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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0789000 |
| Transcript ID | LotjaGi1g1v0789000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Intracellular protein transporter USO1-like protein, putative; TAIR: AT5G41620.1 intracellular protein transporter USO1-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|A0A151UD83|A0A151UD83_CAJCA Uncharacterized protein At5g41620; Found in the gene: LotjaGi1g1v0789000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136136549..136140418) extracted from Lotus japonicus Gifu genome v1.2.
GGAATTATTTAGGAGGAGAGAAGACCAAAGGACGACAAAATTAAGGTGCAGGGGTCCAATAGAAGCGGATCCCACTTTGA AACATGTGCTTACCTGGCAGAATCTTTGGGGGAGAAGAAGAAAGGTGACTGTATAACTTGTGACTTGTACACTCAAGTTT ACTTAACTTGTTCATGGAGCTTTCTAGGTGAGTCAAAAAAGGAGGAGAAAACACTTCATTTTCAATCATTTTCTATTGAA GAAATGAAGTTCAAAATTTGAACTTGGAGTAGAGAGAGGCATAGGAATTGAGGAAGATGGAAAGAAGAGAAAAGGGTGTG GAGAGAGATAAGAAAAGTGAAGGACTAATGGTGGAAAAGTTGAAAATTGGATGTGTTGTGGGGAAAAGAAGAGACCCTTC AACTCCACCACCCACTTGGAGACTTGAGTTTCCATCTCATAGTAGCACCAAAAACCAGGTTCAAGAGTTCCTCAACTTTC CCACTTCAGCACTCTCTGCCAGAAACCTCTGTGCCAAACTCTGGGAAATTCAGCCCCACCAATTGGCCCCTCTTGCCAAA ATGAGAACCAGCCTTCGCCGCCGCCACGCCCACCATTGTAGGGACACAATTTATGAGGTTGAGCCTCCTCATACCCCATC TGAACAGCTCTAATATCAGCTTTTCCTTTTTTTTCTTTTGAATTCTTGTTTTTTGTATATGATTTAGTTATGCACTTGTT TCTCTACTTGTCTTCTGCTCTGATTGGCTTTTGTTTCACTACCTTTTTATAGTGTGTTTGGTTCTGTATACAAGCCTCAT AATCACTTTTAAAGAGAAGTGACAAAGTGTAGCTTTTTTTGCATGTTTGGATACACAATTAAAAATCATGGACAGAAACA ACTTTTCTTAGCTTTTACTTCTGTCCACCATGATCATGCACTTAGTTACTGCGCTTAATTTGGATTGTGTGGCAACATAA ATCCAAACATGAGTAGTCTTGGATTTTCAGGGTTTTTACTTAATGTGCTTATGCAGAAATATTTTCTCCATGCACATGTT CTTGCTTCCTTGGAATCTAATATAGTCTGGTAGGGTGCTGTTACACTTGCTCTGCCCATCTAGTTTGTTTTAATTTTTTT TTATGTAATTGGAAATTTCAATTTCAGCTTCAAAAGTTGGTGACTTGGGTTTGATATCCAACAGAATTAATGATAACATA CAGATATTCAAACACTCAAGCTCAAAATGTCATAATTTTATTGAAGCATTTTTGGACACTATTGTTAATGGAGATGTACT TGTGTGCTGTAACTTGAATCTTTCATGAAATTTTGTATGTTACGGCCAATTACCCTAACTTTTGTTTCTCAATCCAGCCA GCAGCTGCAAGAGGCTTGAGAAGACATGTCAAAGAATCACCTGTTCAGCACCATAGATCAGTTGAAAGAAATAATTGTGC TCTACAGAATGTATCTCCTGCTAGTTACACTAGCTCAGTGGAAGTAAGTGTGTTTGTGTAATTTTATATGTTCCATTTGA ATCTTGAGCAGTTCTATGATTTTTAAGATAGTAACAAGTCATGAAACTATATAAGTATGAATGTTCAACGAGGATACGAA CTTATTAGTTGCCTTTTCTTTAATGTGGTACTGTCATTAGTTTCTTCTTTGTTTTCTTTTTGTATTTTCAATTGAGAAAT TGAAATTGATTTGACTCTTGAGGAAACTCCACACCTTAGTCTATAAGCCATGAGAGATTTATTGTCAATTATGCTTTTGT GGAATTTTTAATAAAAATCTGAAAAATTGTCTCTAGATGGATCAAGATCTTCTGTTCAAAATGGTGTCTCATTTTCCTGT CCCATGTAGACTACATGATTTTTAAAATGATGCTTTTAGCCTTTATATCTAGTATAGTAGGATGAACATGCCATTTGCTT