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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0791900 |
| Transcript ID | LotjaGi1g1v0791900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | helicase with zinc finger protein; TAIR: AT2G46420.1 helicase with zinc finger protein; Swiss-Prot: sp|Q1QT79|ARGB_CHRSD Acetylglutamate kinase; TrEMBL-Plants: tr|I1NCK6|I1NCK6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0791900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136384296..136392739) extracted from Lotus japonicus Gifu genome v1.2.
ATCTAACATACTTTTTGGTGTAAAATGAAAAGAAGCATTAACTTTTCTATTATTCTTCTTCCGTCATTACTGCTGAAGCC GAGGAAGGAGTGTCCAAACCGTCTCTCTGCAGTGAACTGAGAACTGAACAGAACACCCTTTTCTTCTTCTTCTTCTTCCT CGTAACCTCTCTCTCTCTCTCTTCTATCTAGCTCTCTCTCGTCGAGTCATGGATTTTCCTCATGTATGCAACTTCCATTT TCATTCATCCATTCAATCTCTACCTTTTTTGGTTTGAATTCAAGATTTTCTTGGTCACTGCAATTTCCATCCGGCGTTAC GTCGACTCCGTTCTGAGCTCAATTCGCTGACACAACACAACACAAACCCTTCATTTCTTGCACTTTCTGCCAGATCTTGT TTCTTTCAAATTTTTGTATCTTCTACTTCCAGTTTCTCTCTCGTTCAGTATCCAAACGTGTTTGAATCGATTCATCAGCA TAATACTAGTTACTACCCAATCCACTTCAGCTTGAGGGTGTTACAGACATGTATGTATGCAAAACATGTTGAGTTCAGAT TGTAGCAGGTAGTTATTCTTCAAATTTCACAAAGACATGTGGTCAACCTGCTCTCAGCACCAATGAGTAATTTACAGGTT CTCTAACGTTGTATTCCTTTAATCTTGTTACTTAATTTGTCCACAATTAATGATTGCCTTGTGAATCTGAATCTCTGATG TGTGTTTGCTATGGACAAATTTGACCTAGGGAACTATTTAATGAAATGAATTCAATACATTTCATCCATGGATTAGCATT GTTATTGTTGTTAAGTGATTGAAATCTTTTATGGACTGTCAGAGCCCACAAGAATTACAGTCCCCAGCTCAAGCTTCTCT AGATTCCCAGAGTGAACAACCAAACAATCACACAACTGATGTCCCCGTTACTGACTCAGGTTCAGCATCAGCATCTGCAT CGAGCAACGATAGCAAAAAAGTTTCGCGGCAGGATATTGAGCTTGTAAGACAATTCATTATTTGTTAGTGTCTAACTGGA TAATTTACAGAAGCTAATCTGGACTGATCTGTTTTTTTTAGTTTCCATTTTAAATATATATATTCAAATGAACTTTGCAG GTCCAAAATTTAATAGAAAGATGCCTACAATTATATATGAATAAAGATGAAGTGGTCAAAACACTCTTGACTCGGGCAAA GATAGACCCTGCATTTACAACTCTGGGTGAGGCATCTTGAAGTGTCTGTCATGTCATATATTTCATCCTAACAATGATGA AGATAATTTATCTTCTCAGTTATTCAAATTTTTATTTTCATAAATTGTTATCCATTTCAGGAGTTAATGATGTGGAAACT AGATATTAGCTTAATTTGATAGTCAAGACATGCATGATTTTACTTTTGGAAAAAAAAATGGTATTCGCTGTCTTTTTTTT CTGCTTCAAAACGTAGACTGGTAGATGTCAGATTGCATTGCCTTCTATTTTATGCCCATTTCTTTTTGTTCAGTATGGCA GAAGTTGGAAGAGGAGAATGCCGATTTCTTCCGGGCCTACTATATCAGGCTAAAATTAAAAAAGCAAATACTTCTGTTCA ATCATTTGCTTGAGCATCAGTATCATCTGATGAAGTATCCCTTGCCTGCAAAGGTTCCTTTTGCTCCCATGCAGAATGGA