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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0008900 |
| Transcript ID | LotjaGi2g1v0008900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT3G19000.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9FFF6|DIOX5_ARATH Probable 2-oxoglutarate-dependent dioxygenase At5g05600; TrEMBL-Plants: tr|A0A072VG19|A0A072VG19_MEDTR Gibberellin 2-beta-dioxygenase; Found in the gene: LotjaGi2g1v0008900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:3018512..3026449) extracted from Lotus japonicus Gifu genome v1.2.
TCAGCCACCAAGTAATGACAAAAAAACAAGTGTCTAATTAATTTCATTTTCTATATAATGATTGGATCCCAACACCAACA AGACACAGCCTATACAACTCTAGCTTCCAAATTTAATTTGTTACTGTCACTGATTTCATTTCTCAAGAAATTCCATAACA ATGGGAGAGATTGATCCAGCTTTCGTTCAGGCACCAGAGCACAGACCCAAGCTCAGTGTCATAGAAGCTGAAGGAATCCC TGTGATTGACATGTCCCCTCTGTTATCATCAGATGATGCAATTTCCAACACAGACCCTTCAGCCATTGAAGAGCTTGTGA GGCAAGTGGGCAGTGCATGCAAGGAGTGGGGGTTCTTCCAGGTGATCAATCATGGAGCTCCTCTTGAGAGCAAGCAGAGG ATTGAATCAGTTGGGAAAAAATTCTTTGCTCAGAACTTGGAGGAGAAGAAGAAAGTGAGGAGGGATATTGTGAAGGTGAT GGGATATTATGAGACTGAGCATACCAAAAATGTTAGGGATTGGAAGGAAGTGTTTGATTTTACTATGGAGGAACCCACCT TGATCCCAGCTTCAATTGACCCTGATGACAAGGAGATCACTGAGTGGTACAATCAGTGGCCAGAGTTCCCCCCAGAGATG AGGTAATTTAATTTGATGAGTATAATCCATAACATCTCCCTTTGAATTTCAACCCTGCACAAATTGGGCCCGACAAACTA ATAGCATGTTTTTTTTTTTTTTGAAAAGCCAAACTAATAGCAAGTTATATGTTTCCAGAATCAATGATAACACTCAAAAA GTACTAAAAGTTATAAAACCAAAATCAATCAATAATATAATTGAGAAAAGTTTCTCTGAATAAATTTTAGGTGAAATTGA TTCTGAATATTAATTAATCCAAATATGCTTAAACGTTTCCACATATATAATTTTGACTTTAAAATCAATTACAAGGTTTC CAAACTTGTAGTAAGCTCAATTGCACTCATTCAATTTAGAAAATGTTAATTACGAGAAGATTTAAAAATTCTAGCCACTA CAAAAGTATTGTAATATTTTATGAGGAAAGTGGTATTTGTCAAATTTTGAATATAACTATTCTATATTTACTCAATATTG AATTTTCATTATTGGAGCTTGATAAAATTGGCGCTCATGTGGGTAGTTATGATGGAATTGGGTGAGGGGTGGATCTTGGG AGGAGAGTGTTTTTTTTTGTTCTATCGAAAAACTAACAATAAAGAAACAATTACAACGAGATCAAGCGATTCCTCAAGAT TAGGATTTCTAAGTCCCAAGGGGGAGTCTCAATCACGCACCAAGGATTCAAAGGAGAAGACGCTACTCTCTTCGCCAACC AATCCGCCGGTTCATTACATTCTCTAGAAATGTTATCCAAATTAACCCTCCAACTCCTTTGCAAGAGTTGCTGAATGGTC CTCAAAGTTGGCATAAGTAGATGAGAAAATCAATTTTTCTAGAATAAATAAGGTTTTTTTCACATTAAAATTCTTCAAAT TTGGTTTTAGTCTATCAAGAGATGTCTCTCATCACATAATCTTCTTGGCATATGGTGTAGCATACAACGTAGGCGCTCAA