AAAACAGGTGAGACCATATAATCATGTAAACCCTACAAGTTCCTCAGACTTCAAGGGTAGGGTTGGAGAGTCAAGTTGCA ATCCTAAAACATCCAGAGAGTTATTCAAGGTACTCGACCGAATCTGGTGTCTTGAAGAACAGCATGCGTCAGATAAAGCA ACAGTGAAAGCCCTGAAAATGGAAGTGGATCTCTCCCGGGCACGAGTTAAAGACTTACTACAAGAAAATAAAATTAATAA GCAGGCAATGGAGAAGTTGATAAAGAAACTAACAGAGGACAAGCTTGTTAGGAAGAGCAATGAACATGTTAAAATTAAAG CTGCAGTTCAATCAATCAAGGAAGAGATACAAGATGAAAAGAGGTTAAGAAAACATTCAGAAAGCCTGCACAGGAAACTG GTTAGGGAGCTGTCTGAAGTAAAGTCTTCATTCTGTAGTTCTCTAAGAGATCTTGAAAGCGAGAGAAAAGCACGGATCGT TTTGAAGAATTTGTGTGATGATTTTGCCAAAGGAACAAGAGATTATGAACATGAGGTACATTCGCTTATGCATAGTGTTG AGAAGGGTCAGGTTAAAGGGGATTGTCGCCTTCGTATTTCAGAAGCTTGGCTTAATGAGCGGAAGAAAATGAAGCTAGTT CAAGCTAGCAGTGATCTCACTGACAGAGATTCAATAATTGACAAATTAGGTGTTGATATTGAAACATATCTTCTGGCAAT GAGTTCTGTTAACTTGAGAAGATGTGGTAATTCCTCCACAAAGGAGCTAAAGGAAATTTACCCTTACCTGGATTCATTGG ATTCCTTTCCACTAAAGGAGACCATAAGTGCACCTCATAATACAGTTGGGGAAGACTCGATCGGTACCGACATTTTTGAT CTGAAAAGGACTGCTGATGAAGAAGGACTTGACAAACTCAGCCACAGACTTCACAGCAATAATAATGCAAATGTCCGTAA AGAAAAGAAGGGAAGCCACAGTTCAGTGAAAAAACAAGTTCAGCCAAAAGAAATCATTCTGCTAACAATCACGGACAAGA ACATGTCATGTGATGAAAATGAGAGGGTGTTTGTTGAGAGGAAATCAAGTGAAATTGGAGGGAACAGAAGCACAATTCTA TTAAATGCCCCGCCTGGGGTATCAGCAATACAAGGTCCACCAGAAAGTGATAGGACCTGGACCAAGAGAATAAATTCAGG TCACATGCTTGACAACCTAGTTGGAAACAGTTCTTTGTCATCAGAAGGTGATAAGGTTTTTACCGAGAGTATTTGCAGGG AAGAATCTTGTGTCCATTCTGCAGTTATAGGTAATAGTAGTCCTGTAAAGCAGTGGAAACCTATTTTGGTTGTCTCAGAT TTTAACCAGTATGAGTCTTCTCCCAAATTGCATAGGAGGGAAGTAAAGGACAACAAATTGATGGCAAAACTGCTTGAAGC AAGGTTAGAGGAGCAGAGATGTCGCTCTAAAGCTAACAAAAGCTCTTTTTGTTCAGCTGATGAGAGCATTGGATTGTGAA TAGTTGCAATGGTATCACACACTGATCTTTCATCATTAGGGTACCACTACCAAATATCATTCTAATTCTAGAATTAATCT TTTTGTAAAAGACAATCTTATTGCTATAATACATGGTTAGATGCATGAAGATCAGAGTGGTGTCCCCTATCTGCCAAGGG GAGTTGCTCTAATATGTGTTTTGAATACACTAAAACAAAATATTAAAGGCTTTTCAACAATTTCATAAGAAAACTTGTAG AAAAATAAAAATAATTATATTCCTAGCATAACCCACAAGATGCCGAACAATAAAAAAACTGACACTTGGATGCTGATCTG ATTTCCATAGTTGTTCAGTCCTGCAAGAAAATGAACAACACCACCTTAAGTAATACTCTCTTGGAAAACATGTAAAACAA TTAGGAACAAGAACACAACATCATACAAAC
CDS sequence (LotjaGi1g1v0789000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGAAGAGAAAAGGGTGTGGAGAGAGATAAGAAAAGTGAAGGACTAATGGTGGAAAAGTTGAAAATTGGATGTGT TGTGGGGAAAAGAAGAGACCCTTCAACTCCACCACCCACTTGGAGACTTGAGTTTCCATCTCATAGTAGCACCAAAAACC AGGTTCAAGAGTTCCTCAACTTTCCCACTTCAGCACTCTCTGCCAGAAACCTCTGTGCCAAACTCTGGGAAATTCAGCCC CACCAATTGGCCCCTCTTGCCAAAATGAGAACCAGCCTTCGCCGCCGCCACGCCCACCATTGTAGGGACACAATTTATGA GCCAGCAGCTGCAAGAGGCTTGAGAAGACATGTCAAAGAATCACCTGTTCAGCACCATAGATCAGTTGAAAGAAATAATT GTGCTCTACAGAATGTATCTCCTGCTAGTTACACTAGCTCAGTGGAAGTGAGACCATATAATCATGTAAACCCTACAAGT TCCTCAGACTTCAAGGGTAGGGTTGGAGAGTCAAGTTGCAATCCTAAAACATCCAGAGAGTTATTCAAGGTACTCGACCG