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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0010900 |
| Transcript ID | LotjaGi2g1v0010900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|Q9UMN6|KMT2B_HUMAN Histone-lysine N-methyltransferase 2B; TrEMBL-Plants: tr|I3S9N4|I3S9N4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0010900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:3993650..4000848) extracted from Lotus japonicus Gifu genome v1.2.
TGCCAAGTTGAAAACTTGTGAAGCAGGTTTCAGGTTAAGAATAACACATCACCAAAAGTAAAGAAATATTGCATATATTC TCATGTGGGGGCATGGCCTAATATGCCTTAATTATATGTTCCTCTTTCTCTCTTCAAGTGTTGACGTGGGATTCCCATGA ACCAACTCGAGTTACCACCATCAATTGCTTCAACCATAAGCTAAGTTGAATCTACAGCCCAAAAACAATTCAAATAACTT TTCTATGCAACCTCCAGGTTCACCACAATAAAAACCACAATTCCACATCACACCCCGTTCAATCATATCCTAATGATGTA TTCCACAAGCAAGTCTTTCCGGAAAGAAACAAGCATTACCAACACCAAATGCAGTGAGATATCCCATTTCAGCCACCCAA AACACAAGCTCAGGTTTGAATACTCAGAATTCCCTTTCAAATGTGATGGTTGCAAGGAAGTTGGCATAGGCTCACGCTAC AAGTGCTCCTCCATTTGTGACTATGATCTTCACATGCATTGTGCCATTCCTTCCCCTTCTCTGTACCACCCTTTCTACCC GAAATGCTCCTTCCAGTTTCTCTCCAAGCCACCAGGTAGGGACCACACTAGGTCTATAAAAAAATTTGTCAATAGAACAT TAGTGAAATGTTGTATTTGTCTCTCTAAAAATTTTTTATACTTTATCCTCCAATATTTTTCTTAATGTGTTAAATATTTG TTCCTGATACCCATTTTTTCTGGCACTGACCCTGCTGTCAGGTAACATCCCTCGTTACTGCAATGCATGTGAGAAGGGTG TGACAGGCTTCGTATATCACTGCATGACATGCGGTTTTGACCTTCACCCTTGTTGTGCAAAGCTTCCAATGGTGCTTGAT GACGGTGAGATCAAGCTTTACCTCTACAGGAAAGTGAGTTCACCGTGTCATCGTTGTGGACAGAAGGGGCGTAGCTGGAG TTACAGGTCATCATGCAAGAAGTGCAATCTGCATGTGGCGTGTGTGAGGGAGATGATTGTGGAGAGTTGGCACCAGATTT ACATTGGAAGGAGCAAGAGCAATAATGGAATGAAAATGGTGGAGAATGGGATTCCAAGCCTCAAAAATACACTGCAGGCA AGTCATAACAGCAGGATCAAAGGGAAGGTGAGGAAATGCTGTGAGATAGCTGGAATGGCTGTGCAGGTTGTGGTGTCTGC TGTGTTGGGAGATCCAACGGCTCTGATTGCTGGGATTATGGGGTCAGTGATGTCACGGGCTTGATCTGGAACATGATGAA TGGTGACTAATTTGAATAACTCTTCAATAAGGGTGCAGCATTTTATAGATAGGCACAATCAATTAAAACTAAAGATAGTT AATATAATAAAATAACTTTTTATTATTGTTTTAATATACATTTCGTTTTCAAGTGATTGTGTATGTCTACTCATACAAGA ATTGCTCTGGTGATTGCCTCAGTTTGTGTATCATATTAGTTTGTAGAAGATGTGTGTCGGAAAATTGGGTATGTATAGTG GAAGGAATGTGACTCTGTTTTTTCTAATCCTGTGTATTGTTCAACTATCTGTTATGAATATATTCACATGAAAGTTTTGG