ATGCGAGTATTTTGCTTGAGCTTACATTTAGACAATGACTAAAATAAAACAATTCTCTAATAGTGTAAACTGTAAACTAA AATGCAACTTTGCTTCCGCTAGTAACTAAATTTTATTGACCTAAAAATTAGAGAGATCACAAATATATTTAACTTATTTT TAGAGTTTAATTGATATACATCGTCAGTGTAAAATAGTTTTACACTAACAATCAATTACAGTATGACATGTGAGAGAATC TATTACATTTACTTTAAATTTTAATTAGAGAAAAAGGATGATCCACCGACGGTGTAAAGTTTTTTTACACTGTCAAACAA TCAAATTTCAAGGATGTGCCACCTCAACTAATGAAATAAAATAAAAATAGAGATTTTCTCACATTCTTGAAATCTGATTG GTTGATGGTGTAAAAAACTTTACACTATCAGTGCATAGAAATTAAACTCTTTTAATTAATACAAAAATATACTTTCTGAT TTAGCGGATATCAATTGGTTGTCTGTGTGAATAAACTTTACATTGTTAGTGTATATTCATTTAACTCTTTTATCGGAAAA CCATATTTAACTAATATTTTTTATAAGCGCCAATTTAATTAATTATTTAAATATTCTAAGTTTATTAGGCCTATAAATAC TGTTTTTATGCCATAACAATTAGAAAATTAAATACTTTCACTCCCTTGTTAAAAGTCATTTTTTCTATATATCTTTTGTC CTAGAAAAGAAATTACTTTACAATATCTATTAAGCTTTAATTTTTGTTTTCATGTTTACTTTTATATTTAATATTTAATA CTCTACATTGAAATAATTTTTCTACTTTCCAAAATTTTAGATAAAGGAATGTAAATATGGAGAGAGAATTTTAATATAGG GAAAATTTTTTTGAACTCAATATAGGGAAATTTAGGAAAGTTATTAAATAACCAAAAATAATTACTACTAAATTTACGGA GTATTAACTAATCTTAATTATTTTTTATAATCTTAAAAAATTACACTTAGAATGGAGAGAGAATTTTAATTTAACGAAAT TTAGGAAAGTTATTAAATAACGAAAACAAATTACTACCAAATTTACAGAGTATTAACTAATCTTAATTATTTTTTTTAAT TTTAATAAATTAAATAAAAGTGACTTATAATAAGGACGAAGAGAATTTTTTTTTTGGTACATAGGAAAATTAAAAACAAG AACTACAAAGCAACTAAATCCTTCTGGAGAAGAGGCACTACTTCCTCAGGAGGAGAATCTAAATCCATTGCAGCACACTG AAGCCTGGCACCAATACCCGCTAGACAGTCTGCTGGAGCATTTCCCTCTCGCTGAACATGACCAATTTTAACATCCCAAT TCCTAGAGAGAAGCAAAAGGATATCCATTAACACAGTACTATACCGATGAAACTCCGCGCCACGCTTCTCGATTGCACGA ACCATCTCCAAACAATCTGATCCACAAACAACTTTCCGCCAATTCTTCTTCCAAACATATCGCAATCCCGTTGCCAGTGC TTTCATTTCTGCATACAGAGGGTCTCCTCCATTACTCCCAACATAAAAACCTCCTAGCCACAAGCCTGCAGAATCACGCA CAAGGCCTCCCACTCCCATACAACCACTAACCGCACTATAGGAGCCATCCACCATGAGCGAAACACACCCCCTGGTGGCG GTGTAAGGACGAAGAGAATGATCAGTCACAAAACATATTGGAGAAATTAAATATAAAATTAAAAAATCCAAGATTTATTG TATTTACATCGTAAATGTAAAAATCCTTACACTTCTTGTTTTTTTTTTTTACAACATAAACTCATATATATTATTGATTA GCCATAAATCCGGCAAAAACAGAACCAACATCTGATCAAAACCTGCTCCTCCAGAGTTTACAAACCCCACCTAATGATCA CAAAGAAACTTTGACACTTCTTGTTATTTGTCATGTTAGAATATAAATTTTTAATTTAATTAAGGTAATAAACTATGTAA CTCATTAATTTTTTTTTGGTACATCAAAAGATAGATAACTAGTTAAACTGATATAGTATGAAAGATCAAATGTCCATGTA