ATCCATCCAATGCCTGGTTAGTTCTTGATTTATACTGCATGACTAATTGACTATTAATTAACTGCAAGTTTTAAGACATG CCAAATCATTCTGACTATTGTTCTCAGTACACTGCTAAATTCCAATGTAATTAACAAGGATCAGGCAACATTGATCATGT AAAAGGACTTAATGTATACTCCCCTTCCCCCTTACGAGAAAGAACAACTAGTGAGAAGATGCACAGGGCTCTTGAAAGTT ATTCACACCCATGTTGCTTGTTTTATAGTGTCAATGATCAACTGTGTGGGTCTTTGTGCTAAACACTAATGGCACCTTCC TCCCCTTTGAGAACAGTGAAGCTTTAGATCAAAGGCTCATAGGTGTTAGAAAGCTAGTAGTTAGATATGGATAAAAACTG AGATTTATAGTATTCGCTCTAGAGATCCCCTTACTCCCACTGTTATAGGATCAACAATGCAAGAAGCTGATCAATGCAAG GAAATGATAAACTGAAAATAGTGAAGACTGGATAAACAGCTCTTCACAAGGTTGAAACCTCCCTACTCCTGAGTCACTGA ATTTATGCCCTCACACTTATCCTTCTCCTACATTTATGATTTAACAGACTCTGCCCATAATACTCTGTTATAACTTGCAT AGCAGTCCTTGTTCCTAGTCACACAATTGTACATTCTATTGTAACAATTTAAAAACAATCTCTATTCATGTTCATCCTTG ATTCCTTGCTCACATGCTTCTTCTTCCCATTGTATACTTGGTAATTTGGGGAGAGGGGGGGGGGGGAGTTCAACAATAAT CTAACAGATACTTGTGCTCTTTTATGTCACAATTTCCTTTTACTTTTATCATGATATCAAGCTTCACATTTATCTTCTTT ATAGATGCATAACTTCACTTCCTCCAGTGCTTTTCTTAGCTATTTTCTCTTGTGCTGTAATTCTTCAACACATTTATTTG CAGTGCAGTCAACAACCTACCTATGGGATACCCAGTGCTACAACAGCATTCCATTCCAGCTGGTCAACCACATCTTGACT CCATGAATGGTGGTATATCAAGTTGTCATGTGGTTAATGGAGTCCCTGCACCTAGCAACTTCCATCCCATTCGGACGAAT TCTGGGAATGGGTAAGAACTTATCCATCCCCACATACTTCTTTCACTTTTGTCATTCATTGGACAAGTATAATAAAGGTC TTCTCTTTAGGCCTTATGGGGTTTTCCCATTGGCTTTGCATGGCTGGCATTTGTATTTCAGTTAGTCTAAATATGTGTAG ATGGCTGCCATGTATAACTACAGCTGGTTTCGTCAATGAACTGGTCTCTGGCTTGTTTAGCAATGTGTTTCTGTTTGTTT GTTAAAATAACCATGATGTTCTTGATGGGCATTTAATTTACATGTTATGGCTGGTGCTGGTCACCACGCAAAGATATTCT CCATTTAAATTTGTTAGATATAAAAATAATCATCATCATCTTCCTCTTTTTAAGTAATTTGCTTGATAGAATAACAGCAG CTGCTTTTATCTTTTTTGAAGAATGGTGATGAACCACAGTGCTCCTGATATAAAACCTGTTATCCCACCAAACAGTGCAA TGTCATCCTTATCAGAAATGCCAGTGAGTCCAGCATCGGTAGCATCCAGTGGCCATTTCCCCTTCACTGGATCAGACATA CCAGGAATGGGGGCAGATGCATCTGCTCTGGATGCCGCATTTGCATCTGATTTGGCAAGCTCTGCCGGACTGCATCTTGC ACCAGATAATGGCACTGCTATTCCCAGATCCCTCGATCAAATACAGTGGAATTTTAGTCTATCTGATCTAACAGCAGATT TGTCAAACTTGGGAGGTAATTTCCTTTTATACTTTGAGATCCACTTATAGATATATAGTCATTCAGCGGTCATCTGGATA TATAGTTGTTTGAGATTTACGGCTTATGATGAGTTCAGGACATTTGGGTTCTCTTGCATCTTGTTTTTAATTATTTACCC TTTGTGGACATCTTCATGCTTTGTTTATGAATTATCTTTCTTTGCAGATCTTGGAGCTCTGGGAAACTACCCTGGTTCAC CATTTATGCAGTCTGATTCGGATATTTTGATGGAATCCTCGGATCAAAAGGACATAGGTAATTGTAAACGCATATATTTA