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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0781100 |
| Transcript ID | LotjaGi1g1v0781100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin; TAIR: AT2G27030.3 calmodulin 5; Swiss-Prot: sp|P04464|CALM_WHEAT Calmodulin; TrEMBL-Plants: tr|C6T231|C6T231_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0781100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135357121..135363143) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTCGTATTTTCTTTCACATCACCTATCAAATTATTTATTTATTATTTTTCACATTTGATCAAGTTGGAGATGTATT ACATATGAACAACTATTTTTTCAAGAAAACAAACATTAATCTGGTAACGTACATTTTGGGGGAATTGAGGTCATTTAAGG AGTGTCAGCACCGACACAACCATTTTTCTTCTCCGTACATATCATTTTTCAAATAACAAATCGAAAGTGTCATACTCCAA GATATGTATTTGCTAATTAAGATATTTTTTTCAAAACTTGTACTTTCTGAACATTTATTTGCCTCATTCACTGGAAGGTG CAAACTGGAAACTTGAATTGGTCAAAGGAAATACTATGCATGCATACAATTCCAAGAGCGAAGAAAATGACACCCCTTTC TGGATCTCTAAAGTGCTTAAATGTTGAGCTGCTAGTTGCTTAGTTAAATAAAAAGAAGCATGAGGGAAGAGCAAATTGGT GAGTTTCTTGAAGCCTTCTGTCTTTTTGACAAAGATGGAGATGGTTAGTACTTACCCTTAATTATATATAGTCTCTCATA ATGTTAATTTGTTCAATTCATTTGATGCTTTGCATCCTTTGTTGCTTAATGAATTTGATATTTTTTCTTACATTTGATAT TGACACGTGTATTTTGTTATAAAATTGTTGGAAAAAAAGGGTGCATAACCATGGAAGAATTAGGCACTGCAATCAGAGCA CTAGATTTACATCCGACGGTGGAAGAGTTGCAAATTATGATGAATGAAGTCGATACAGATGGGAACGGAACCATAGAATT CGAGGAATTCTTGAATCTCATGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAGGAACTGATGGAAGCTTTCAGGGTGT TTGACAAGGATCAAGATGGTTACATATCCCCCAGTGAGGTTCAATTAAAATTAAATATTAGTACTTGCTTCTGGAACAAC CATATTTGATGGTAATAATTTGTTTATTTCATGTAATTGATATGTGTATATAATGTTTGTGTGTTGGCAGATGAGATCTG TATTGAGAACAGTAGGAGAGAAGGTGACAGATGAGGAGCTGGGGCAGATGATAAAAGTGGCTGATTTGGATGGTGATGGT CTTCTTGATTATCAAGACTTCGTTAGGATGATGTTGGCTGCTTGATTACCAAAATTAAACTGATCAGGATTACAATAATA CATGTATTATTGGTATAATATTTTGATTAATTGATCATTTAGCATTTCCTATATGTATGCAGGCAACTATTATAGCTAGA TTATCTTATCTTTCAATAGCTGTAGCTGTACTTTTTAGATTTTTTTTGTTTTCAACAGATAGAATTATATTCAATGTTTT ATTGCACCTCTCAAATGAGACAGTTGTTACCAGTAAAAGATAAGATATTGTACAAATTTAAATCCCGAAAAAGATATTTG TTATGAGAGATATGCAATCGTCATAAGATAAGCTTTCTTCTCATTTTGAATTTCTCATTCTTCTTTCTAGTGGACAAGCT TTCTTTGAAGGGCCTGCTTCTTCTCAAAAGGAATCTGTCATCAAATATCAATGGTGGGAAAATAATATACAAGAATCCTA