GTTCATCAAAATTAAGCAAATAAACAGCTAAAAAAATTAGAGATTAATTTCTATGCACCGACGGTGTAAAAAGTTTTACA CCATCATTCAATCACAACCTTCCATTTCCTATTTTTAGATATTCCTAAATTCAAAATTAATTGTAAGCTAACAAAATGGA GGAATGTGATTGAATGATGGTGTAAAACTTATTTACACCGTCGGTGCATAGAAATTAATCTCAAAAAATTATTAAATTTT TGTGCACTGTTACTGTAAACTTATTTACAGTGTCATTCAATTGAATTCTACTAGATGAAAGAATATTTTTGTTTTAATTA AAGTTTAAAAAGAAAGATATTATTCCTCCTACATTATTGCATGCTTATGATTGGTTTTGAAATGCATACATTAAAGTTTC AAAAGTTTATCAAATGAAATAGAATAAAAAATAACCGCATATTTTAATTTAATAATAATCCTATATTCATCTAAACTAAT AAAATATTTTTTAGAATTTTATGTTAAAAAATGAATAGCAATTATTCCAAAACTCTTGTGCTAAACCAAGAGCCCAACGC AAACACTCCGGAAGAGCTAGGTAGTCTGTTTCAAAACAAACACTCCGGAATCCCAACTCTTGTGCTAAACCAAGAGCCCA ATGCAAAGAGAGAGCTTCCGCCAAAATCGGAGTTAAAACTGGTCCCATCACCATTGTTGCTGAAGCTAAAACTTCTGCAT CCCTATTCCTTGCCACGAATCCAAAGCCTGCCTCATGAGACGGTTGTAGAGAAGCATCAAAATTGATTTTAAAAGTACCT GCCGGCGGACGAGACCAAGTGACGAGACCAAGTTTATTAAAAAAGCTTTAAATTATTTAAATAATCTCTTTTTTAAATAC TTTAAAAAAAATTAAACTAGTTAAATAAGCTTTAAATAAATCAAATAAAGTTTAAGATATTTGAAATGACCTGCCAAACA TAAAGTTAGAAGAAATTGTGGTATTGAATCCATTGAACCAAATTATATATCAATCATTGCTCTCTCTCACGCACACAACA CACATAAAGAGGGTAAATCTAGAAAGATAAGTATCTACGTAAGATAATTCCACTAAATAATTAATATTTAATGTTACCTA TAAAATATTGCATCATTATTGAGCTTTGAGCTTTATGGTGGTAGGTTTTGATTTTGATCTCTTGTACTCATTTGGGAGGG TTTGTCCTGAAGTTTTATCGGTTAATGAATATTATCTTTTGTTGTTAAGACTTAAGTAAAACATGGCATCAAAAGATAAA AAAAAGTCGCCACACACCTAGTGATAGCTAGTTGTACACTTGTACTTTATTATAGAAAGTTAGAAAAAAATAAATAATCT TGTTAATCATTAAGGTTCATGGGCAGTTCTATAACTTCTATCCAATGAACGATGTATTATAAGTATTGGAGAAATTATTT TAACTTATATTATGAACCATAACTTTTATTAGTTTACAATAGACAAAGCTAATACTGAAGGTTAGATATTATTTAAATTT TAGTTTTGTATATAGAAATTTTTTATGTGTTTATTAAAATATTTTCTTTGAAGATTGATTTTTTTTTGAATAACTTTGAA GATTGATTTTAAACATAATAAGAGTATATTATAAGGATTTTGTATTTGACGGTGTAATATTTTTATACATACTCTAATGA TTGATTGTTAAACAAACTTTTAATTTAACTAGAATGTAATTGTTTTGAATATGTGACATTATTGTCACGGTAAAGATATT TTACACCAAAGATATTTGGGGTGTGTTTGTTTCAACTTATTTTTAAAAGAAAAATTTTATTTTTAAATTATACAATTTTT AAGATGTTTGTTTTAACTTTTTAAAAAATCACTATTTTCTCCTTCACTTGGTTTTTATCCCATTGGTTTTTCCTAGTAAG GTTTTAATGAGGCACAATCTCTATACTTGGCCTTTTAAGGGGAAGGTTTGTTGGCTTATGTGGGGCGGTTTGTGTAGTTG TGTCCTACCTAATGAGGGGTTGTCCTCAGGTACTTGTACTTGTCTCATTTCAATAATATCATTTTACTTTCGAAAAAAAA ATCACTCTTTTTTAGAAAAAGATAAAATCATATTATTTAAAAAATATTATTTAAAAAACTATTTTAATTAACTTTTCCGA