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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0781500 |
| Transcript ID | LotjaGi1g1v0781500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor family protein; TAIR: AT5G28770.2 bZIP transcription factor family protein; Swiss-Prot: sp|Q99090|CPRF2_PETCR Light-inducible protein CPRF2; TrEMBL-Plants: tr|I1JRM9|I1JRM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135455480..135459953) extracted from Lotus japonicus Gifu genome v1.2.
CCAAACTGGATGAGGCTACCACGTAATGCCATGTCACATTTTCATTTTAATATTCATTTTAAAAACGTGATTGATTGTTT TGTTACTCCTAGATTTGTGTGGTGATTGAAGACAATCAAGACATGATCCTAGTACAACACAACACAACGCGGTTTTGAAA TCTTTTCAAATCACCTTGTTGAAAATCACTATAACACAGTACAATATTTATTTGAGTGTCTTTGTTAGAAAGAACAGAGA AACAGGGTAGAAATGGAGAGGGTGTTTTCAGTGGAGGAGATAACGGAGGAGTATTGGTCGTCGGTGGGGAAGGATGAACC GGGGAAGATGAACCGGAGTACTTCAGAGTGGGCTTTTCAGCAGTTTCTGAAGGAGGCTTCTTCTTCTGTGGCGGCTGAAC AACCTTGTTCTTCTACTTCTCCTTCTTCCTCTTCCTCTTCTTCTATGGTTGACGTCAAACTCAAAAATGATCCTAGTGTT GTTGTTCCTGTTCCTATTGATTCTGAGGATTATCATGCTATTCTCAAGACCAAGCTCAATCTTGCTTGCGCCGCCGTTGC TATGACTCGGGTATGTATGCCTTGATTGATGATTTTTCTGTTTTTGAATTTTTTCTGTTCAAATTTCATCTTTGATATGT ATACTTTCTGGGGTTGGAGCAACTAAGTGTTTGCCAATTCTTATAGCCCACATGCTGTTTGTTATTATGCTTAGTCCAAA ATCAATAAGCATGATGATTTTTCTGTGTAATACGATCGGGTTGTTTCATTAGAATCAAAAGATGACTATGACATGATATA TTTACCTGTTCAGTGTTTACAGGGTTTTTTTTTGGCCTTAAAGAGTCAAATGACCATTTATAATTTGGTTGAAAAATGAA AAGATTGTTCTTTCAACCAATAGGTATGCAGGAAGCAGAACAATACTTCTGCTTTGAGGTCTACAATGGCAATGCATTGC AAAAAAAGATTTTTCTTGTTACTTTGATAAAGTTGGATTTAGTCAGTATTACTTTGATAATGTATATACTTTGTGTTAAT ACATTAGCCTCAGTGATCCGGAGTAACTTATGATCACTGAGATCTGTCTGGTGTAGCCTGAGATTAATTTTATGCTACTT AGAATGTTAACTGGTGAACCATTAACACTTTATGGCGAAAAGATTTAAGAAAAAAAACTTTTGATTGTCAAATCTATGAA GTTCCGACTCCAGACACAGACAATGAAGTGTTATACGCGGGAAGCACACACCAACAATGTGAATTTCTGGATTTCGTTAT TTCCCTTCCTCCATTTAAGATGCTATAGCCTATATGCAAATGCAAGTACTTCCATTTAAGGACTCGGTCACATTATTTTT CTTTGACTTTCTGCATTTGAATGCTCATATTCTTCAAAGTTGGATTTATTCATGATCTATAACTATTACCTGGTTTAATA TTAGGTTACAGTTCCCCCATTTCTGTCCTCTTTTCCAAGTGAGTTGAACAAGTATCTAACGTTTTCTTCTACTGATGACC ATAGGGATCTTTGGTCAAATCTCAGGATCTTGCCACTCTTCCTGAAAATGGATCACGGGCATCTAATCCTTCTGAAATTG TTGCTGGGGCTACTCTAAAAGGTTTGATTCCATATATAAATTTGGATGTGTTCATGAAGCCTGTGTATAATAAATTATTG GGTATTAGAAGCTGCATGAATAGGGTGAATGCAAAACCTAGGTCTACAATTTTTAATTTCTAATGCTTTAGAGGTTGAAT TTTTTTTTTCTCTCCTAACAGAAAAAAGTTATATCTGTATTTGTATTTTGTATGTAGAATCTGGCCCTTCTGGAAATGAT GCATCTAAATTACAAAATAAAGATGTGAATGTACCAATTGGGGTTCCTACCATGCAAATCAAACCTGCTGTTGCAATCAG GTCAACAACAAGTGGATCATCAAAAGAACTGTCAGATGATGATGATGCTGAGGGAGAGATTAACATGACCGGAAACATGA ACCCTGCTGATGCAAAAAGAGTAAGGAGGTAATGATAGTCACGGAATATTTTCAATGTGTTTGGCATAGAAAACATTAAT