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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0787100 |
| Transcript ID | LotjaGi1g1v0787100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase family; TAIR: AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q8LB81|GDL79_ARATH GDSL esterase/lipase At5g33370; TrEMBL-Plants: tr|I1NCF4|I1NCF4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135985066..135987652) extracted from Lotus japonicus Gifu genome v1.2.
TCAATGACATTGCCATTTCCCTCAAGTTTTGTTCCCTTGGTGATTATACTTTTAGTAGTAGTAGGGGTCATTTTCCCAGG AGCTGAGGCCAAGTCCAAGTCGTCCAAGCCTAAGCCCAAGCCCAGCAGGGCTTTCTTTGTGTTTGGAGACTCACTTGTTG ACAGTGGCAACAACAATTACTTGGCCACCACTGCAAGGGCTGATTCCCCTCCTTATGGAATTGACTACCCAACTCGCAGG CCCACGGGTCGTTTCTCCAATGGCCTCAACATTCCTGATCTTATTAGTTAAGTATCATTCTCCATCAACTAACTATTTAT GATTTTTTTTTATCAAGTGAATTGGTTAAATTGGTTCTGAAAGTGATTGACACGGCAAGTTCATCTATGGACTTAGGAAA TACAACACATGGCCCCTGATTGTGGTCAGATAAAACATCGATTAAGTTAGTCCCCACATTTTATACAATTAGGGACCCCA AATATAGTAATTATTTCTTCAAGTGACGAACTTACCGACATCCAACACTTTCATGAATCAATTTAGCTATTCACTCTTTT TTTTATCACTTGTTTGAGATTAGTTTCATTCTCAAGCTTCACTTCCATATCATCCAATAGGGACATACTTTTGGATGATA ATATAGACATTTGGATGTCATAGAAGAGAATTGATTTCAACTCAAAATAATTTTTGTGTAGAAGTTAAGTAGAATAGGTT TTGAGTTGAACATATATAGTCAATCTTAATTTCACTACATTACCTTGAAAAATATTTTTTTTCTTAAAAGTATTCAAACA TAAATCACTTCACTTTAAGTTTATCTCAGTTCAACTCACCTTTACCACAATCAATTTTACCAAAATCAACTTTATTTAAA ATCAATTGTGACAACACTGATCGAAACAAACACTTAGTGCATGTCTTGAAATTCTTCTATAATTGTTTATAAAGTCAGAA TCAATTATTAAAAGAAGCTTTGTGTTTCATAATTGATTCTAAGAAAAAAAAACACATGCAATTGTACATGTAGACATGAC ATTTGTGTATTGCATCTAATTATTGTTAACTAGCTGCTTTGATTATTATCAGGCCAACAACTAGGTGCTGAGTCTGTCCT GCCATACTTGAGTCCACAACTGAGAGGTAACAAGCTTCTACTTGGAGCCAATTTTGCTTCAGCTGGAATTGGCATTCTTA ACGACACCGGAACTCAGTTTGTAAGTACAATAAAATGCATACCACCATATATGATCCACACTGCAAGCTAGTATAATGCA TATATAATCACCTTTTTTTGTTTGTTTAATTAATTTTCTTCATTTAAAATATGCTGGTTAATTAGCAATTGTGGCTTAAT AATTTGCAGCTAAATATAATCAGAATGTATAGACAATTGGACTATTTTGAAGAGTATCAGCATCGACTGGCCTCTCAAAT TGGAGTAACAAAGACCAAGGCACTGGTGGATAAAGCATTGGTCCTTATCACTGTTGGTGGAAACGATTTTGTTAACAACT ACTACTTGGTGCCTTATTCTGCAAGGTCTCGCCAGTATTCACTACCAGATTATGTTAAATTTCTCATTATAGAGTTCCGT AAACTCTTGCAGGTAATTATCAAGTCTTATTACATAACCTTTTTGAGCACAAAGAATAATAATATATAGTAACTTTTCTA GCTGAATGAACTTCACTTATGTGGTCTTGCTTCTTTGTGTGACCATTTAATGCAGAGATTATATGATTTAGGAGCTCGCA GAGTTATTGTGACTGGCACTGGACCATTGGGTTGTGTTCCTGCAGAATTGGCAATGAGAGGAACAAATGGAGGATGTTCT GCTGAACTTCAACGAGCTGCAGCATTGTACAACCCTCAACTACTGCACATGATACAAGCTCTAAACAAGAAATTTGGCAG AGAGGTTTTTGTTGCAGCAAACACAGGACAAATGCATAACGATTTCATCACTAACCCCAAAGCATATGGTAGTACTCTAA CTTCTATATATACCAACTTCTTAGTGTATAGTCATTTTGGCCTTTAAAGATATGAGTTCCGTCAACGTAATTCTTGAAAG ATTGAAAAAAGAAGAATAGTTACGAAAAGACTGACCATTTAATCATTGAAAGATGAAAATCACAATCTAAAAAATGACGG