AATCTGGTGTCTTGAAGAACAGCATGCGTCAGATAAAGCAACAGTGAAAGCCCTGAAAATGGAAGTGGATCTCTCCCGGG CACGAGTTAAAGACTTACTACAAGAAAATAAAATTAATAAGCAGGCAATGGAGAAGTTGATAAAGAAACTAACAGAGGAC AAGCTTGTTAGGAAGAGCAATGAACATGTTAAAATTAAAGCTGCAGTTCAATCAATCAAGGAAGAGATACAAGATGAAAA GAGGTTAAGAAAACATTCAGAAAGCCTGCACAGGAAACTGGTTAGGGAGCTGTCTGAAGTAAAGTCTTCATTCTGTAGTT CTCTAAGAGATCTTGAAAGCGAGAGAAAAGCACGGATCGTTTTGAAGAATTTGTGTGATGATTTTGCCAAAGGAACAAGA GATTATGAACATGAGGTACATTCGCTTATGCATAGTGTTGAGAAGGGTCAGGTTAAAGGGGATTGTCGCCTTCGTATTTC AGAAGCTTGGCTTAATGAGCGGAAGAAAATGAAGCTAGTTCAAGCTAGCAGTGATCTCACTGACAGAGATTCAATAATTG ACAAATTAGGTGTTGATATTGAAACATATCTTCTGGCAATGAGTTCTGTTAACTTGAGAAGATGTGGTAATTCCTCCACA AAGGAGCTAAAGGAAATTTACCCTTACCTGGATTCATTGGATTCCTTTCCACTAAAGGAGACCATAAGTGCACCTCATAA TACAGTTGGGGAAGACTCGATCGGTACCGACATTTTTGATCTGAAAAGGACTGCTGATGAAGAAGGACTTGACAAACTCA GCCACAGACTTCACAGCAATAATAATGCAAATGTCCGTAAAGAAAAGAAGGGAAGCCACAGTTCAGTGAAAAAACAAGTT CAGCCAAAAGAAATCATTCTGCTAACAATCACGGACAAGAACATGTCATGTGATGAAAATGAGAGGGTGTTTGTTGAGAG GAAATCAAGTGAAATTGGAGGGAACAGAAGCACAATTCTATTAAATGCCCCGCCTGGGGTATCAGCAATACAAGGTCCAC CAGAAAGTGATAGGACCTGGACCAAGAGAATAAATTCAGGTCACATGCTTGACAACCTAGTTGGAAACAGTTCTTTGTCA TCAGAAGGTGATAAGGTTTTTACCGAGAGTATTTGCAGGGAAGAATCTTGTGTCCATTCTGCAGTTATAGGTAATAGTAG TCCTGTAAAGCAGTGGAAACCTATTTTGGTTGTCTCAGATTTTAACCAGTATGAGTCTTCTCCCAAATTGCATAGGAGGG AAGTAAAGGACAACAAATTGATGGCAAAACTGCTTGAAGCAAGGTTAGAGGAGCAGAGATGTCGCTCTAAAGCTAACAAA AGCTCTTTTTGTTCAGCTGATGAGAGCATTGGATTGTGA
Protein sequence (LotjaGi1g1v0789000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERREKGVERDKKSEGLMVEKLKIGCVVGKRRDPSTPPPTWRLEFPSHSSTKNQVQEFLNFPTSALSARNLCAKLWEIQP HQLAPLAKMRTSLRRRHAHHCRDTIYEPAAARGLRRHVKESPVQHHRSVERNNCALQNVSPASYTSSVEVRPYNHVNPTS SSDFKGRVGESSCNPKTSRELFKVLDRIWCLEEQHASDKATVKALKMEVDLSRARVKDLLQENKINKQAMEKLIKKLTED KLVRKSNEHVKIKAAVQSIKEEIQDEKRLRKHSESLHRKLVRELSEVKSSFCSSLRDLESERKARIVLKNLCDDFAKGTR DYEHEVHSLMHSVEKGQVKGDCRLRISEAWLNERKKMKLVQASSDLTDRDSIIDKLGVDIETYLLAMSSVNLRRCGNSST KELKEIYPYLDSLDSFPLKETISAPHNTVGEDSIGTDIFDLKRTADEEGLDKLSHRLHSNNNANVRKEKKGSHSSVKKQV QPKEIILLTITDKNMSCDENERVFVERKSSEIGGNRSTILLNAPPGVSAIQGPPESDRTWTKRINSGHMLDNLVGNSSLS SEGDKVFTESICREESCVHSAVIGNSSPVKQWKPILVVSDFNQYESSPKLHRREVKDNKLMAKLLEARLEEQRCRSKANK SSFCSADESIGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 641 | 641 | 6.4E-189 | – | |
| PANTHER | 1 | 641 | 641 | 6.4E-189 | ||
| Coils | 202 | 240 | 39 | - | – | |
| MobiDBLite | 457 | 478 | 22 | - | – | |
| MobiDBLite | 457 | 477 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0789000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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