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LotjaGi1g1v0785500.3

Overview

Field Value
Gene ID LotjaGi1g1v0785500
Transcript ID LotjaGi1g1v0785500.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha; TAIR: AT5G28850.2 Calcium-binding EF-hand family protein; Swiss-Prot: sp|Q5QIT3|2AB2B_ARATH Serine/threonine protein phosphatase 2A regulatory subunit B''beta; TrEMBL-Plants: tr|I1JRS9|I1JRS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:135801380..135809656) extracted from Lotus japonicus Gifu genome v1.2.

ATGACGATGGAGGTCGTTACCGATGCGGCGTCGTTGGAGGTCGAATTGTTGCAGCTACCGGAGGTTTCCTCCTTGGCTCT CAAGTCTAACCTCGCCTTCGTTGAGACGCTCTTCGACCAGTGGCTCTCGCTTCCTGAAAGCAATCGATTGGTACGCTTCA TTTCCATGTTCTTTATCATCAATTTTCCATAATCAACGTGTTGCTGCTACATTGCGAGATTTTGATTCCCTATTTGTTCA TAGAATAGTAATCATTTATATAATATTCGTCGAATCGAAAAATCCTCAAGGTTTGTGAGAAATATGCATCATTATTGGTA TCAGATTCCATTAACCTAGTTACCTGATGAGAATTGTAATTAATTCTGACTGTTATGGAAGGAAAATCAAACTCTTGGTG ATACTTGAAGTGTATCAATGAATATTGGTTATTAATGGAATGCTTTTTACATCCATTTATTGAGTTCCTTTACATCGTTG AGCTTTTCCTGTCTAGCACTACGGGGAATGTAAGTAATAATGCGTTCGTCGTTTGTGATTTTATTCACTTGCTAATTTGT GCAGGTAACGTCGTTGCTGAATGAAGCGAAGTCAGGTGCTCCGTTGAATGTCCCGGGGAATTGCTCTAGTCCAAATGCTA CGAGCAATTCTTTGCCTTCCATGTTTCCTGCGGGCACTGCGCCACCTCTTTCACCGAGGAGTTCGTCTGGTTCCCCTCGC ATAGTGAAACATAGAGTTGGTCCTTCTAATTTGGGTTCTCCGTTGAAGGTTGTGAGCGAGCCGGTTAAAGAAGTTATACC TCAGGTTAGGCACGTCTGGTGTTTTTTTAATATATTGGACAATAGTGAAAGACAATTGATAGAATTTAAGGGAGTTAAAC TACATGTATAAGGTGGATTCTGTATGCTCTTAAACTAAAATACCAAAACACATCAGACAAGATGAAATGATAAATAAATG CAGTTAAGCTGCCAAGTCTCTTTCCATATATGAACTGGAAACTTGCTTGAAACAACTATTATTTTAACATTTAAGAGAGG CCATACAAAGAATCCTCTCCTATACCAAGTCGAGGGGCAGAGAGATACCCATATTATGCCAGCATTCTGCTCTAACCTGA TGTACCAAAAGACCACATAGACTGCAAATTGCCAGAAAAACTTCTCCCTCTTTGTTTATGCTGACATCGATGCTGTTAGC CTATTACCAAGAAAGATACATTCCACACTCATCATAAAATCTGATGAACATGCAACAAATCATTTGTATTAATCCTATTA CGTACAGCTGTATAGTTTTCCTAACATCTTTATTTGGTGAGACCGTGAGACTCTTCTTTTGCACCTGGTCTACGAAGTGT GTGTGTTTCTTCATTTTCAGTTCTCCCCCTCCCTCACCTCCTTTTTATTCTTTGTCATGCTCATAAGAACTTTTGTGCTT