Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0001900 |
| Transcript ID | LotjaGi2g1v0001900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb/SANT-like DNA-binding domain protein; TAIR: AT4G02210.1 Myb/SANT-like DNA-binding domain protein; Swiss-Prot: sp|Q8D8P9|HIS1_VIBVU ATP phosphoribosyltransferase; TrEMBL-Plants: tr|K7LCA7|K7LCA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0001900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:1111193..1117949) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGTGGAATTCTGAAAATACTGGTAATTAAAAGAGGTAATTTAATGAAGGGATTATCGGGTAATCAAAATACCCTCAA AATTGGAAGTAATTGGAAAATCCCACACTGGCTCGTGTCTCTCACTCTCTCGTTCTCGCTCCCAATCTCACTCTCTCTGC AATCTCGCTCTTTCGTTCTCGCTCCCGATCTCAACCTCTCTGCGATCTCGTTCTCTCGTTCTCGCTCTCCCGATCTCACT CTCTCTGCAAATCCCGATCTCACTCTCTCTGCAATCTTGCTCTCTCGTTCTCGCTCTCCCGATTCATGGAGTGGCTCTTT CTTCCCTCTTGATTCAGGTAAAATCTCTTGATTCTTTCACAAATTTTGCAGTATTGTTGTTGTGGTTGTTGTTGTTTTTT CGAATTTGATTTTGTTTTTGGAGTTGAAAATATCTGTTTTGTTCTTATCTTGAGTTTTGTTCGTTGATGCTAGTACTGGG TTTGTGATGTTTTTTTCTCCATTTTGTGCCTGGTTCAGAAGCAGATGAACATAGGTGAGGAAGACAATGGTTTCTATTTT TTTACCAAAACAATAATTAGAGTTACATAAGAATTGCTCAAACTGAATCTGAAAATTGACTGGGCCTCAATTCATGTGTA AATCAAAGGTACTTTAATCCTCTATTGCTCTTGGCCTTGACCCACCTTGATTTCCAACCATCCTTTTGGAATTTCTTTGG TCCTTCCATGGTGATGGTATGCTTTTGTAGGTGTATTTCTAGATTAGGAGTTTGATGAATAAAGAGTATTTTTATAGCAA GTAGCAATAGCATGATGTGTGTTATATATAATAAGGTGCATTGCATTCCTCAAGCATTATTCAAGTTGTCATGACAGTGA TTTGATTTGTGTTTATTGTCACTGTTTTTTGCTAATCCTTGATGATCGGAAAAATATTTCAGGCTACTACTATAAGTGGA TACACAAGCAACTCTGCTTCTTCCAAGAAGTGCATAAAGAAGAAGGTAAAGTTATTCATTTCATCTTATAGTCAAGCCTG TGATTTTAATATTTGTAGTGAGTTTTATTTCAAAACAACCATGGACATATTAGGATAGAAAGAACTTTTCACTACACTTC AGACGTTCATTGCTGCTGCTATATTGTCTTGCTATAATAACTAGGTAGTATTAAAAGATGAATTAATTTATCAGCAAAAA GAATTTATGGAGTAAAGGAGATTTTATTACATTTTCATTGCTGTGGTTATTCCGGAATAGATTAAGTTTAGTTGGAAAAG GGGTCCATCAACTCTGCTACTATGTCCAAGTTTAGTTTTATAATCTGCACAGAGATAAGACTTGCAGCTTATAGTCTGAA TTGATTTTAGAACATTTCATCATAAAACCAAACACATATATATGTTTATTTCATTTGGTCAATGGATGAGGGGGAAAGCT TTTTCATGAGTAGCTTCCATATTGTCTATGAGAAAAGAGAAATTTATTGAAACATGTTAGAAATCACTCATCCATAATGG AAAACTAAGACAAGAGGAAAAAGCTCAATGCTTACTTAGTCTTTTTTTTAATGAATCTAACTGAAAGCTCCACACTACTA TTTAGAGAATGTTTTAACTTGACTCTTCTCATTTTCTTAGTGAGCTTGTACACATCCCTTGTCCTTTTTAATCACATCTT