TGTTTCCTTCAGATTTCAGAAGACCTCATCACTATGGTCTTTTCCTAATTTAAATAATCAAAACTTGATCAAATTTACTC ATATCATGTTAAATTTAGGATTAATTAAGTTTAGGATTAATTAAGTTTTTGGTCCATATGTAATAGGCGAAGTATAGTCG ACTATATAGTCCCTGTCAAAGTAAAGTTTTAATATTGTCCATAATTTTTGGAAAATTATATAATTTTGGTGGTATTCGGA GGTGGGGGTCCAACTAATTTAAATATAGTGACATATTCAGTGATGAAAACATTGCCCCTTCTGACACATCCAGTGACGAA ATTAAATTCAAAGAATATAAGTGAAATTGAGTGCATCTTTTATATAAATGCAAAGGGGATAGGAGTTTGAGATTACTGAG AAACCAAAATGGCTGCAGAGAAAAGTGGATTGATTCCTCGTGTGAAACTAGGAACCCAGGGCTTTGAGGTATTATAATTC TTCATATTTTCTCATAACATACTACTAGCAATAAGCCAATAACATGTCAATGAAATGTTCTAGAATTGCTTTTTATTAGA AATTTCAAGTCTTAGCTTCTATGTCAACATGGGATTGTGAAACCAAAGATGCACTTATTGAAAGACTAAATTTTCATTCA CCCTCATTTTTCTCAAAACCCTACCAGGGTGTGTGAAAAATTGAGTTGATACAAAGGGGCAGGGCATAAGAAAAAGTAGG TGTGAAAAAATCAAACTGAGATTCTTGTTTCACACCTTTTTGTTTTTAGGTTTCAAAACTGGGATTTGGGTGTATGGGAC TCAGTGGAGCCTACAATGACCCTGTTTCTGAAGAGGATGGTTTATCTATTATTAAGTATGCATTCAGCAAAGGGGTCACT TTCTTTGATACTGCTGATGTTTATGGAGCTGCTGGTGCAAATGAACTTTTGGTTGGAAAGGTATAACAAACTACAAAGGA TTTCATTTTCCTTTCTATTGTACTACTTATGTTCTACATAATTGAAATTCAACTTTCTGTTCCAAAAGTTGCCCCATTCT TTTGCAATGATTCTTTGGAACCACTAACTGAGTTTGTTATTATATCCCATGATTCTGCTGACTCTAGGCTTTAAAGCAAC TACCTAGAGAAAAGGTCGAGTTAGCGACCAAATTTGGTATCTCGAGATCACAATCAAGAGATTTTTCTGGTATGATTGTC AAGGGCTCGCCTGATTATGTGCGCTCATGCATTGAAGCTAGCTTGAAACGTCTCGATGTTGAATACATTGATCTCTATTA TCAGCACAGGGTAGACACATCTGTACCAATAGAGGACACAGTGAGTTTCTCTCTTGTGTAATCTGAAAATGAGATTTTTA ACAAAGTACACATTATATACCTGTTAATTTTTAATTTTTTTTTTCTGTTATAGGTAGGTGAACTTAAGAAATTGGTGGAA GAGGGAAAAATCAAGTATATTGGATTATCTGAAGCCAGCCCTGATACAATAAGGAGAGCACATGCAGTTCATCCCATCAC GGCTGTACAAATAGAGTGGTCCCTCTGGACTCGCGACATTGAGGAGGAGCTAGTTCCTCTCTGCAGGTTAGTTTGAGTTC TTCTCCAAGTTCATAGGATAGGAATGCAGCTTCCATTCCTGACTGTTTCTTCAGTAAAAAGTGTTTTGAAGAATGAGCTA CTTGAAAAGATAGATATAAAAAGAATCAATTGCTGTTGTATACATGGTTGTATTAATATGACTTAGCATTTTTTATGCTT TATTGATGCAGAGAGCTTGGTATTGGAATTGTACCATATAGCCCTCTTGGTCGTGGCTTTTTTGGCGGCAAAGGAGTTGT GGAAAGTATGCCTGCAATTAGCTCCCTGGTAAAGTATTTTAGCACTTAATCGTTAGTTTTTGCTGCATGCCCTGAAATTT TTAGGATAAGATGGGGAAAATTATCTAATAGCAATGATAAATTCTGAATCTTTAACTATTTGATATTTTGAACGGTTGGT GTCTTATTTTTACAATGTGTATATGTCCATTCAATTGCAAATACTTGTGCATGTCCTTACTTTTTTGTCATGTATCAATG