAACCAAAACCAGAAGCTAAAGAA CCAGAAGAACAACAACATCTAGGACTAGAACCACTCATGTGCAAGGTAAAGCACTGTTCTACAATTTACTCTCCTCTTTT CAGTTTACCAATTCTCTTTCCCCGCAGGTTCTAATCCTCTTACGCCTCTGTTTATCAGAGCTGTGTGTTGAAAGTCTCCA TCCACTGTCAAGGCTGCACAAGGAAAGTCAAAAAAGTTCTTCAGAGCATAGATGGTAATGAAATTTGAAACCAAACACTT CCAGTTTCAGTGTGTCTTACGATTTGAGTTATTTGATTTCAATTTCAATTCCTCATGAACTCAGGTGTTTATCACACAAC CATTGATCTGAAGCAGCAAAAAGTAGTGGTAATGGGGAACGTGGACAGTGATATTCTGATTAAGAAGTTAACCGCGACGG GGAAACGAGCTGAATTATGGCCGGAAATGGCAGATGCGATCAAGAAGAAGAAAAAGAAGAAGAAGAAAAAGAAAAAGAAG AACAAGGAAAATTCGGAAAACAAAGAGGTACAGACTGAGCCAGAGAGCGGTGAAGATAGCGACCAGAGCGGCGATGGCAA CGAGAAGGAAGCTATCAAGGTTGTGGTTCAAGGCGGTCCTGAGGGCGGGAACATGAATAGAAATGGGGGAACCTGTAGAG GCAGTGTGCAATTTCAAGAGCTGAAGCCGGAGGTGAGGCACGTGATGATGTTACCGGCTGGTTATCAGCCATCGATGGCA GCGGAGAAGAAGGTTACCATCGGCGGTGATGGTCATGGGAATGGCGGGGATTGTGGATACCCTCCATCGCATTACCATGC ACCAGCATCTCCGATGTATCATCATACAAAATATCATGATCAACACAATCCCATGAGATACAATACATCGTATTATACTA CTCCAGAACCGTATTCGAACGCTCACGTGTATGAAGGTACTGTGCCCGAATTGGAAAGTTTTACGTATACGTCACAACCC TCGTCATATTCGTTCGAATTATTAAGCGATGAAAATCCTAATGCATGTTCAGTCATGTGATGAGTGATATGTCAGTTGAA TTGCAAGTTTGCAACTACCCTAGCCGACTTTCTTTTGTGATTAGTTGATATTATGATGTAATTAGCTTTTGTTAATCTCA TGGTGCTTTGTTGAATCTAAATTATAAACACCAGCTTTGTCAGCTTCAAACTATTGAGGCAAAGTGGCTAGATGCTTTAT GTGTGTTGGATATTCATGTGTTAACTAGTAACTACGAC
CDS sequence (LotjaGi1g1v0771000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCACCAGCAGAACCAAAACCAGAAGCTAAAGAACCAGAAGAACAACAACATCTAGGACTAGAACCACTCATGTG CAAGAGCTGTGTGTTGAAAGTCTCCATCCACTGTCAAGGCTGCACAAGGAAAGTCAAAAAAGTTCTTCAGAGCATAGATG GTGTTTATCACACAACCATTGATCTGAAGCAGCAAAAAGTAGTGGTAATGGGGAACGTGGACAGTGATATTCTGATTAAG AAGTTAACCGCGACGGGGAAACGAGCTGAATTATGGCCGGAAATGGCAGATGCGATCAAGAAGAAGAAAAAGAAGAAGAA GAAAAAGAAAAAGAAGAACAAGGAAAATTCGGAAAACAAAGAGGTACAGACTGAGCCAGAGAGCGGTGAAGATAGCGACC AGAGCGGCGATGGCAACGAGAAGGAAGCTATCAAGGTTGTGGTTCAAGGCGGTCCTGAGGGCGGGAACATGAATAGAAAT GGGGGAACCTGTAGAGGCAGTGTGCAATTTCAAGAGCTGAAGCCGGAGGTGAGGCACGTGATGATGTTACCGGCTGGTTA TCAGCCATCGATGGCAGCGGAGAAGAAGGTTACCATCGGCGGTGATGGTCATGGGAATGGCGGGGATTGTGGATACCCTC CATCGCATTACCATGCACCAGCATCTCCGATGTATCATCATACAAAATATCATGATCAACACAATCCCATGAGATACAAT ACATCGTATTATACTACTCCAGAACCGTATTCGAACGCTCACGTGTATGAAGGTACTGTGCCCGAATTGGAAAGTTTTAC GTATACGTCACAACCCTCGTCATATTCGTTCGAATTATTAAGCGATGAAAATCCTAATGCATGTTCAGTCATGTGA
Protein sequence (LotjaGi1g1v0771000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAPAEPKPEAKEPEEQQHLGLEPLMCKSCVLKVSIHCQGCTRKVKKVLQSIDGVYHTTIDLKQQKVVVMGNVDSDILIK KLTATGKRAELWPEMADAIKKKKKKKKKKKKKNKENSENKEVQTEPESGEDSDQSGDGNEKEAIKVVVQGGPEGGNMNRN GGTCRGSVQFQELKPEVRHVMMLPAGYQPSMAAEKKVTIGGDGHGNGGDCGYPPSHYHAPASPMYHHTKYHDQHNPMRYN TSYYTTPEPYSNAHVYEGTVPELESFTYTSQPSSYSFELLSDENPNACSVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 196 | 188 | 1.3E-66 | – | |
| PANTHER | 9 | 196 | 188 | 1.3E-66 | – | |
| SUPERFAMILY | 25 | 93 | 69 | 9.49E-16 | ||
| Gene3D | 26 | 91 | 66 | 2.0E-17 | – | |
| CDD | 31 | 90 | 60 | 8.92661E-13 | ||
| Pfam | 33 | 85 | 53 | 8.7E-14 | ||
| ProSiteProfiles | 35 | 91 | 57 | 11.687 | ||
| Coils | 95 | 125 | 31 | - | – | |
| MobiDBLite | 100 | 140 | 41 | - | – | |
| PANTHER | 212 | 291 | 80 | 1.3E-66 | – | |
| PANTHER | 212 | 291 | 80 | 1.3E-66 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0771000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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