ATCTTAAATTTTTATAAATTTAGTTTGTAATAATGGCCAAAAAGAGATTTAGATTACAATCAGTAGAATCTACCAAATTC TGGACCTCCACAAAGTGTATAAGGTATCAATGTACTCCGTGAGGAAAGAGTGATGCATGGCTTGCCCTAAAACAAAACTT TGTCAGGGGGACATCCTCCACGTCGGGTTTACAGTCATGAAAGACCACAGGGAGCATAGTATATATCTAGAACCTAAACA TTGACTGTAAACTCTGTAAAATCTGGTTAGAAGAGGCTTTCACATAAATCAAACTATGACAAAGACCCTTGGTTAAACTA GGTTCAGTTGTTCACAGGAAAACGTCTTTAGGTGGCATAAATTTCATGTCATTCTCATCAAGTTTAATCTGTTGGGTAAA AACTGGTAGCAATGCAACAACTTATTTTTAAAACAAAAAAATAGCATATTGGACTGTAATTGAACTTGCATATTTTGGTG GATGGTGAGTCACATAATTTGTCAAATGATGTTATATATAAATAGATAAAAATGGTTGTAATTTAAATTTGCAATTTTGG TAGCATTTACTGTTATTACTTCTAAGATTTTGTTATACCTTTGTTTTTATTTCAGTGGATGACTTCTTTGTCAATACAGA GCCCCACGGCTCTCAGTCAGATGAGGAGAGAGGTCTTGAGTGAAGTTGAGGCAAGTTATGTTTCTGATTGTAGTCATTAA GTTAGATAAATTTAGGAGTACAAAATGCTTTGATTACTATTTAGATTGCTCAGCATGCAAGCTTACTGTTACCGAAGTGG AGGCAGCATGATGCATATCATCAGAATGATGGTAAAAAATATCAATTGTTAGCTTTAATTGCAATCTTTTGAATTTTTTG AGAAAACTGCGAGTTGGAAAAGTTGGGCACTGTGTTTAGGAAGTAATTGATGCATTTGGATATATATTGGTTCGATCTTT GTTGTGAAGATTGATGTGATGTTGTTATAGACATTTTGTATTTCACTGATGAGAACAGGTTGCACTGTTATTCTTCAGTG CAGAATAATTTTACTTCGTTGAAGTATAATTGTAATTTCTTCTAAGATACAAGCAGTTTTGATATCATAAACTCTTGTTT CTATAGCTATGTTTTGTAAAACTATGATAGAGACTCGAATGCTAAATGGGGAATGGGCTTAGGTAAGCCCAAGATATGGA AAGTTTATGAGAGGAAGAGAGGGAAGGGTGCTGAGGTGTCCAAACCCACATGAGGAAAGAAGGAATTAGTTAGTAAGTTA GTATATAGTATGATGAGGTGTGGTGTGAGAACGCACTCTTGACTACATTTCTGTTATAGAGAGAGAAAGAGGTATCTTTC TTAGGGAGGTAGCCATTAGAGCTCCTTTGGGGTTGTTAGAGTTTTCTCTAGCAATACACTTATCTTTACTTCTGTAATTC TCCTTCTACAATCAATATATAATTCAATTCCAGTCTATTCTACTTTATAATTCACTTTTCTGTTCCAAACATCCATCAAT TGGTCCGACCTGCCGGATCTTCATTACGCCGGAGAATCAGTTTCCGTAGATGCCACCCAAGATGACTGATCGCATGGAAG CGTTGGAGACTCAAATGGGAACGGTGACTGTGACGCTGCAAGAGCTCGCACATCAGTTGCAGCAGCAGAACTTGGTTCTG ACTGAACTGAGCAAGGCATTGTCTCAGGGAAATTTGGCCAAATCAGTCTATGAAAAAGAACTAATGGCCTTAGTTCTTAG TATACAGCACTGGAGACATTACTTGCTTGGCAAGTCTTTCATTGTGTATACTGACCACAAGAGCCTTAAGCATTTCTTGC AGCAGAAGATATCTTCTCCTGACCAACAGTGCTGGCTGGCCAAGCTCTTGGGTTACCAGTTTGAGGTAAAATATAAGCCT GGCCAGGAAAACAAGGCTGCTGATGCCCTTTCTAGATGCTATGATGAGGGTGAGTTTGCTAGCTTGGTTTCTTTTCCTTT GTGGGAAGACAGGAAGAAACTCCTAGAGGAAATTGCGTCTGATGACTACATCAAGAAACTGTTACAAGAAGTCCAGCAAG ATCCCCAAGCCAAGCCTGGTTTTACTGTCAAACAAGGGGTGCTCTTATATCAAGGCAGGCTAGTCTTATCACCTACATCC CCATCAATTCCATGGTTGCTGGAAGAATACCATAGCTCACCTACTGGGGGTCATTCAGGGTTCTTAAGAACTTACAGGAG