ATGGTTAAAAAAGTATAAAAATTAGACTAAATTTCTTTCCTGGAAAAAATGTGCTGTTTAATTTCCTGATGGTTAACTCA TTTATCAGAAGACTTCACATCCCCGCTTCCAAGCTGAGAACTTGGAAAAGAACAAGAGTATATATGACCGAGTAGACAAT CTTGCTAAGAAGCATCAGGCCACTCCGGCTCAGTTGGCATTAGCATGGGTACTCCATCAAGGCGAGGATGTTGTGCCTAT TCCTGGTAAGTGACAAAATATGTATTTATTTCACATAGTACATCACAAAATATCTCTGATAAGTGATACCCGCTAGCTAT TATGTGATGTGTATCAGAACAAATTATGAGGCATGGTATATTTCTCGCATTGAACTTGTGCACTGCTCAAATAATTGAAA CCAACGTGAATGCGAGTTAACTCTGATAGATCAAAGATCTTTCTTTCACATTTATTACTTGGGAAAGTGTCCTTGCTGTT TTGGATTTTATGTTAACGGCGTTGATGGGGAATACAAACACACTGTAAGTGCGCTAAGCCGCTAACGATGTGTCTCCACT TAATAGACTTTAATCACAATCTATAAGAAGAGTTTCGTTCACTTTTTGTTTGGTGCCATTGGATGTCCAAACATAGCTTG AAGTGTTTTTTTCTTTTTCCAAAAGTATGGGGGTATTTTCTTTTGTTATCTATCCAATATTCCAAAATTCTTGAAACTCA AGACTTCTAACTTCTCCCTTGTCACTAATAACTATTAAGTAGTCTATATAGTATCCTGGGATTTCTTTTCACCTTTCTAC TTGTCTTTCTGCTACTCAACCAAGAAGCATATATGTCTTTTCTGTTTATCCATGTTTTGTTGTGTAAGTGTACAGTTGTT TATACCTTGACAGGAACAACGAAGATTAAGAATCTAGATCAAAATATCGGTGCCTTAGCAGTGAAACTATCGGAAGAGGA CCTGAGAGAGATTTCTGAGTCGGTTCCCGCTGATGATGTAGCGGGCGGGAGATACTACAATGGACTCGATCATTTTTCTT GGAAGCTTGCTAACACGCCTGCAAAAGATTCGAAGATCTCAACCTGAAGTACTCTGAATCCTTTTCAGTTAGAAATTGCT CTTAGTCATGATTTAAGGGCAGCAAGGTTGATAGAAGCAAATATCTGGAATCTATCTGAAACTAAACATCACAGTTTCAC CAAAGTCTGTGTTGTTAATTATGCTTTTCCCCATCGCTCACGGGGAGATTGAAGAATTGAAGAAGAAAATGTTGCATTAA TATTACTATTCACATAATGTTCCTCTGTATGCATGCTTATGTATTTGTGTATTTTCTACTAATAAATTTGCAGCTAGACA TTTCCCATTTTTAATGTGCTAATATCATGAACAAAAAAATTAACTGCCGGAAGGCTTACTCTAGAGTTATGAAACATTCT TATTGGTCAAAGCAAACACTATGCATGCATACAATTCCAAGAGCAAAGAAAATGACACCCCTTTCTGCATCTCTAAAGTG CTTAAATGTTGAGCTGCTAGTTGCTTAGTTAATACCTTCTAATCTTTTTTAAATAAAAAGAAGCATGAGGGAAGAGGAAA TTGGTGAGTTTCTTGAAGCCTTCTGTCTTTTTGACAGAGATGGCGATGGTAAGTACTGCTTACCCTTAATTATATATAAT CTCAATAGATCCTCATATAATGTTAATTTGTTCAATTCATTTGATGCTTTGCATCCTTTGTTCCTTAATTAATTTTACGC TTTTTTGTTCTGCCTTACTATAGAATTCGGTGACATTTATATTATTGTTGGAAAAAAGGGTTCATAACCATGGAAGAATT AGGCACTGCAATCAGAGCACTAGATTTTAATCCGAGGGTGGAAGAGTTGCAAATTATGATGAACGAAGTGGATACAGATG GGAACGGAACCATAGAATTTGAGGAATTCTTGAATCTCATGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAGGAACTA ATGGAATTTGTGTATCCACAAACAGTTCTTTACCCTCGAGGTCCATTTGAGTTAAGGGTCTATAATGTAAAGGAGAGAAG ATCTATTAAACATTTTCCTTCCAGTCCTTTCAAACATGAGTCACCTACGTTATGGATTCTACCACCATTCCATTGGGACT GATCAATGTAAGTTAGAGTATTCTGTTTTTTTATTTATTAATTTTTCACGTTTCATCATATTCATCTTAATATTGTCAAT GCCATTGATTGTACCCCTTTATGCTTGCTAAATGAATATTACTAGTGTTTTTTTACCCGCGCGTTACACGGAGAATATGT TTATGGTATTTGATACATCAATT