AAATTCTCTTATAATAGATTTGAGAGAACATAAAAAAATTATATTAATTAGCGTAACTAAGCACAAATCACCTTATATTA AAAAATATCCTTTTTAGACAGTTAAAATTAATTTTTTATTCAGAGACAATCAAAATCTTTCCCATTGTGAGATTTATTGA TCATATTTAAATTTCTGACATTTGATTATATAGAGAGACCTTCCAAGAATATGCTCATCACATGGAAAAGCTAGCACTCA AGTTAATGGAGCTTATTGCCATGAGTTTGGGCCTGCCCCCAAAGCAATTTCATGGGTTCTTCAAGGACCAAACAAGCTGG ATTAGGCTTAACTATTATCCACCATGCCCAAACCCTGACCTTGTTTTAGGGTGTGGTCGTCACAAGGATTCTGGTGCTTT AACGGTTCTAGCCCAAGATGAAGTTCCTGGGTTAGAAGTGAGGAGAAAATCTGATGGTGAATGGGTTCTGGTCAAGCCCT TACCTGATGCTTATATCATCAATGTTGGAGACGTAATTCAGGTACGTCCATTTCATCTACCTCTCCAAATTTTTCGTAAA ATTAAGTTTAGTAAACTTAAATTTATTACAATTAAATTTTATAGTATTGAATTTAAGCCACTAAGTTTGTGTTTGAAAAT GGTATTGGAAAAGTTAGTTTAAAATAAAATATATTTAGATGGCAAGATAAAATTACTTTTAAGATATAAATATAGACGTA CTGTCTTAACGGAATAAGATTTTTTTCAGTATACAAAAGTGTTAGCCACACTCTCTAATTAATTGAAATTTATGTGGATC TCACTAAATTTCAAGTGGGGAACATACCCACATCAATTACAACCAATGAAAGAAAAAGGGTTAAGAAAAGAGTGTTGCTT AGATTTTTCTTTTTTGTACATGTTATTTACAATATAGTTTTTTTATTTATTTGAAAACACAATATAGTTCTTATTCAGTT ATTCTTATTCTTATGATGAGTTAAAATCAATTTGTAATGAAGAAGTTCTTTTAATTTGTGAAACATATCTTTCTGAGTTC ACACGGAGCAGCTTTAATGAGCACCTTCTATCATTATTTGTGTTTGCCGCCTTGCCGGATAAATTCGCACCCATTATGTG TAACATTGGTAGAGATAATTGTTTCCCTCAGGTTTGGTGCAATGACGCATATGAGAGTGTTGAGCATAGAGTGATGCTGA GTGCTGATAAGGCAAGGCTTTCATACCCGTTCTTTCTGTTCCCTGCACACTACACCAATGTGCAGCCTCTGGAGGAGCTT ACAGATGAACAAAACCCTCCCAAATACAGGCCTTACAATTGGGGAAAGTTTTTAGCTACGAGGAAGCGTAGCAACTTCAT GAAACTTGATGTGGAGAACATCCAAATTCATCATTTCAGGATTAATAATTAGATGCGGCATTTTACAATGGTGCTGTGAT GATCAAGAAGCCGGGTCTGGAAAAGGAGCATGAAAATATGAATAAGATGTTGTGTCAACCGATAATTATGTATTATGATC TTAAATAAGGAGCCAGCTCATGGCCTATGAATATTATAATGCCACCTCATGTGAGTTTCTGAAGCCATTTTCCATGAACT CTTATAATGACGGCTATTTATATATAGTTCGCTTTAAAAATATTATTGTGCCATAATGTCTTTATATTTTTAATTTTATT AAGCATTCCTTGTATATTTTTTAATCAATGCCACGAGCAATTTTTTTTGTTAAGCAATAAATAATATAAATAGGCACAAG GGGCGCCACACTCATGGTATACAAAAAGTAAACAAACACAAGAGCCAGAAAAATGAAACACAAGCACATAGGGCTGTCCA ACATGACCTGGACCGAACCGAACCCGCTTAAACCGCGTTTTTTTTTGCAAAACCGGTCCAGTCGGGCCGGAAAACAGGTT TTTCGGTTGAAAAAATCGATTTCTGGTGGTCTGGACCGGTCGGTTCCGATTTGACCACCAAACGACCGAACCAGTTTTAA TAAACTAAAAAAAAACCCAAGCCCACTAACCCTAACCTAATAATATAAATACTCACTATCCTCTCCCAAAATACCCTAGT ATACACATTGAGCCTCCC
