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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0781100 |
| Transcript ID | LotjaGi1g1v0781100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin; TAIR: AT3G22930.1 calmodulin-like 11; Swiss-Prot: sp|Q9LIK5|CML11_ARATH Calmodulin-like protein 11; TrEMBL-Plants: tr|C6T231|C6T231_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0781100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135357121..135363143) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTCGTATTTTCTTTCACATCACCTATCAAATTATTTATTTATTATTTTTCACATTTGATCAAGTTGGAGATGTATT ACATATGAACAACTATTTTTTCAAGAAAACAAACATTAATCTGGTAACGTACATTTTGGGGGAATTGAGGTCATTTAAGG AGTGTCAGCACCGACACAACCATTTTTCTTCTCCGTACATATCATTTTTCAAATAACAAATCGAAAGTGTCATACTCCAA GATATGTATTTGCTAATTAAGATATTTTTTTCAAAACTTGTACTTTCTGAACATTTATTTGCCTCATTCACTGGAAGGTG CAAACTGGAAACTTGAATTGGTCAAAGGAAATACTATGCATGCATACAATTCCAAGAGCGAAGAAAATGACACCCCTTTC TGGATCTCTAAAGTGCTTAAATGTTGAGCTGCTAGTTGCTTAGTTAAATAAAAAGAAGCATGAGGGAAGAGCAAATTGGT GAGTTTCTTGAAGCCTTCTGTCTTTTTGACAAAGATGGAGATGGTTAGTACTTACCCTTAATTATATATAGTCTCTCATA ATGTTAATTTGTTCAATTCATTTGATGCTTTGCATCCTTTGTTGCTTAATGAATTTGATATTTTTTCTTACATTTGATAT TGACACGTGTATTTTGTTATAAAATTGTTGGAAAAAAAGGGTGCATAACCATGGAAGAATTAGGCACTGCAATCAGAGCA CTAGATTTACATCCGACGGTGGAAGAGTTGCAAATTATGATGAATGAAGTCGATACAGATGGGAACGGAACCATAGAATT CGAGGAATTCTTGAATCTCATGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAGGAACTGATGGAAGCTTTCAGGGTGT TTGACAAGGATCAAGATGGTTACATATCCCCCAGTGAGGTTCAATTAAAATTAAATATTAGTACTTGCTTCTGGAACAAC CATATTTGATGGTAATAATTTGTTTATTTCATGTAATTGATATGTGTATATAATGTTTGTGTGTTGGCAGATGAGATCTG TATTGAGAACAGTAGGAGAGAAGGTGACAGATGAGGAGCTGGGGCAGATGATAAAAGTGGCTGATTTGGATGGTGATGGT CTTCTTGATTATCAAGACTTCGTTAGGATGATGTTGGCTGCTTGATTACCAAAATTAAACTGATCAGGATTACAATAATA CATGTATTATTGGTATAATATTTTGATTAATTGATCATTTAGCATTTCCTATATGTATGCAGGCAACTATTATAGCTAGA TTATCTTATCTTTCAATAGCTGTAGCTGTACTTTTTAGATTTTTTTTGTTTTCAACAGATAGAATTATATTCAATGTTTT ATTGCACCTCTCAAATGAGACAGTTGTTACCAGTAAAAGATAAGATATTGTACAAATTTAAATCCCGAAAAAGATATTTG TTATGAGAGATATGCAATCGTCATAAGATAAGCTTTCTTCTCATTTTGAATTTCTCATTCTTCTTTCTAGTGGACAAGCT TTCTTTGAAGGGCCTGCTTCTTCTCAAAAGGAATCTGTCATCAAATATCAATGGTGGGAAAATAATATACAAGAATCCTA