ATCCATTTTTATGTTTAAACTAGCTGATTTTGAATCTGATTGAGTTAGCTTCTCTTACTTCCTATTTTCTTTATAGTGTC ATGCAATATTGATGTTTTATTATATGTTTTTTTTAGTTAACAAATGGATCTTAGAGTAGTTGACACTTCAGTTCTTTTAC GAAAACGTAAAAGAAATGAAGAAGAAGAGGCAAAATTGCAGGAGCAAATAACATTCATTGTTGCTAGTGTCATTGCTATG CTTTTAGGTGTAGTAGCTTGGTATCATGAGATGCATTTTGTTAAGGAACCGTCCCGAAATTGGGAATTGGAAAGAAGCAA TTTCCTTAATCGTCTGTATAGAGGAACCGAAAGTGATTGCATTGAACAGTTAAGAGTCAGTAAAAGGGCATTTGTTAAAC TTTGTGGAATTTTACAAGATAAAGGACAGTTGGTAAGGACAAGAAATGTCCCAACGATTGAAGCAGTGGCAATGTTTTTG CACATCCTTGCTCACAACCTAAAGTACAGAGTAGTGCACTTTACCTATTATAGATCCAAAGAAACAATAAGTAGGCAATT CAACAATGTCCTACGAGCTGTAATGAAAGTGAGTGGGGAATATTTGAAGTTTCAAGACCATAATAATCTAGAGGGATCTG AGGCATACAAATGGAGATGGTTTCAGGTAAACTTATCATAAGCTTGAGTAATTATATGAGATTTCTAGTAATTACAACTT ATTTATGATTTTTAAACTTTTTTAGAATTCGATTGGAGCACTTGATGAGACACATATTCCAGTAACAGTGGCAGCAGAAG ATAAACCTAGATACCGTAATATAAAGGGTGACATCTCTACGAATGTGTTAGGGGTTTGTGGTCCAGATTTAAAGTTTATT TACGTGTTATCTGGTTGGGAAGGCTCGGCAGGAGATTCACGAGTATTGCGAGATGCTTTACGTCGTCAAAATCACCTTCA AATTCCGAATGGTAATATTCTCAACCTTGATACTTTTTTTACTATATTAAATACAATTATATGATTTTTTTTTCTTGGAA AAAAACCATCGCAGGTAAATACTTTCTGGTCGACGCAGGATATACAAATGGCCCAGGATTTTTAGCACCTTATCGAGGGA CTAGATATCATCTCAATGAGTGGATTGGAAACACCCCTCAAAACTACAAGGAGTTGTTCAATCTCCGTCATGCAAGTGCA AGGAATGTAATTGAAAGATCATTTGGGATATTGAAAAAACGATGGAGTATATTAAGAACTCCATCTTTTTTTGATATAAA AACACAAATAAGAATGTTTTATAAGATATGAACAACAATATGACCCAATTTTAGAGGTCCAAGACTTGGAGCTTTTATCG GTTGTTGATGAAGAGTTAACCAATCAACATGGGGAAACAATTACAAGTAATGTTGCAAATGAGGTCACAACTATTCAAGT ATATGAGGCATGGACAACGTTTCGGGACACTTTAGCAATGGATATGTTTGTTGAATATCAACATAGAAGAAACTTAGTTT AGGGACAACATGTTATCAGTTGTCTTTGCTTTCTACCTTGTTCGTTGTTTCTGTTATCTGTTTTTCCATTTCTTATGTTA TTTCTTGTTTATTTCTGTAGTTGCTTTGTTTTGTTGTGTGTTGGCTCACTTGGAAGAGCCTTGTTTCCAAGCTTTTTATC CTATTAATATTAATTGAATGATTGATCAGAACTAACTGTGACTTTTTATCCTATTAATATTAAAAGCTTAGTATGTTGTC TTGTATATGTATATTCTGTTTATTTTCAGAAACTCTTCATGTTTATTTATTTTCAAACAGGGTTACAGCCAGACTAGGGA ATTGGACAGCGAGGAGCTATTGGAACAGTTGCTATATCGACTTGTTGGTTGCCGGGTAATATTTTATAACTTGAGGATAT TCATCATCTTTTTGTTATTTGATCTGTTTGCTGTGGACACTTCAATTAGGTTCAAGTGTTTCTATTTTACTACTGTATTT TCTTAAGTATTTCAAACTGATTCTGAGAAAATTATATATACTAGATTAATTCAGTGTGTTTTAGTTTCTTTGTTTTTTCT TAATTTACTTAGAGATTCGTGCTTAACCTTTTATAATCACTTTTTCCATCTAAAGTGATTATGTGAGGTTCTAAACACAC TGAAAAATATGACACACTAAAGTGATTATTTCTGGTGTGGGCACATGACATGCAGTATTGATTTCCAAATAGACAATAAC