GCAGTTCTACTTTCAAAATGGGCGTCCTCCACCAAATGAACTAAAAGACCAATGCTTGTTTAGAATTGACCATTTATTCC ATGATCACTTGGATGGGCTGCAGATACACGGTAAGATATTGCGCATTTGCGCATAAGTAGGTTATATCCTGAATGGCCAG CTGGCAACTGGGGAAAAGGAATTTCCAGCATATTCAAAGTTTTTAACCAATTATACCTCTTGTGATTTTGAATTTAACTT ATTATTTTAAATGTTTCCAAGAGTCAGATAGCGATATCTAAAACATACTCTGTAATGTAATAAAGAGTTGTAATAATAGC TCAATTTGGTTTTGTATGTTTCTTTCCTATGTCAGAATTCAAGTCAATTACTAAGGAAGTATGCAAGCTACCATCTTTTC TTTCCACTTCCCTTTTCAGAAAGATCGATAATGGAACCGGTATCGTGACAAGGTTTGTACTCTCATCTTTTAACATTATT TTTGTACTTTTTTTGTTCTATGGATGATGGTTTTTGAATTTAGATGTTTGAAGATTACCTTAGGCCTACCGCCTATGAGT TTCCCAAGTTCTTAAAATCTTAACATCACATATACCCTTATTCACAGACTACCCCTCTTATATGATGTCTTAATGTTTAG TTCCCTTTCCCAAATGATGAGTCTGTTAGAGATATAAACATTCCGTAGCTCCCTTTAGATTGAGTAATTCTTTGATGTAT TAGAGCCATCTTGACTAAGTAGTCCCATCACGAGTTCAATCTCAAATGTTTATAATGAATATGACTAAGTAGTGCTAGTG GTGTTCTATCATTGATTCACACATAGTAAGGATAGTGGCTGGCCCCAGAAGTGGTATAGCGGCATAGCGCAAAGCGAGAT GGCTGCTACACTGATTTTTTAATATTATTTTCTATAATTAATACTATATACATTGCAGAAAAAAACAAAGGAATAGATAA AAGAATAAAAACAGGGTAAGAGGAAAAGAAACAAACCAGAGTAATATAAAGGAGAAGGAAAAAAACAGAGAGGAATTGGG GGGGGGGGGGGGCAGAGAAACCCACCTGAAACAGTGGTCGCCAGAGAAATACTCCCTCCGGTCCTATTTATAAGCAGCAA AAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAATTTGTCTTGAATCAAAACAAACTTC CAAAATTACCCTTTGTTATTAGTGTTGGAAAGTGGGAAACAAAGAGAATAATTAATGAGACGCATTTTACAAGTTAGAAT TAATAAGGGCATCATTGGAAAAAATTAATTAATATAGCTCAAACTTTCATTTGGTTCTTATAAAAAGGACCAAGGTTTTT CTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGTACACAGTAAAGGCCGAAGTTTCGCAGGAGAAGGGGGTGGTAGA ACTAAGACTCATAGCAAAGCAGCTGAGAGAGAGCAGGGACGAATTGAGGCGCAGGAGAAGTTCTCAGTGTGTTTTTTGTC TTTGACCTAATTTCCCTCCCTTGAAATTCCAATCTTGCCCCTAAAAAGTCACCCACTGCTTTAAAACTGAGGGCTTTTCC GTCAAATCCCTCCCTCCTCACAGCCACACCTGCGATTTTCCGCTATTTGTCGCCGTTTCTCGCAACGAACGCCATTTGCG ATGAGATGACTCAGTCTGTAGCGGCAGCGACGCTCCGCTATGCCGCTATAACGCGCTATTGACTACTATGCCTTCACATT TTCAGCTCAAGGTTTTCCCCACGAGGCTACATGCTGTAATAATGACATATTTTCATCCATTTGCTTTATTGTATTTATAT ATAAATGCCACATGCAAATATCACAATCCATTTAGCTCTGCCTTCGTTGCCAAATTAGTTGGGATTTCAAATATCTCTTA