CDS sequence (LotjaGi2g1v0008900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGAGATTGATCCAGCTTTCGTTCAGGCACCAGAGCACAGACCCAAGCTCAGTGTCATAGAAGCTGAAGGAATCCC TGTGATTGACATGTCCCCTCTGTTATCATCAGATGATGCAATTTCCAACACAGACCCTTCAGCCATTGAAGAGCTTGTGA GGCAAGTGGGCAGTGCATGCAAGGAGTGGGGGTTCTTCCAGGTGATCAATCATGGAGCTCCTCTTGAGAGCAAGCAGAGG ATTGAATCAGTTGGGAAAAAATTCTTTGCTCAGAACTTGGAGGAGAAGAAGAAAGTGAGGAGGGATATTGTGAAGGTGAT GGGATATTATGAGACTGAGCATACCAAAAATGTTAGGGATTGGAAGGAAGTGTTTGATTTTACTATGGAGGAACCCACCT TGATCCCAGCTTCAATTGACCCTGATGACAAGGAGATCACTGAGTGGTACAATCAGTGGCCAGAGTTCCCCCCAGAGATG AGAGAGACCTTCCAAGAATATGCTCATCACATGGAAAAGCTAGCACTCAAGTTAATGGAGCTTATTGCCATGAGTTTGGG CCTGCCCCCAAAGCAATTTCATGGGTTCTTCAAGGACCAAACAAGCTGGATTAGGCTTAACTATTATCCACCATGCCCAA ACCCTGACCTTGTTTTAGGGTGTGGTCGTCACAAGGATTCTGGTGCTTTAACGGTTCTAGCCCAAGATGAAGTTCCTGGG TTAGAAGTGAGGAGAAAATCTGATGGTGAATGGGTTCTGGTCAAGCCCTTACCTGATGCTTATATCATCAATGTTGGAGA CGTAATTCAGGTTTGGTGCAATGACGCATATGAGAGTGTTGAGCATAGAGTGATGCTGAGTGCTGATAAGGCAAGGCTTT CATACCCGTTCTTTCTGTTCCCTGCACACTACACCAATGTGCAGCCTCTGGAGGAGCTTACAGATGAACAAAACCCTCCC AAATACAGGCCTTACAATTGGGGAAAGTTTTTAGCTACGAGGAAGCGTAGCAACTTCATGAAACTTGATGTGGAGAACAT CCAAATTCATCATTTCAGGATTAATAATTAG
Protein sequence (LotjaGi2g1v0008900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEIDPAFVQAPEHRPKLSVIEAEGIPVIDMSPLLSSDDAISNTDPSAIEELVRQVGSACKEWGFFQVINHGAPLESKQR IESVGKKFFAQNLEEKKKVRRDIVKVMGYYETEHTKNVRDWKEVFDFTMEEPTLIPASIDPDDKEITEWYNQWPEFPPEM RETFQEYAHHMEKLALKLMELIAMSLGLPPKQFHGFFKDQTSWIRLNYYPPCPNPDLVLGCGRHKDSGALTVLAQDEVPG LEVRRKSDGEWVLVKPLPDAYIINVGDVIQVWCNDAYESVEHRVMLSADKARLSYPFFLFPAHYTNVQPLEELTDEQNPP KYRPYNWGKFLATRKRSNFMKLDVENIQIHHFRINN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 340 | 340 | 1.1E-102 | ||
| SUPERFAMILY | 3 | 337 | 335 | 2.06E-102 | – | |
| PANTHER | 8 | 341 | 334 | 9.4E-151 | – | |
| PANTHER | 8 | 341 | 334 | 9.4E-151 | – | |
| Pfam | 26 | 155 | 130 | 3.8E-29 | ||
| PRINTS | 56 | 73 | 18 | 7.4E-10 | – | |
| ProSiteProfiles | 200 | 301 | 102 | 11.816 | ||
| Pfam | 203 | 301 | 99 | 3.6E-23 | ||
| PRINTS | 224 | 245 | 22 | 7.4E-10 | – | |
| PRINTS | 289 | 307 | 19 | 7.4E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0008900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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