GATTCCCTAATCATATTAGATCTTTAACGTGAAACGGACGGATCCAGAAAATTTAAGTTGTGGGTCCACATATATACATA AGCATATAGTACTTTGACACCAAACAGGAACAGAAGATCTTAATCCACTCATATTCAAACTCATCAGTACTACTGTTGTG AAGAAAAGTTGCATAAGTATTATAGTTAACGTTCAAGCGATTACGATATGCCTCCTCACATTTTATCCAAAGATTTATTC TTTACATTCTTTTCTTTATTAGAAAACATTTATTTTATTGAATTCAGGTACAAACTGTGCCTTGTTTAATTTAGTGCCTT AGTACTTTATCTTTCAGGATGCTTTCTAATAGAGAGTCTGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTAACTGA GCTTGAGACACAGGTGTGCATAGTTCTTCTAGATCCAACTTCTTCTGCCCTCTCCTCTCTCTGCCTCCATGTTAGTTTTT CAAATAAGTATATGTTTTCTGACCTATATTCCATCTTAGGTCTCTGAGTTAAGAGGTGAGAATTCTTCATTGTTGAAGCG CTTAACTGACGTAAGTCAGAAATTCAGTAATGCTGCTGTTGACAACAGAGTACTAAAAGCTGATGTTGAAACATTAAGAG CAAAGGTAAATTACTTGCTGAGAGTATTTACCTATACCAGGCTTTTTCAGTGAAACCTGTTATAAGGAACCTACTGGCTC ATGCTAACTAGTTCCCAAGGATTGGTTATGGTGGCAGGGTGAGGATTGTGAATGTTAGAGATATAATATAAGAATCATTC ATGTGCTTTCACCCACCAACGTAAGCTTTGAAGTAATTGGTTTATGACATGCTGCTAAACCAGGATGTCGTCTTTTTTAA TATGGAGACAAACTAATAGTATGTTTCGATTAACTTATTTTTCCTCCGAATCAATTTTGACACCTGGAAGCTTTTGGCAC TTAGTAGCTACTCACATGAGCTTCTCTACAGAATCTATTCTGGCTTAAGAATCAATTGTAGAAGAATTTTCAAACATGCT ATTATTGAAAAGAAAGTAGCATTGATTCATGTGTATTGATTACTATCTCTCATGTTTGTCATTTCCCTCCATGCTGTTCT CTTTTTCAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAGTTACAGGCTTGAATCCAATATTCAATGGCATGGCTGAGAT ATCATCAATGGGAATGTCATTGTTTGATGAAAACCCTTCTGAGGCATCAGCTGATGCGTCTGTTCCTGTGCAAGAAGACC CAAATCATCATCTATGTCGACCCACTTCTAGTCATATTGCATCCAGTCATCTGAGAGTCAACAATAATGGATTAGGAGGC ATTTCTTCTGTTGAAAGTGTGCAACAGAACAGTGCAGCAACAGTGGTAAGTGGGAACAAAATGGGGAGAACAAGTTCCCT ACCAAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGCAGTGGTACGGATTCACGTGGACCTCTAAATAATGGAG AACAGTAATAGAATAGAATAGCTGAATCGAATTATGCCTTCACATGTCCGAAACCAGAACCAATTGTGAAAAGAAGTTTC TGTTAGTAGTATCTGGGTGTCAGAATTGATTCTAAGCAAAATACAAGCTGATTCAAACATGCTATAAATTATTTTACTAC TTGCAACTGAAGGTTTATTCTTGTTGACTATATTGTTAATCAATCTCATGTACATAATCTTGAGCAAGTTGACTGTTGTT GGTACTTGGTAGAGTTTGCTTTATCCAAATTGGATATTGTGTGCTTCATTTCCTAATGTTATTGTCATGCTTAGTGGCAG TATGCATATGGTTTATCATTTGGTGCTTTAAATGATGAGGACACTGGGTTGTTCTCTAAACTGCAATTAATAGAAGTAAC ACTCCTCAACAGCTCCAATGGAACTTGTCAGTTATACCACTGTCATCATTATTATACAGCCAATATCATCTTTATATCAT TAACTCAATGTGTCCAATACGCAACCATAATCTAGCATCTACATTTGAAAAATATTTTCTTTTCATTGGAAGGAAATTTG AAAGTCCACTAGTTAGATAGTGTTTGGAAACTCAATCAAAATTCACATTTAAGTCAAAATCATACTCTAGAATTCTCTAA ATTTTTTGTTAGTATAAAATTATTTCTACTCGTCTCGACACAAAACCATAATAAGTTACTTCTCCTACAACTATTATCAT TAGGGCATTAGTTTTAACACCCCCTCAATTAATCCCCCACCCTCCTTTATGAATCAAAATGTCTCATATACCCTTTAAAA TTTAATTTCATTCCAAACATATCCATTTGCCTACCTTATCACTACCATCATTTTTGTTTGTCACACCATGGGTG