TGGATCTAGTAATTGGACTGAGAAGGGTAGTTGAATCACTTGAAGTTCAATCTTGTCTCACATTTTCACCAGAGTATAAG ATCATAGGGGTAAAAGTAAGAAGTAAAAACACTTTGATCATCACAGGCTTTTAAAATGAATTCTGATATGTGAGTTCAAT CCAATTTTAATCTACCATAAACTGTAACAGTGTTGGTAAATCCGCAAGTGTACGGAATCCACCCGGTTTTAAATATCGAA CCGCAGGGATTGTGAGTGAATAGATTCGGTTTAAGCCTCGAGTTTGAAGGTTTGTTTTATTGAGGCAAACATATGTCGAA GTAGTAATAAGGAAAAAGGAAATATAAATTCAGAAATGAAACAGAAAATGAAAAGAAAGAGTGATTTACTTTGGGTTCTT GCTCAACTAATCAATTCAAGCACATCATTCTAAGCACATATTCTCATGAATCTCTCCTTGACGTTATAGCCTAAGCAACT ACCTATCGATGCCTCGCATAGATAATTCTTTCAAACCAAAAGATAAGCCCAATTCCTTGCGTACTTAAACATTTGTTTGA AGCATAAAGATTATAAAGTTCAGGCCAACAAACCACAACCCTTCCTCTATTCCTAGTAGCAAGTATAGAAGGGGTAATCC CAAATCGGTTCCCTAATCTATAACAAACTTCCGTTCTATTATAGAAAAGCATAAAGCTAGCACATGTTCTAACTTGAAAG ATAAAGCATGGATATGGGATTCAAGGAAAGAAGAAGAACATGTGGGAAAGAACTTAAGATTATGACTTAAAAGGAAAAGT CTTACATAAAAACCAAAGTAAAAGAAGAGAGATTAGCCAAGCATGGCAAGAACCTGAATTACAGGTTCATGCTTGGCTAA GAACCTGAATTACAAGCTTGGAAGCCTTCTCTCACTCTCCTAGATGTTCCTCTCCTTCTAAACTTATGTAAAAATGGAAT AGATATCAAAGATTACCAAAGAAAATGACTAAAATCCTATTTATAGGCAAAAATCACGAGTTTGGGCTGTTCCGGGCGCT CAGGCGCCAATTCAGAGCGCCTGAGTGCTAATTCCATGCTAAAAAAGTGCCTCTGGAAGGCAATTGGCGCCTAGGCGCCA ATTCAGAGCAATTGGCGCCTAGGCGCCAATGGAGCACGCCTAGGCGCTCTTAACTCGTTGGAAAGCCTTTTTATCTTCAT TTTAACTCCTCTTTACTCCTCTTTAAGCCTCCATTCAATTCTCCAAGCCTCTAGACCGTCCCTCTTCAGCTGATTCAACC TGAAACCTTGATGAACAAACTTGGAAAATATCTTGAAACTTAAAGGTCAGTTTTGCACAAAGGCCCTCAAAACAAGTGGA ATTTACCTAAGACTCCTAAACTCTAATAAAATGCAACTAAAGTCCCTAATAAACTATGAAATTACCTAAGTGAAGCAAAA ACACAAAGAAAGATAAAAATGCATGAGAATGCATGAAACACTACATGAGACTCAACAAAAAGACTCAAAACTAGCAAGGA AATTACCCTAAAAACACTACTAAATCCGGGTCATCAAACAACAATCAGGATCATAATCACTTATGATTTCTGCACATGAT GTATTCAATCATGGAAGCTCATTTTGCTGCTATTATCTTTGTTCAGTTCTGTGGATGTATTTCAAAATTCTTCTGATTAT TATTAATTGTCTAATGTTTGTTTATGTTTGAAGGAGAGATGAGGGGAAAAAGGAAAATGGCGGAAGCTAGTAATGAGGAT AAGAAAGATGATAGCAGCGCTTACTTTACTTGGAACTTGGAGATGGACCGTGCACTTGCTGATATACGTAGAGATCAAAG AAGCATGGGAAACAAGAGTGATGGTGCATGGAAAGCAGTGGCATATAACACTGCGGCTCAAATGTTGTCTTCACGCTTCA ATTTGCAGTTTATTGGAGAGAATGTTAAAAATCGTATCAAGCTGTGGAGATCATGGTATGGCATTGTTAGTGACATCCTT AGTCAAAGTGGTTTTGATTGGGATGGAACCAAATATATGATTTCTGTTACAAATGAAGATGCATGGAATGGGTATGTTAA GGTAATCATTTTTAATGTTATTACTATTTAATTAAATTAGTGTTTGTGTTAGTATTAACATGTTGCCTATTTTCTTCGTA GTCACATAATGACGCTAAGAGGTTTCGATTTAAGGTGATTGCTAATTGGGATGACATTGTAGAATTGTGTGCTAAAGATA