TGTTTCCTTCAGATTTCAGAAGACCTCATCACTATGGTCTTTTCCTAATTTAAATAATCAAAACTTGATCAAATTTACTC ATATCATGTTAAATTTAGGATTAATTAAGTTTAGGATTAATTAAGTTTTTGGTCCATATGTAATAGGCGAAGTATAGTCG ACTATATAGTCCCTGTCAAAGTAAAGTTTTAATATTGTCCATAATTTTTGGAAAATTATATAATTTTGGTGGTATTCGGA GGTGGGGGTCCAACTAATTTAAATATAGTGACATATTCAGTGATGAAAACATTGCCCCTTCTGACACATCCAGTGACGAA ATTAAATTCAAAGAATATAAGTGAAATTGAGTGCATCTTTTATATAAATGCAAAGGGGATAGGAGTTTGAGATTACTGAG AAACCAAAATGGCTGCAGAGAAAAGTGGATTGATTCCTCGTGTGAAACTAGGAACCCAGGGCTTTGAGGTATTATAATTC TTCATATTTTCTCATAACATACTACTAGCAATAAGCCAATAACATGTCAATGAAATGTTCTAGAATTGCTTTTTATTAGA AATTTCAAGTCTTAGCTTCTATGTCAACATGGGATTGTGAAACCAAAGATGCACTTATTGAAAGACTAAATTTTCATTCA CCCTCATTTTTCTCAAAACCCTACCAGGGTGTGTGAAAAATTGAGTTGATACAAAGGGGCAGGGCATAAGAAAAAGTAGG TGTGAAAAAATCAAACTGAGATTCTTGTTTCACACCTTTTTGTTTTTAGGTTTCAAAACTGGGATTTGGGTGTATGGGAC TCAGTGGAGCCTACAATGACCCTGTTTCTGAAGAGGATGGTTTATCTATTATTAAGTATGCATTCAGCAAAGGGGTCACT TTCTTTGATACTGCTGATGTTTATGGAGCTGCTGGTGCAAATGAACTTTTGGTTGGAAAGGTATAACAAACTACAAAGGA TTTCATTTTCCTTTCTATTGTACTACTTATGTTCTACATAATTGAAATTCAACTTTCTGTTCCAAAAGTTGCCCCATTCT TTTGCAATGATTCTTTGGAACCACTAACTGAGTTTGTTATTATATCCCATGATTCTGCTGACTCTAGGCTTTAAAGCAAC TACCTAGAGAAAAGGTCGAGTTAGCGACCAAATTTGGTATCTCGAGATCACAATCAAGAGATTTTTCTGGTATGATTGTC AAGGGCTCGCCTGATTATGTGCGCTCATGCATTGAAGCTAGCTTGAAACGTCTCGATGTTGAATACATTGATCTCTATTA TCAGCACAGGGTAGACACATCTGTACCAATAGAGGACACAGTGAGTTTCTCTCTTGTGTAATCTGAAAATGAGATTTTTA ACAAAGTACACATTATATACCTGTTAATTTTTAATTTTTTTTTTCTGTTATAGGTAGGTGAACTTAAGAAATTGGTGGAA GAGGGAAAAATCAAGTATATTGGATTATCTGAAGCCAGCCCTGATACAATAAGGAGAGCACATGCAGTTCATCCCATCAC GGCTGTACAAATAGAGTGGTCCCTCTGGACTCGCGACATTGAGGAGGAGCTAGTTCCTCTCTGCAGGTTAGTTTGAGTTC TTCTCCAAGTTCATAGGATAGGAATGCAGCTTCCATTCCTGACTGTTTCTTCAGTAAAAAGTGTTTTGAAGAATGAGCTA CTTGAAAAGATAGATATAAAAAGAATCAATTGCTGTTGTATACATGGTTGTATTAATATGACTTAGCATTTTTTATGCTT TATTGATGCAGAGAGCTTGGTATTGGAATTGTACCATATAGCCCTCTTGGTCGTGGCTTTTTTGGCGGCAAAGGAGTTGT GGAAAGTATGCCTGCAATTAGCTCCCTGGTAAAGTATTTTAGCACTTAATCGTTAGTTTTTGCTGCATGCCCTGAAATTT TTAGGATAAGATGGGGAAAATTATCTAATAGCAATGATAAATTCTGAATCTTTAACTATTTGATATTTTGAACGGTTGGT GTCTTATTTTTACAATGTGTATATGTCCATTCAATTGCAAATACTTGTGCATGTCCTTACTTTTTTGTCATGTATCAATG