Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0786700 |
| Transcript ID | LotjaGi1g1v0786700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT5G18460.1 carboxyl-terminal peptidase (DUF239); Swiss-Prot: sp|Q96GX5|GWL_HUMAN Serine/threonine-protein kinase greatwall; TrEMBL-Plants: tr|I1NCE9|I1NCE9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0786700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135892534..135896959) extracted from Lotus japonicus Gifu genome v1.2.
ACAGAAGATGCCAACGGAGATGCCAAGGGGGATGAATATTAATGTGAATGGGATGAAGGATAGTGTGAGTGGCGGCGCGT GGCAAACATGGCACCAAAATGGGACACGTTGTCCTAAGGGAACTGTTCCGGTGCGGCGGAGCACAGTGCATGATGTGCTG AGAGCAAAGTCTTTGTATAAGTTTGGGAAGAAACAGCGACGGTTATCACCTCTCTCCCGCCGCGTCGACGCTCCCGATGT TGTCAGTGGCAATGGCCATGAGGTGAGTGCGTGGATTCCTGTCCCTTTCAGTCGCCACCATCATTTTCATTGTTTTAGAA GTCACTCTTTTCAACTCTACCATCATTGTCTTTAATTTGCTTAAAGCTTTTTCAAAAGGAACATTTCCATCTATGGTCTC TACTCAATTAGCTTATGAGTGTCACTGTCCATATCACATTTATCTAACAACTAGATGATTCTTAATATGTAGATATCAAA TTTAGTTTAAGAATCAAATCTATGGTCTATGATCTATGATCCTTAATCTGCCTCAATATTTGTGTCATGGATTATAATGT GAATATAATTTATGTAGACATGAACTAAACAGCCAATGAATATAATAGCACAAGAAAATGCACACTTAAAACCACAAGTC TCAGTACAATTAGTAGATAGTCGAGTTCTTTAAACATTTAGTTAATGATTAGAGCCCTAAGGTGATTGTGGAGATATCTT GGTAAAAAAAAGAATGTACACTTAAATTACTAATGCATGTATTTCAATGCACAAACATGCATTTTGTGAATTTTAGTTGC ACTTGCAAGTAGCTGATAAATATAACTAAGTATATTGTAAATCTGAAAGGAGACATAACAAGATTGTAGTTTCTCCTTGT AATACGGTGATTTTACTCAATATTTACTTGAATTTTTACATTTATTTCCAATGTCCAGCAACTAACATGCATGAATTTAA GAGCTGACAGTGCAATTGTTACCATTCATGTAATGATTTTGACCAGGATCCGGGTCCCGCTAACAATTTACACTCTTCTC GTTTAATAATGATGCAAAGATTCGTTTTTCAATTTTTTTTATTTTCTAAGTACTGTAGTAAATAAATATTGAGTGCTGGG GCTTCCGAATATATTAATTACAACATAAATATATGAGATCACCCCATCTACCTCCCTTGGCTACACTCTTCTTCTTTGAC ATTTTTTTATGTTATCTTTTTTACATAGCAATCAATTGCAATAGTCAATTTGTAGTAATAATAATCTATTTTGTGTAGTA TTTTTAATTGATTAAGATAAGGTAACTTAATTTTGTGTATGTGTGTAGCATGCAATTGCGTACACAGGATCACCAGAAGA AGTGTATGGGGCAAAGGCGACAATAAACGTGTGGGATCCATCAATCGAAGTGGTCAACGAGTTCAGCCTCTCACAAATTT GGATTCTTTCTGGATCCTTTGATGGCTCTGATCTCAATAGCATTGAAGCTGGATGGCAGGTATATATAATATATTCCTAA CTTCATATATTCTTCCATTTTCTTATTCAATTGGCAATTTGTAATTAATATATTTTGGTCGATTGCTTTAAGCAACCCAA CATTGATGAATTGAGGAGATTGTATTATTACAACATTTCGTACAATGCATTCAATGTGGAGTTATAAAGAAACTATATAG TAACTTTATGAATTTTTGGTCAAATGATCAATTAAATAGTCTCTGAAGCTTTGATTATTCTACTAGTCAGGTCAGTCCGG AGCTTTATGGTGACAGCAAGCCCAGATTATTCACTTATTGGACGGTCAGCATTCATTCATATTTCTAAATTTTATCACTT GATCGGTTAAATTGGGAACTCGTCAAGTGATCGGTTCATTTGAATGAAATGGTTTAATTGTGGGTGATATTGCAGAGTGA CTCATATCAAGCAACAGGATGCTACAACCTTCTCTGTGCTGGTTTTGTGCAAACAAATAACAGGATAGCAATTGGAGCTG CCATTTCTCCTATCTCTTCTTATGATGCCAGCCAATTCGACATTACCATCCTCATTTGGAAGGTTAACAATTTCATTTCT TCATCATATGTACAATTTACTACATAAATATATATAATTTGAAGTTGTTTAACTTACCTCAAGTGATTGAACATATATTA TTATCTAGGACCCCAAGATAGGGAATTGGTGGATGAGTTTTGGTGACGGCGCATTGGTAGGGTATTGGCCGACAGAGTTG TTCACACACTTAGCCACCCACGCCACCATGGTGGAGTGGGGTGGCGAGGTAGTGAACACGCATGTCACCGGCCAACACAC CTCCACCCAAATGGGCTCAGGCCACTTCGCCGATGATGGCTTTGGAAAAGCAAGTTACTTCCGGAACCTTGAGATCGTAG