GCTGGCTGAAACCCTATATTGGGTAGGGATGCAGAAGACAGTAAGAGACTTTGTAAGGGCTTGTGATATTTGCCAGAGGC AAAAGTACAGTGCCATGTCTCCAGGAGGGTTACTTCAACCCCTACCAATTCCCAATGCTGTGTGGGAAGACCTCTCCTTA GACTTCATCACTGGTTTACCCAAGTCTAAGGGTTATGAAGCTATCTTGGTGGTGGTTGATAGGCTTTCTAAATACAGTCA TTTCATCTTGCTCAAACATCCCTACACTGCAAAGTCCATTGCTGAAGTTTTTGCCAGGGAAATAGTGAGGCTTCATGGCA TTCCTAACACTATCATCAGTGACAGAGACCCAATCTTTGTGAGTCATTTCTGGACTGAATTGTTCAAGCTGCAGGGGACC AAGTTGAAAATGAGCTCCTCTTATCACCCTGAAACTGATGGCCAGACAGAGGTTATAAATAGGTGCCTAGAGAGCTATTT GAGGTGCTTTGCTTCTGAACATCCTAGGACTTGGTCTTTGTGGGTTCCTTGGGCTGAGTTTTGGTACAACTCTACTTTCC ATTGCTCAATTGGTCAAACTCCTTTTGAGGTGGTCTATGGCAGAAAAGCACCACCCATTATTAGGTTCTTGGCTAATGAA ACAAAGGTAGCAGCTGTTGCTTTGGAGTTAAGTGAGAGGGATGAGGCTTTAAAGCAACTCAGGGCACATCTACAAAGGGC TCAGGAGCAGATGGTTAGCTATGCTAACAAGAAAAGAAGGGACTTGAGCTTTGACAAGGGAGAGTGGGTGTTCCTGAAAC TCAGGCCCCATGGGCAGCAATCTGTGGTCAAGAGAATCAATCAGAAGTTGGCAGCTAGATTCTATGGTCCATTCCAAATT GAAGAACAGATTGGAGTTGTTGCCTATAAGCTGAAGCTTCCCCCGGAGTCCAAGATCCACCCAGTCTTCCATGTGTCTCT TTTAAAGAAGGCCATAGGAAGTTCTCAAGTTCAGGGAGAGTTACCAACAGAATTGGAAGTAGGAGAAGCTACTGACATTT ATCCTGAAGTAATCTTAGGCACGAGAAGCATCAGACAAGGAGACAGAGAGGTTCCACAGAGTTTGGTCAAGTGGCAAAAC AGTTCTGTGGATGATGTTACATGGGAAGACAATGAAGTCCTAGCAGGCCAATTCCCAAACTTCTGCCTTGAGGACAAGGC TGTTTCTAAGGGGGAGGGAGTTGATAGAGACTCGAATGCTAAATGGGGAATGGGCTTAGGTAAGCCCAAGATATGGAAAG TTTATGAGAGGAAGAGAGGGAAGGGTGCTGAGGTGTCCAAAACCACATGAGGAAAGAAGGAATTAGTTAGTAAGTTAGTA TATAGTATGATGAGGTGTGGTGTGAGAACGCACTCTTGACTACATTTCTGTTATAGAGAGAGAAAGAGGTATCTTTCTTA GGGAGGTAGCCATTAGAGCTCCTTTGGGGTTGTTAGAGTTTTCTCTAGCAATACACTTATCTTTACTTCTGTAATTCTCC TTCTACAATCAATATATAATTCAATTCCAGTCTATTCTACTTTATAATTCACTTTTCTGTTCCAAACATCCATCAAACTA GGTGGTATATTAGTTGAAAATTGATAAGCTTACTATGAGTGAAGCTTATATGATGCATAAAAGGTGTGCTTATCAACCAT TGGAGTTTGCTATCTTCGATTCAATCTTTGTCCCATGACATCAACAGAGCATCTGGACCATCAACTCATGCATAGATGGT GTATTTTGTTTCTTGGACATCCTTGCAAATATTGCAACACCAATTATCATTGCAATTTGCAACCATTGATGTTCACTCGA GAATCTAGGATTCTTCTGGCTTTGGTGGTCTTTTTCACACCCTTAGTATTTTGTTAATTACCAATGACAATATTATAACT ATTTTTCAATCAAGAAAGTTAGATATAGAAAAAAAAGCTCCATCAATAAAGTGATTAAAGTTGAAGAGTTTTTTTAAAAA AAATGCAAGACAGCTTTGCAAATCATAGATATATGACTTATTAATTTTACTCCAGTACGAGATTAATAAGGTGAAAGAAT ATGGAGGCAAAAAATCAGAATTATGTGATCAATGTCAAGTATAGCACTGGTAAAAATAAAAGGATATGTCGGGACCATGA TCTGCCACTGTTCGAATTTTATTTCTTGCATGGGTGCTACGGATGGTCTAATCAGAGGAATGAAAGTGATTAACTCAGAG CTCTTCTAAGTGTATTGGTGGGTGGAGGGGGGTGTTCGCGGATTGGATTGCATCGGTTTTGAGGAGAAAAATCATTCGAT CCGATCTCATCGGTTTTATGATTTTGTCATCCAATGGATTTTTT