ATGGTTAAAAAAGTATAAAAATTAGACTAAATTTCTTTCCTGGAAAAAATGTGCTGTTTAATTTCCTGATGGTTAACTCA TTTATCAGAAGACTTCACATCCCCGCTTCCAAGCTGAGAACTTGGAAAAGAACAAGAGTATATATGACCGAGTAGACAAT CTTGCTAAGAAGCATCAGGCCACTCCGGCTCAGTTGGCATTAGCATGGGTACTCCATCAAGGCGAGGATGTTGTGCCTAT TCCTGGTAAGTGACAAAATATGTATTTATTTCACATAGTACATCACAAAATATCTCTGATAAGTGATACCCGCTAGCTAT TATGTGATGTGTATCAGAACAAATTATGAGGCATGGTATATTTCTCGCATTGAACTTGTGCACTGCTCAAATAATTGAAA CCAACGTGAATGCGAGTTAACTCTGATAGATCAAAGATCTTTCTTTCACATTTATTACTTGGGAAAGTGTCCTTGCTGTT TTGGATTTTATGTTAACGGCGTTGATGGGGAATACAAACACACTGTAAGTGCGCTAAGCCGCTAACGATGTGTCTCCACT TAATAGACTTTAATCACAATCTATAAGAAGAGTTTCGTTCACTTTTTGTTTGGTGCCATTGGATGTCCAAACATAGCTTG AAGTGTTTTTTTCTTTTTCCAAAAGTATGGGGGTATTTTCTTTTGTTATCTATCCAATATTCCAAAATTCTTGAAACTCA AGACTTCTAACTTCTCCCTTGTCACTAATAACTATTAAGTAGTCTATATAGTATCCTGGGATTTCTTTTCACCTTTCTAC TTGTCTTTCTGCTACTCAACCAAGAAGCATATATGTCTTTTCTGTTTATCCATGTTTTGTTGTGTAAGTGTACAGTTGTT TATACCTTGACAGGAACAACGAAGATTAAGAATCTAGATCAAAATATCGGTGCCTTAGCAGTGAAACTATCGGAAGAGGA CCTGAGAGAGATTTCTGAGTCGGTTCCCGCTGATGATGTAGCGGGCGGGAGATACTACAATGGACTCGATCATTTTTCTT GGAAGCTTGCTAACACGCCTGCAAAAGATTCGAAGATCTCAACCTGAAGTACTCTGAATCCTTTTCAGTTAGAAATTGCT CTTAGTCATGATTTAAGGGCAGCAAGGTTGATAGAAGCAAATATCTGGAATCTATCTGAAACTAAACATCACAGTTTCAC CAAAGTCTGTGTTGTTAATTATGCTTTTCCCCATCGCTCACGGGGAGATTGAAGAATTGAAGAAGAAAATGTTGCATTAA TATTACTATTCACATAATGTTCCTCTGTATGCATGCTTATGTATTTGTGTATTTTCTACTAATAAATTTGCAGCTAGACA TTTCCCATTTTTAATGTGCTAATATCATGAACAAAAAAATTAACTGCCGGAAGGCTTACTCTAGAGTTATGAAACATTCT TATTGGTCAAAGCAAACACTATGCATGCATACAATTCCAAGAGCAAAGAAAATGACACCCCTTTCTGCATCTCTAAAGTG CTTAAATGTTGAGCTGCTAGTTGCTTAGTTAATACCTTCTAATCTTTTTTAAATAAAAAGAAGCATGAGGGAAGAGGAAA TTGGTGAGTTTCTTGAAGCCTTCTGTCTTTTTGACAGAGATGGCGATGGTAAGTACTGCTTACCCTTAATTATATATAAT CTCAATAGATCCTCATATAATGTTAATTTGTTCAATTCATTTGATGCTTTGCATCCTTTGTTCCTTAATTAATTTTACGC TTTTTTGTTCTGCCTTACTATAGAATTCGGTGACATTTATATTATTGTTGGAAAAAAGGGTTCATAACCATGGAAGAATT AGGCACTGCAATCAGAGCACTAGATTTTAATCCGAGGGTGGAAGAGTTGCAAATTATGATGAACGAAGTGGATACAGATG GGAACGGAACCATAGAATTTGAGGAATTCTTGAATCTCATGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAGGAACTA ATGGAATTTGTGTATCCACAAACAGTTCTTTACCCTCGAGGTCCATTTGAGTTAAGGGTCTATAATGTAAAGGAGAGAAG ATCTATTAAACATTTTCCTTCCAGTCCTTTCAAACATGAGTCACCTACGTTATGGATTCTACCACCATTCCATTGGGACT GATCAATGTAAGTTAGAGTATTCTGTTTTTTTATTTATTAATTTTTCACGTTTCATCATATTCATCTTAATATTGTCAAT GCCATTGATTGTACCCCTTTATGCTTGCTAAATGAATATTACTAGTGTTTTTTTACCCGCGCGTTACACGGAGAATATGT TTATGGTATTTGATACATCAATT