AACTAGTTTTTAGGATTTTTAATCAGTTGCAAATTGCAATAGATCATTGCAAAGTTCAGAATTCGGCACTGATCTGGAAA GTAATAGTCTAAGGAGTGACTAGGAAAGTTGTTAGATCATAAAAGATCTGGTCTCATGATCAGATTAGTTGTCATGTGAT GATAAATGTACAGGCTTTGAAATTGATAGAAATTGCTTGAAGATGGACATAATTATCTTGAAGTTATATGGGTGTGTGTC TGTGTGACACTGGAAAACTTCACAGCTGGAATTCAATACTTAAGTTTTAGTGTTTGAGCATGTTAAGAACTGAATTTCCA GCATTTGTAAAAGTTGAGTTTGGAGCTTTGGAAAAGATCCTCCTTTGAATCATTTAATGAATGATATTGATTTAGTGCAT AACAGGACAGTAGGAGAATATTATCATTTTTAAAAAAATGATGGTGTGTTGAGGAGACTGTAGACAGTTATCATTTAGTC TATGAGCTAAATGTTTTCAGCCTCTTTTCCACTGAAAACCTTTCTTTTTCTTTGGTATTAGCAAATACTACTAAAATATC TGTAATGCGGTTGATTTACCTCTGTACTAAATTATTTTTTCTAACAAACCTTTACTAAAAATTGTGAAGCATGTCAGAAT AATTTACTTAGAGAGGACATTTAATTTTGTCAATTTTTCTGTTTAGTAATGAAGGTTATCAATTCGTCACGCTACGACAT ATAATACAATATTTGATGCTCTACTGCCCAAAAAGGGTGAAAGATGAGAAACCTAAGGCTTTGTTTGGTTGGGTGGAAAG AAAATGGAAGGAAGGAAAACACGGAAATCAATGAATGAATTTGGACTAGGAGCTAGTCCAAATTCATTCATTGATTTCCG TGTTTTCCTTCCTTCCATTTTCTTTCCACCCAACCAAACAAAGCATAAACATTTAAAAAAAGGAGCAAGTTGGTGGATAG AACAAATGCGCTGAAAAATGATGCTATACATGGTCTGGCTGAGAGGTTCTCAATGGGCCTGTTGTGGTGCATTGTGTTAA AGAATAAGTTATGCATGTAAATTTGCATTTCAATTCAATTGGGAACGATGCTGATTGATTTCTTGCTTGAAAGAAGTAAA CATCGATTATTTAATTCTTTCCTTACCATGCTATAGAAATTATAATTGAAGGGTCTTGATCCCTGTACTTGTTATTTCTT AATGCCTATGCATAAATCCTGATCTGTAATGCTCCTATAGGAAAGCATTTATTGATTATTGGATTAATGGCAACATGTTG ACAAAGGATATAGCAAACCAAATATTTACAATTTTAAAGCAACCACAGCTCAACTACCTTACCCAGGTATTTTTCTTCTA TTTCTTTTTTTCCTGGTTCATTTAATTTTATTCTCCTCATCTGATCATTACACTCAGTCATTGCCTGATGAAATCGATCA AATATGTCTATTCGATTTTCATTTCATACCGAAATGATTCATTTTCTTAGGGTTCAATTTTTTCTTCTTCTTGAATTTGG TATTATATTCCTGTCCGTCCTTTTTGAGAACTATATTGATGTCAGGATGATTTTAAACCTGTTCTACGTGAGCTTTTGAC AACTCATCCAGGGCTGGAGTTCCTGCAGAGCACACCTGAATTTCAAGAGAGATACGGTTTGTTTCCATCTTGGCTATTGG TTCATCTAATTTTGGATATCAGAAAAGAGTTTCAGATTCTTGCTACACTTATTTTCTCAAAGACACCATTTTTGGGGTTA TTCTTTATTCCAGCAGGCTTTTCCCAAATCTGCAGTCATAGGTTTATTACATTTAGTCTTGCCTTTGAAACTGATAAACG TTTTTTCTTATCCTGCGTTGACATTATTCAGCCTGTTGTGCATAACTGCTACTAGTTTGACTCAATTTTTTCAGTTCATA