CDS sequence (LotjaGi1g1v0791900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAATTTACAGAGCCCACAAGAATTACAGTCCCCAGCTCAAGCTTCTCTAGATTCCCAGAGTGAACAACCAAACAA TCACACAACTGATGTCCCCGTTACTGACTCAGGTTCAGCATCAGCATCTGCATCGAGCAACGATAGCAAAAAAGTTTCGC GGCAGGATATTGAGCTTGTCCAAAATTTAATAGAAAGATGCCTACAATTATATATGAATAAAGATGAAGTGGTCAAAACA CTCTTGACTCGGGCAAAGATAGACCCTGCATTTACAACTCTGGTATGGCAGAAGTTGGAAGAGGAGAATGCCGATTTCTT CCGGGCCTACTATATCAGGCTAAAATTAAAAAAGCAAATACTTCTGTTCAATCATTTGCTTGAGCATCAGTATCATCTGA TGAAGTATCCCTTGCCTGCAAAGGTTCCTTTTGCTCCCATGCAGAATGGAATCCATCCAATGCCTGTCAACAACCTACCT ATGGGATACCCAGTGCTACAACAGCATTCCATTCCAGCTGGTCAACCACATCTTGACTCCATGAATGGTGGTATATCAAG TTGTCATGTGGTTAATGGAGTCCCTGCACCTAGCAACTTCCATCCCATTCGGACGAATTCTGGGAATGGAATGGTGATGA ACCACAGTGCTCCTGATATAAAACCTGTTATCCCACCAAACAGTGCAATGTCATCCTTATCAGAAATGCCAGTGAGTCCA GCATCGGTAGCATCCAGTGGCCATTTCCCCTTCACTGGATCAGACATACCAGGAATGGGGGCAGATGCATCTGCTCTGGA TGCCGCATTTGCATCTGATTTGGCAAGCTCTGCCGGACTGCATCTTGCACCAGATAATGGCACTGCTATTCCCAGATCCC TCGATCAAATACAGTGGAATTTTAGTCTATCTGATCTAACAGCAGATTTGTCAAACTTGGGAGATCTTGGAGCTCTGGGA AACTACCCTGGTTCACCATTTATGCAGTCTGATTCGGATATTTTGATGGAATCCTCGGATCAAAAGGACATAGTGGATGA CTTCTTTGTCAATACAGAGCCCCACGGCTCTCAGTCAGATGAGGAGAGAGGTCTTGAGTGA
Protein sequence (LotjaGi1g1v0791900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNLQSPQELQSPAQASLDSQSEQPNNHTTDVPVTDSGSASASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKT LLTRAKIDPAFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKYPLPAKVPFAPMQNGIHPMPVNNLP MGYPVLQQHSIPAGQPHLDSMNGGISSCHVVNGVPAPSNFHPIRTNSGNGMVMNHSAPDIKPVIPPNSAMSSLSEMPVSP ASVASSGHFPFTGSDIPGMGADASALDAAFASDLASSAGLHLAPDNGTAIPRSLDQIQWNFSLSDLTADLSNLGDLGALG NYPGSPFMQSDSDILMESSDQKDIVDDFFVNTEPHGSQSDEERGLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 1 | 51 | 51 | - | – | |
| PANTHER | 3 | 361 | 359 | 9.4E-181 | – | |
| PANTHER | 3 | 361 | 359 | 9.4E-181 | ||
| TIGRFAM | 57 | 113 | 57 | 3.6E-29 | ||
| Pfam | 60 | 111 | 52 | 5.0E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0791900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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