ACACAGATAATAGTCTCAGCTCTGTGAACAACATCTTAACCTTAGCTGAGAACACAAACTGTTACAACATCAAAAGCTCC AGCAACAACAAATGGGGCACGTATTTCTACTATGGTGGTCCTGGCAACAATCCTCAATGCCCATGATGATGATTTAGTCA TATTCCAGCGTTTATATATATAGTATAATTTCGAATTAGTGTCTTGTTGCATTCTTTGCTTAATTGTACGTAAATATAGA ATTATTATTGGGCCATTTCCATTCTTGTTTCTGCCACTTCCACTATTTTGTTTGTTTCCTCTGGGAAGAAGGAAAATTTG TTGTAGTACTATAAGCAACTAAGAAATCTGTCTATTTGTGTGAATGCACAAACAAGACTGGAAATGGAGAAGTATTACTT TGAAATTTGAAATGTCATGCTTAATATTTCTGATATATTATTGTGTTAAAGTAGGTAGTGAATGCGTGAAGATAATTTCT TTTACACATCTCTATAACATACAGAAAGACGATAAATTCAATACCTGCAAAAGCTCCTACATCCCTTTCTCCGCTTATAA ACCAAACAAAGTTGAGTGGTAACAACTTCAAATTCCTTCAAAATAGAAGTTCATTTGGTTGCAACCGAAGCAAATTCACA TGCCATAAATTGTTTTTTCACAGTAACAGAAAGTATCATTGATGTAGAAAGACATGATAGTTACTAACAACCGTTAAACT GCACCCTAGAATTTACTTACCAGCACATAAACTGATATTCTTCATATGTTACCATGAATAAGACTGACAATGTTCAACAG TTCATAGTAAAGAAAACTAACAGAAGACCAGCCATAATACATTACTAATAACATGACTAATTGCGAAATGACGCTGACAT CTGATCAATCCATCATCCTTCTTATATCTCTTTAAGTACTACACGTTAACTTCCCCCAAGCAGTCCTAGCCTTTGAATTG ATAATATACAAAATGGCATTGTAGCATAAACAAGGATTCATTTCATATTTCTTAATGTTAATTCACTTATCCCATTCCAA GTCGAAAACTGGTTTGTCCACCTTCGACTGAAGGCCAACTGTCCCTCCGGGCAGACTGGACTGCTGATTAGTTAAACGGT CCCAGCCCATGATGTGTGGCAATGCAAACTGCATCAAAAAGCAAATTGACAAATGCCAAAACTCTTAACAAGGAGCAAAA ATATACTAAAAGCATGCAAAACAAAAACAGAAGATTTGGCTATGCATGGTTGTATCGAAAGCAACTTATAAAAACCAGCA GTGCTAGGAACTGGATTCTAAACCAACAAATAAAGAAACTTTACATGAATGGTTCAAGCTTCCCACACATTAAAACTTAA CAGCTATTTTGAGCATAGAATCAAAAAGGAAAAAATGGACTGGCTAGTTTGATTGTAAAACCAGACAACTAGACAGGTGG TCAGCAGCTCACAAAACTGGGTAAGCAAGCAACCAGAAGATAACAGTCCAAATCAGTGCCAAACCAGGGGTGAACCAGTT TGAGCCTTTTATAAAGCAATTACTTTAATCAAAGTAATATTTCCAGCCATTTGCAGGGCCCCCACATATGAAGCTTATAA GCAAGACATGAATTGACTTGCCCTCTCTTAACTTTTATATATGTTGTACATCTGGATGTTTCACCCACTGTCCAAAGAAG GACTATGAAGCATTAGGCAGCATAATGGTTATCCTCTCTTTGCTTGACTCCATGCGATATTCATAGGATGATTATCAGCT AGCCTCTTACTATTGGTATTTTATCTTTTACAACATGTCAAGTGAGAGGGCTACTGCCACATGTGGTGGTCCAGTCCAAG GGAAAGAGACTCTTTAAGCATGTGGTCTAGGGTTTGATCATTGAATTTGTGTGTATGGAAAAACATTGTTGGGAGGGGTC TCTGTTATGGAACCCGATCCTACCCTTGGAGATTAGTCTCTTTTATATGAGAGTGAGACAAGTAAACCTTGACCGTCAGA TCTTATCATAAATTTTCAACATGAAG
CDS sequence (LotjaGi1g1v0786700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTTTGGTGACGGCGCATTGGTAGGGTATTGGCCGACAGAGTTGTTCACACACTTAGCCACCCACGCCACCATGGT GGAGTGGGGTGGCGAGGTAGTGAACACGCATGTCACCGGCCAACACACCTCCACCCAAATGGGCTCAGGCCACTTCGCCG ATGATGGCTTTGGAAAAGCAAGTTACTTCCGGAACCTTGAGATCGTAGACACAGATAATAGTCTCAGCTCTGTGAACAAC ATCTTAACCTTAGCTGAGAACACAAACTGTTACAACATCAAAAGCTCCAGCAACAACAAATGGGGCACGTATTTCTACTA TGGTGGTCCTGGCAACAATCCTCAATGCCCATGA
Protein sequence (LotjaGi1g1v0786700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFGDGALVGYWPTELFTHLATHATMVEWGGEVVNTHVTGQHTSTQMGSGHFADDGFGKASYFRNLEIVDTDNSLSSVNN ILTLAENTNCYNIKSSSNNKWGTYFYYGGPGNNPQCP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 117 | 117 | 1.6E-73 | – | |
| PANTHER | 1 | 117 | 117 | 1.6E-73 | – | |
| Pfam | 3 | 110 | 108 | 6.7E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0786700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…