AAAAAATGTCAATGAATCAGTAGCCAATAGAAATTGTGATGAGTACAGAATATCCATTCATGATTTTTCATTGTCTATGT TTCTTTTTTTGTTTTTTTATAACTTCTTTCTTTATTTTTATTTGGGCTTTTCCTTCTAATTTCAATTAAAATGTAATAAT GCATATGATTATATATATCGAAGAGTCATTCTTCATTTATCTGAGATTGTGAAGAATCAGTTAAATGACGTTAATCTAAG TTGATTGTTGAAATCTGGGCATAGGCTGGTCATGGTTTCTGGAGTAATGCTGTTGTTTCATGGTACTTGTTTTTCCAATT TCCCAGCTGAAACTGTAATATATAGAATATATTACTACATTAATAGATCTGCAAATGGTCGTCTTACCCTGAGGGAGCTG AAGCGTGGAAATATAATTGATGCAATGCTGCATGCTGATGAAGAAGAAGACATCAACAAGGTTTTGAGGTAGATATATTG TGAAAATGTCATTACCATTAACTTCAAAAAATGATTTTGGTTTCTTATTCAAATGAATTAAATATATTTATATCAAAATG CAGTGATCTTTTATACCTTCCCTTAAATATTGTTTGCAGGTACTTCTCTTACGAGCACTTCTATGTTATATACTGCAAGT TTTGGGAGCTGGATACAGATCACGATTTCTTGATAGACAAAGAGAATCTTATCAGATATGGTAACCATGCGCTCACCTAT CGAATTGTCGATAGAATATTTTCTCAGGTTTGTGTGGATATAATATTATGTACTGCTTGTCTTGAGATTTGATAAATAGC GGTGTTCAGCCACGGACAATCCAAGCCTCCAACCCTGCCCCTTCTAATAGACATACAATGTCTGTACACTTTTTTTTTTC ATGACTTATCAGATTATTTGTTGAAGATACTGATTTTGACTCAGTTAAATATAATCACAGGTTGCAAGAAGGTTTACTAG TAAAGTTGAGGGAAAGATGGGTTATGAAGATTTTGTTTATTTCATACTGTCAGAAGAGGATAAATCATCTGAGCCGAGTC TTGAGTATTGGTAACTTTTTCTCATTCATTTTTCCGTTTCATTTGTTATCCTCTCACCCTTCTTGTTAAGATGTCACCGG ATTAGTTGATGTCTAAGATGCAAATATGATGATGATTCATTATGTTAACCACGTAGATATCATGTTTTCTTTTGTTAGAA TTTAGAAATATAATATAAAACCATTCATATGTTCTTCACTCAACAACTGTAGCTTTTGGGATAGTTTGTTCATGACATGG TATCATAGCCTCTTTGATAAGTAGTCTAGAGTTTGATCCTTGTTGCCTCCATTATTCTAATAAAAAGTTGAATTTCAGCC CATGGCACGCAGCCCGCTGCATTCTCCACGCTTCAAGCCTAATGGGCTCTTGTGTGAGGGGGCGTGTTAGAAATATAATA TAAAACCATTACCCAATAACTTAAGCTTTTGGGATAATTGGTTCATGACATATTTGATTTGGATTTTGGACTTCACATAT GCATACTCAAGTCTCAAAGGCATGGTGCTGAAACTTCACCTATTCAAAACTGACCAGAGTTTCAATTTTTTGAAATAACA ATTTTCATGTATGATGTACTAAAATTGTTGTTTTTATAACAGTTTTTGAAAGAGACAAAAGTAGGTAACAACAATTTGCA TATTATTTTCAGTTTTACCATTGATGAGAAAGTTTTTCATGAATTGTTTCCCCTGTTTTCTGTGACTTCAAAGTACAAAA TCAAGAAAACATCAAAATAGAAAAACTGTTTTTATATTAGCACGGTATAAACAATCCAACGGAAGAGTTTTATTTTTTCA AATAACTGTTTTTCAAATAGTTCCAAACACATCCAAAGTCTTTCCTTTCAAGGACGGTGATATTGCAAGCTTTGTGTCAT AGGGTATTATACTCAATAGCAGTGTCAAGAAAAGGCACAGCTGAGAAATAGGACATGAATGATGGATTGAATTTTAACTT