CDS sequence (LotjaGi1g1v0781100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGAAGAGCAAATTGGTGAGTTTCTTGAAGCCTTCTGTCTTTTTGACAAAGATGGAGATGGGTGCATAACCATGGA AGAATTAGGCACTGCAATCAGAGCACTAGATTTACATCCGACGGTGGAAGAGTTGCAAATTATGATGAATGAAGTCGATA CAGATGGGAACGGAACCATAGAATTCGAGGAATTCTTGAATCTCATGGCCAGAAAAATGAAGGAAAGTGAAGCAGAACAG GAACTGATGGAAGCTTTCAGGGTGTTTGACAAGGATCAAGATGGTTACATATCCCCCAGTGAGATGAGATCTGTATTGAG AACAGTAGGAGAGAAGGTGACAGATGAGGAGCTGGGGCAGATGATAAAAGTGGCTGATTTGGATGGTGATGGTCTTCTTG ATTATCAAGACTTCGTTAGGATGATGTTGGCTGCTTGA
Protein sequence (LotjaGi1g1v0781100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREEQIGEFLEAFCLFDKDGDGCITMEELGTAIRALDLHPTVEELQIMMNEVDTDGNGTIEFEEFLNLMARKMKESEAEQ ELMEAFRVFDKDQDGYISPSEMRSVLRTVGEKVTDEELGQMIKVADLDGDGLLDYQDFVRMMLAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 46 | 46 | 1.3E-14 | – | |
| PANTHER | 2 | 144 | 143 | 4.3E-75 | – | |
| PANTHER | 2 | 144 | 143 | 4.3E-75 | – | |
| SUPERFAMILY | 3 | 143 | 141 | 1.86E-50 | ||
| ProSiteProfiles | 4 | 39 | 36 | 14.764 | ||
| CDD | 8 | 70 | 63 | 2.107E-17 | ||
| SMART | 8 | 36 | 29 | 1.7E-6 | ||
| ProSitePatterns | 17 | 29 | 13 | - | ||
| Pfam | 21 | 71 | 51 | 6.0E-15 | – | |
| ProSiteProfiles | 40 | 75 | 36 | 14.486 | ||
| SMART | 44 | 72 | 29 | 8.0E-7 | ||
| Gene3D | 47 | 107 | 61 | 1.6E-26 | – | |
| ProSitePatterns | 53 | 65 | 13 | - | ||
| ProSiteProfiles | 77 | 112 | 36 | 16.689 | ||
| Pfam | 79 | 142 | 64 | 1.2E-16 | ||
| CDD | 81 | 142 | 62 | 1.26178E-18 | ||
| SMART | 81 | 109 | 29 | 3.3E-7 | ||
| ProSitePatterns | 90 | 102 | 13 | - | ||
| Gene3D | 108 | 142 | 35 | 1.5E-12 | – | |
| ProSiteProfiles | 113 | 145 | 33 | 12.728 | ||
| SMART | 117 | 145 | 29 | 6.3E-4 | ||
| ProSitePatterns | 126 | 138 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0781100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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