TTCATTTTAGTCTCTGAAAGACTAAATTGAAATTTAGTTTCATCTTTCAATGACTATTTTATCTATTTCTTTAGCAGAGG GCAAAGGTGACCGAACTGATATATTTCTAGGACTAAATGACTACAATTCTAAGCAAACAATTTAAAGCACCAACTAACAA GTATATAAATATGTGATTGTTTGTTGGGCAGGATTTACTACATCAGAAATTGCTTGTTGTGGGCAAGGACCCTACAATGG GATTGGGCTGTGCACACCACTCTCTAACTTATGCCCACACAGAAATTTGTATGCATTTTGGGATCCATTCCATCCATCTG AAAAGGCAAACAAACTTATTGTGGAGGCAATTATGTCAGGTTCTAAAATGTACATGAACCCGATGAACCTCAGCACCATC CTAGCATTGGATGCTCCCTCCACATGA
CDS sequence (LotjaGi1g1v0787100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATTGCCATTTCCCTCAAGTTTTGTTCCCTTGGTGATTATACTTTTAGTAGTAGTAGGGGTCATTTTCCCAGGAGC TGAGGCCAAGTCCAAGTCGTCCAAGCCTAAGCCCAAGCCCAGCAGGGCTTTCTTTGTGTTTGGAGACTCACTTGTTGACA GTGGCAACAACAATTACTTGGCCACCACTGCAAGGGCTGATTCCCCTCCTTATGGAATTGACTACCCAACTCGCAGGCCC ACGGGTCGTTTCTCCAATGGCCTCAACATTCCTGATCTTATTAGCCAACAACTAGGTGCTGAGTCTGTCCTGCCATACTT GAGTCCACAACTGAGAGGTAACAAGCTTCTACTTGGAGCCAATTTTGCTTCAGCTGGAATTGGCATTCTTAACGACACCG GAACTCAGTTTCTAAATATAATCAGAATGTATAGACAATTGGACTATTTTGAAGAGTATCAGCATCGACTGGCCTCTCAA ATTGGAGTAACAAAGACCAAGGCACTGGTGGATAAAGCATTGGTCCTTATCACTGTTGGTGGAAACGATTTTGTTAACAA CTACTACTTGGTGCCTTATTCTGCAAGGTCTCGCCAGTATTCACTACCAGATTATGTTAAATTTCTCATTATAGAGTTCC GTAAACTCTTGCAGAGATTATATGATTTAGGAGCTCGCAGAGTTATTGTGACTGGCACTGGACCATTGGGTTGTGTTCCT GCAGAATTGGCAATGAGAGGAACAAATGGAGGATGTTCTGCTGAACTTCAACGAGCTGCAGCATTGTACAACCCTCAACT ACTGCACATGATACAAGCTCTAAACAAGAAATTTGGCAGAGAGGTTTTTGTTGCAGCAAACACAGGACAAATGCATAACG ATTTCATCACTAACCCCAAAGCATATGGATTTACTACATCAGAAATTGCTTGTTGTGGGCAAGGACCCTACAATGGGATT GGGCTGTGCACACCACTCTCTAACTTATGCCCACACAGAAATTTGTATGCATTTTGGGATCCATTCCATCCATCTGAAAA GGCAAACAAACTTATTGTGGAGGCAATTATGTCAGGTTCTAAAATGTACATGAACCCGATGAACCTCAGCACCATCCTAG CATTGGATGCTCCCTCCACATGA
Protein sequence (LotjaGi1g1v0787100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLPFPSSFVPLVIILLVVVGVIFPGAEAKSKSSKPKPKPSRAFFVFGDSLVDSGNNNYLATTARADSPPYGIDYPTRRP TGRFSNGLNIPDLISQQLGAESVLPYLSPQLRGNKLLLGANFASAGIGILNDTGTQFLNIIRMYRQLDYFEEYQHRLASQ IGVTKTKALVDKALVLITVGGNDFVNNYYLVPYSARSRQYSLPDYVKFLIIEFRKLLQRLYDLGARRVIVTGTGPLGCVP AELAMRGTNGGCSAELQRAAALYNPQLLHMIQALNKKFGREVFVAANTGQMHNDFITNPKAYGFTTSEIACCGQGPYNGI GLCTPLSNLCPHRNLYAFWDPFHPSEKANKLIVEAIMSGSKMYMNPMNLSTILALDAPST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 12 | 24 | 13 | - | – | |
| Phobius | 25 | 29 | 5 | - | – | |
| Gene3D | 29 | 361 | 333 | 3.3E-43 | ||
| Phobius | 30 | 380 | 351 | - | – | |
| PANTHER | 39 | 376 | 338 | 4.6E-213 | – | |
| PANTHER | 39 | 376 | 338 | 4.6E-213 | – | |
| SUPERFAMILY | 43 | 357 | 315 | 8.79E-8 | – | |
| CDD | 43 | 360 | 318 | 1.07408E-127 | ||
| Pfam | 45 | 356 | 312 | 1.7E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi1g1v0787100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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