CDS sequence (LotjaGi1g1v0781100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGAAGAGCAAATTGGGTGCATAACCATGGAAGAATTAGGCACTGCAATCAGAGCACTAGATTTACATCCGACGGT GGAAGAGTTGCAAATTATGATGAATGAAGTCGATACAGATGGGAACGGAACCATAGAATTCGAGGAATTCTTGAATCTCA TGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAGGAACTGATGGAAGCTTTCAGGGTGTTTGACAAGGATCAAGATGGT TACATATCCCCCAGTGAGATGAGATCTGTATTGAGAACAGTAGGAGAGAAGGTGACAGATGAGGAGCTGGGGCAGATGAT AAAAGTGGCTGATTTGGATGGTGATGGTCTTCTTGATTATCAAGACTTCGTTAGGATGATGTTGGCTGCTTGA
Protein sequence (LotjaGi1g1v0781100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREEQIGCITMEELGTAIRALDLHPTVEELQIMMNEVDTDGNGTIEFEEFLNLMARKMKESEAEQELMEAFRVFDKDQDG YISPSEMRSVLRTVGEKVTDEELGQMIKVADLDGDGLLDYQDFVRMMLAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 55 | 52 | 2.7E-17 | – | |
| PANTHER | 6 | 129 | 124 | 1.9E-62 | – | |
| PANTHER | 6 | 129 | 124 | 1.9E-62 | – | |
| ProSiteProfiles | 7 | 24 | 18 | 6.145 | ||
| CDD | 7 | 55 | 49 | 5.48862E-11 | ||
| SUPERFAMILY | 7 | 128 | 122 | 1.49E-42 | ||
| Pfam | 7 | 56 | 50 | 2.2E-14 | – | |
| ProSiteProfiles | 25 | 60 | 36 | 14.486 | ||
| SMART | 29 | 57 | 29 | 8.0E-7 | ||
| PRINTS | 33 | 54 | 22 | 4.1E-5 | – | |
| ProSitePatterns | 38 | 50 | 13 | - | ||
| Gene3D | 56 | 130 | 75 | 1.6E-29 | – | |
| ProSiteProfiles | 62 | 97 | 36 | 16.689 | ||
| Pfam | 64 | 127 | 64 | 9.0E-17 | ||
| CDD | 66 | 127 | 62 | 2.56466E-19 | ||
| SMART | 66 | 94 | 29 | 3.3E-7 | ||
| ProSitePatterns | 75 | 87 | 13 | - | ||
| PRINTS | 80 | 98 | 19 | 4.1E-5 | – | |
| ProSiteProfiles | 98 | 130 | 33 | 12.728 | ||
| SMART | 102 | 130 | 29 | 6.3E-4 | ||
| ProSitePatterns | 111 | 123 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0781100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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