TGGGCTGGTTGGTACCTGGAATGATTGTAGGGAAATTGCACAATTTATTTTTTTGTTTTTGATTTTTTTTTAAAAGCTTT CTACCTTTTTCCACTGCCCTTTATTTTTCACCCTGCCCACAAAGCTCACCCTTAGGCCAGCATTTATAAATTGACCTTTG TGGTTGACTCTTCTTAGCTATGTCTGACTTTGACTCACTTTAACTTGTCATGGTCAGGTTCAAGTGCATTGATTTGGATG GAAATGGAGTTTTGACACGAAATGAACTGCAATTTTTTTATGAGGAGCAATTGCATCGAATGGAGTGCATGGCTCAAGAA CCTGTGCTTTTTGAGGATATATTGTGCCAGATTATTGACATGATTGGACCTGAGGTTTGTCTTTCAATCTTTCTTCAATT GATTGTTTAATCATATTTCATTGTGTTGTCAGGGAGTCACAATAGCTGAAAATTGATGCAATCTAGTGAGCAGTTTATAA AATTGTGTTTTGTCCTGGAGAAATGACAATCCAAGTTGCACTTTTTGGTTCCTCCTTTATAGTCTTTCATTATCTTTTGG CTGATATCTTGTTGTAACTTATCCTTTCGATGACATTTTTTTCCTTAATTCTAAATTAAAATTCTTCACTACGCAGGACG AGAGCTATGTAACTCTGCGTGACCTGAAAGGTGGAAGACTGTCTGGAAGTGTTTTCAATATCCTGTTCAATCTAAATAAG TTCATGGCCTTTGAAACTCGTGACCCATTTTTTATTCGACAGGTGCATGAATATGTGATAAAAGTGTGCTTTTGATTTGT ATTATTGGCTATTGTCGATGAGTCTAACCTCCTTGGTGTATGTTTTGTGTGAACAGGAGCGTGAAAATCCTACATTGACA GAATGGGATCGCTTTGCTCATAGAGAATATATTAGGCTTTCAATGGAGGAAGATGTAGAGGACGCCTCTAATGGAAGTGC AGAAGTCTGGGATGAATCACTAGAGGCTCCCTTCTGA 

CDS sequence (LotjaGi1g1v0785500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACGATGGAGGTCGTTACCGATGCGGCGTCGTTGGAGGTCGAATTGTTGCAGCTACCGGAGGTTTCCTCCTTGGCTCT CAAGTCTAACCTCGCCTTCGTTGAGACGCTCTTCGACCAGTGGCTCTCGCTTCCTGAAAGCAATCGATTGGTAACGTCGT TGCTGAATGAAGCGAAGTCAGGTGCTCCGTTGAATGTCCCGGGGAATTGCTCTAGTCCAAATGCTACGAGCAATTCTTTG CCTTCCATGTTTCCTGCGGGCACTGCGCCACCTCTTTCACCGAGGAGTTCGTCTGGTTCCCCTCGCATAGTGAAACATAG AGTTGGTCCTTCTAATTTGGGTTCTCCGTTGAAGGTTGTGAGCGAGCCGGTTAAAGAAGTTATACCTCAGTTCTACTTTC AAAATGGGCGTCCTCCACCAAATGAACTAAAAGACCAATGCTTGTTTAGAATTGACCATTTATTCCATGATCACTTGGAT GGGCTGCAGATACACGAATTCAAGTCAATTACTAAGGAAGTATGCAAGCTACCATCTTTTCTTTCCACTTCCCTTTTCAG AAAGATCGATAATGGAACCGGTATCGTGACAAGGAAAGCATTTATTGATTATTGGATTAATGGCAACATGTTGACAAAGG ATATAGCAAACCAAATATTTACAATTTTAAAGCAACCACAGCTCAACTACCTTACCCAGGATGATTTTAAACCTGTTCTA CGTGAGCTTTTGACAACTCATCCAGGGCTGGAGTTCCTGCAGAGCACACCTGAATTTCAAGAGAGATACGCTGAAACTGT AATATATAGAATATATTACTACATTAATAGATCTGCAAATGGTCGTCTTACCCTGAGGGAGCTGAAGCGTGGAAATATAA