CDS sequence (LotjaGi1g1v0781500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGGGTGTTTTCAGTGGAGGAGATAACGGAGGAGTATTGGTCGTCGGTGGGGAAGGATGAACCGGGGAAGATGAA CCGGAGTACTTCAGAGTGGGCTTTTCAGCAGTTTCTGAAGGAGGCTTCTTCTTCTGTGGCGGCTGAACAACCTTGTTCTT CTACTTCTCCTTCTTCCTCTTCCTCTTCTTCTATGGTTGACGTCAAACTCAAAAATGATCCTAGTGTTGTTGTTCCTGTT CCTATTGATTCTGAGGATTATCATGCTATTCTCAAGACCAAGCTCAATCTTGCTTGCGCCGCCGTTGCTATGACTCGGGG ATCTTTGGTCAAATCTCAGGATCTTGCCACTCTTCCTGAAAATGGATCACGGGCATCTAATCCTTCTGAAATTGTTGCTG GGGCTACTCTAAAAGAATCTGGCCCTTCTGGAAATGATGCATCTAAATTACAAAATAAAGATGTGAATGTACCAATTGGG GTTCCTACCATGCAAATCAAACCTGCTGTTGCAATCAGGTCAACAACAAGTGGATCATCAAAAGAACTGTCAGATGATGA TGATGCTGAGGGAGAGATTAACATGACCGGAAACATGAACCCTGCTGATGCAAAAAGAGTAAGGAGGATGCTTTCTAATA GAGAGTCTGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTAACTGAGCTTGAGACACAGGTCTCTGAGTTAAGAGGT GAGAATTCTTCATTGTTGAAGCGCTTAACTGACGTAAGTCAGAAATTCAGTAATGCTGCTGTTGACAACAGAGTACTAAA AGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAGTTACAGGCTTGAATCCAATAT TCAATGGCATGGCTGAGATATCATCAATGGGAATGTCATTGTTTGATGAAAACCCTTCTGAGGCATCAGCTGATGCGTCT GTTCCTGTGCAAGAAGACCCAAATCATCATCTATGTCGACCCACTTCTAGTCATATTGCATCCAGTCATCTGAGAGTCAA CAATAATGGATTAGGAGGCATTTCTTCTGTTGAAAGTGTGCAACAGAACAGTGCAGCAACAGTGGTAAGTGGGAACAAAA TGGGGAGAACAAGTTCCCTACCAAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGCAGTGGTACGGATTCACGT GGACCTCTAAATAATGGAGAACAGTAA
Protein sequence (LotjaGi1g1v0781500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERVFSVEEITEEYWSSVGKDEPGKMNRSTSEWAFQQFLKEASSSVAAEQPCSSTSPSSSSSSSMVDVKLKNDPSVVVPV PIDSEDYHAILKTKLNLACAAVAMTRGSLVKSQDLATLPENGSRASNPSEIVAGATLKESGPSGNDASKLQNKDVNVPIG VPTMQIKPAVAIRSTTSGSSKELSDDDDAEGEINMTGNMNPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRG ENSSLLKRLTDVSQKFSNAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPIFNGMAEISSMGMSLFDENPSEASADAS VPVQEDPNHHLCRPTSSHIASSHLRVNNNGLGGISSVESVQQNSAATVVSGNKMGRTSSLPRVASLEHLQKRIRSGTDSR GPLNNGEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 1.5E-166 | – | |
| PANTHER | 1 | 398 | 398 | 1.5E-166 | – | |
| MobiDBLite | 45 | 67 | 23 | - | – | |
| MobiDBLite | 173 | 202 | 30 | - | – | |
| SMART | 201 | 265 | 65 | 7.2E-20 | ||
| ProSiteProfiles | 203 | 255 | 53 | 11.634 | ||
| Pfam | 204 | 255 | 52 | 5.0E-14 | ||
| Gene3D | 205 | 258 | 54 | 1.7E-15 | – | |
| SUPERFAMILY | 205 | 255 | 51 | 6.05E-12 | – | |
| ProSitePatterns | 208 | 223 | 16 | - | ||
| Coils | 214 | 248 | 35 | - | – | |
| Coils | 263 | 283 | 21 | - | – | |
| Pfam | 272 | 396 | 125 | 9.6E-43 | ||
| MobiDBLite | 367 | 408 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0781500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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