GAGCAACAGGAATTGGAGCGGAGACATCCTTGGATGCAGATGACATCATGAGCAAAGAAGCAAATGAGGATGGAGCTTAT ATTGTGGATATTGATGCTGATGAACAAAGCTCTACAACAAAGAAAAGCAAACAACCAATGGAATTCAAAAAGGGAAAAAG TGGAGAGAAGAATGGGATAATTACTTCAATGAATAAAGTGGCTGAGTCATTGAGTGAATTTGTGCAAGCAACTAGAAAAG GGGTGAAAAATGTCCAAGAAGTGGTTCATGATGTGATGGATGAGCTAAAGAACATTCCGGACCTTAATGGCACTCAATGG CTAAAAGCAGTGGATTGGCTTTCAGAAAATCCAAATAAGTTGGAGATTTTGAAAGCTCTTCCCATGGAGAGAAAGAAAGA TTACATCTTAGCTTTTATGCACTGATTCGTGATTTGCTATAGTTTATGGACTCATTTGTAGTGTTTCCAACTTTTCATTA TGCCACTGTTGAGACTTTGTTTTATTTATTTTTCATTTGGATTGATGTTAGCACTTGTTATAAACACAGTTTGAAATTTA AATAATAGAAAATGTGATATCTCGATGAATGTTTGTT
CDS sequence (LotjaGi2g1v0001900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGGAAAAAGGAAAATGGCGGAAGCTAGTAATGAGGATAAGAAAGATGATAGCAGCGCTTACTTTACTTGGAACTT GGAGATGGACCGTGCACTTGCTGATATACGTAGAGATCAAAGAAGCATGGGAAACAAGAGTGATGGTGCATGGAAAGCAG TGGCATATAACACTGCGGCTCAAATGTTGTCTTCACGCTTCAATTTGCAGTTTATTGGAGAGAATGTTAAAAATCGTATC AAGCTGTGGAGATCATGGTATGGCATTGTTAGTGACATCCTTAGTCAAAGTGGTTTTGATTGGGATGGAACCAAATATAT GATTTCTGTTACAAATGAAGATGCATGGAATGGGTATGTTAAGTCACATAATGACGCTAAGAGGTTTCGATTTAAGGTGA TTGCTAATTGGGATGACATTGTAGAATTGTGTGCTAAAGATAGAGCAACAGGAATTGGAGCGGAGACATCCTTGGATGCA GATGACATCATGAGCAAAGAAGCAAATGAGGATGGAGCTTATATTGTGGATATTGATGCTGATGAACAAAGCTCTACAAC AAAGAAAAGCAAACAACCAATGGAATTCAAAAAGGGAAAAAGTGGAGAGAAGAATGGGATAATTACTTCAATGAATAAAG TGGCTGAGTCATTGAGTGAATTTGTGCAAGCAACTAGAAAAGGGGTGAAAAATGTCCAAGAAGTGGTTCATGATGTGATG GATGAGCTAAAGAACATTCCGGACCTTAATGGCACTCAATGGCTAAAAGCAGTGGATTGGCTTTCAGAAAATCCAAATAA GTTGGAGATTTTGAAAGCTCTTCCCATGGAGAGAAAGAAAGATTACATCTTAGCTTTTATGCACTGA
Protein sequence (LotjaGi2g1v0001900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGKRKMAEASNEDKKDDSSAYFTWNLEMDRALADIRRDQRSMGNKSDGAWKAVAYNTAAQMLSSRFNLQFIGENVKNRI KLWRSWYGIVSDILSQSGFDWDGTKYMISVTNEDAWNGYVKSHNDAKRFRFKVIANWDDIVELCAKDRATGIGAETSLDA DDIMSKEANEDGAYIVDIDADEQSSTTKKSKQPMEFKKGKSGEKNGIITSMNKVAESLSEFVQATRKGVKNVQEVVHDVM DELKNIPDLNGTQWLKAVDWLSENPNKLEILKALPMERKKDYILAFMH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 24 | 119 | 96 | 1.0E-13 | ||
| PANTHER | 29 | 283 | 255 | 1.7E-100 | – | |
| PANTHER | 29 | 283 | 255 | 1.7E-100 | – | |
| MobiDBLite | 182 | 202 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0001900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…