TTGATGCAATGCTGCATGCTGATGAAGAAGAAGACATCAACAAGGTTTTGAGGTACTTCTCTTACGAGCACTTCTATGTT ATATACTGCAAGTTTTGGGAGCTGGATACAGATCACGATTTCTTGATAGACAAAGAGAATCTTATCAGATATGGTAACCA TGCGCTCACCTATCGAATTGTCGATAGAATATTTTCTCAGGTTGCAAGAAGGTTTACTAGTAAAGTTGAGGGAAAGATGG GTTATGAAGATTTTGTTTATTTCATACTGTCAGAAGAGGATAAATCATCTGAGCCGAGTCTTGAGTATTGGTTCAAGTGC ATTGATTTGGATGGAAATGGAGTTTTGACACGAAATGAACTGCAATTTTTTTATGAGGAGCAATTGCATCGAATGGAGTG CATGGCTCAAGAACCTGTGCTTTTTGAGGATATATTGTGCCAGATTATTGACATGATTGGACCTGAGGACGAGAGCTATG TAACTCTGCGTGACCTGAAAGGTGGAAGACTGTCTGGAAGTGTTTTCAATATCCTGTTCAATCTAAATAAGTTCATGGCC TTTGAAACTCGTGACCCATTTTTTATTCGACAGGAGCGTGAAAATCCTACATTGACAGAATGGGATCGCTTTGCTCATAG AGAATATATTAGGCTTTCAATGGAGGAAGATGTAGAGGACGCCTCTAATGGAAGTGCAGAAGTCTGGGATGAATCACTAG AGGCTCCCTTCTGA 

Protein sequence (LotjaGi1g1v0785500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTMEVVTDAASLEVELLQLPEVSSLALKSNLAFVETLFDQWLSLPESNRLVTSLLNEAKSGAPLNVPGNCSSPNATSNSL PSMFPAGTAPPLSPRSSSGSPRIVKHRVGPSNLGSPLKVVSEPVKEVIPQFYFQNGRPPPNELKDQCLFRIDHLFHDHLD GLQIHEFKSITKEVCKLPSFLSTSLFRKIDNGTGIVTRKAFIDYWINGNMLTKDIANQIFTILKQPQLNYLTQDDFKPVL RELLTTHPGLEFLQSTPEFQERYAETVIYRIYYYINRSANGRLTLRELKRGNIIDAMLHADEEEDINKVLRYFSYEHFYV IYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVARRFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKC IDLDGNGVLTRNELQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPEDESYVTLRDLKGGRLSGSVFNILFNLNKFMA FETRDPFFIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 537 537 0.0
PANTHER 1 537 537 0.0
MobiDBLite 62 84 23 -
MobiDBLite 62 104 43 -
Gene3D 124 224 101 4.1E-10
SUPERFAMILY 137 290 154 1.67E-12
Pfam 214 303 90 7.5E-35
Gene3D 225 312 88 1.8E-33
SUPERFAMILY 302 460 159 2.52E-24
Gene3D 313 484 172 2.1E-63
Pfam 318 418 101 6.0E-19
ProSiteProfiles 389 424 36 10.943
ProSitePatterns 402 414 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0785500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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