CTGTGAAACTTTTTTGCAATATGTAGTTTAAAATTTTCTGATAAATGTTAGGCATTATTTGTTACAGATGATTTACTGTT AGCTGGGTTGTTAGTTGGTTAAGCTGAGTTGGTTAGTTTGTTAAGCTGAGTTGGTTAGTTTGTTAGACGGTTGAGGTTAG TATAAAGGGTGTTAACTAATCAATTGTAATCATGTTGAATAGTGAATAAACTTTCTCTCCTTCTCTCTGGTTTCTTTCTC TTTCTCTCTTCATCTCTTCTTCTTCTTCAACCTTCTGTCCTATCATTGGTATCTAGAGCCCTAAGATTCACGGAACCGCC ATGGCTGAAGCAACAAGGTTTCAGAGTTCGATTCGTGAAGCGGAGGAGCGAATCATGGCAGCGATGGATCCTTGCATCGC CCGCCACATGCGTGAACTGGAACTTCGGTTCGAGACGCAATTCAATGGTTTCCAGGAAGCTATGCGTGGAATTGGTTTGC AGGTCACCGACTTGGCTTCTGCACGACGTAGCAGAACACCAGGCGATGGAGATCACAGGATGCCAACTCGCCTCACGAGG TTGGATTTTCCGAAATTCAGCAAGGACGATGTCGATTCTTGGATCGCTAAGTGCGAGAGGTTTTTTGCGTTGGATGGCAC TCCTGAAGGCGAGCGTGTCGCTGTTGCCAGTATCGCCATGGACGAGAGCTCGTTCAGGTGGTTTCAAGGATTGGAGCAAG GTACGGTGGGAAGAGTGACTTGGCCGGAGTTTGCGGCGGCGCTGCGAACACGATTTGGGGTTGAATTTGAGTCGCCGATG GAGGAGCTCAAACGATTGGTGCAACAGGGAAATCTTGAGGAATATCATGAAGCTTTTGACAATCTTGCATGTAGAACAGA GCTTTCTGAGTCGTTGAAGCTTCAGTGTTATCTTGGAGGCCTCAATCCGGAGCTATGTACTGGGGTGAAGATGTTTGGTC CTCGCACTCTGCTGGAAGCAATGAGAATTGCTAAATTGCAAGAGAGAAGTTTGGAATTGTTGCATAAGAAATCTAATTCA GTGACCAAAACCTACAGCAATTGGAGTGAAAGGAAGGGAGTAGCACCTGTAACAGTGGAGAAGAAGGCGATTGAGAGGAA AACTGTTAGGGAAAACAACCAGGAAGGTATTCTGGGCAAGCCAAATTACACATTCCAGAAGAAACTCACTCCTAAGGAGA TGGATGAACATCGTACTCAGAATCTGTGCTTCTTTTGCCATGAAAAGTACACTCCAGGGCATGATTGTCCCCAAAGAAAG AAGTCTCAGGTCTTCTTTATGGCAGTAGATGGTCTTGAGTCAGAAGAGCTTTTGGAGGAGGTGGAACAAGAATCTCGACC TGAGGTAAATGTTCCTAAAGTCTCTCTTAATGCTTTGCATGGTGATTCAATTTCTTTAGATGCTTTGGATGGTGATTCAG AATATCCTATGATGAGATTGACTGGTTGGCTAGGCAAGAAGAGAATTTTTGTGTTGATAGATACAGGAAGTACACACAAT TTTATTAACCAAAAATTATGCCATGAGGGGTTGAGCAAGATTAAGTGTTTGCAACCAGTAAAAATAACAGTGGCAGATGG GGGAATCATACAAGGCACTGGTTGGTGTGAGGGAATTTCATGGAAAATGCAGGGTTACACTTTTACTGATAATGCAATTG CTATTCCTCTAAGTAGTTGTGACCTCATTTTGGGTATGCAATGGCTTAGACAAAGGGGCAAAATATCATGGGATTTTACC AACTTGATTATGGAGTTTGCTATGGGAACAGAGATGGTCAGATTGCAGGCCATGGAGGAAAAAGAGAACAAGTTGGTCAC TGCTGCCAAACTACACCATATGGTTGGGGAAGATAAGTTTAGCTTCCTACTACAGATTCTTCCTTGTTTTCAGGAAGTGG CTTGCTGTACCATCAAGGCCACTGAATCAGGGAATTCTGGACTATCTTCAGAAGGAGGGAATGAGGAGTTGCAGGCTCAT AAAGAAGCAATTTTGCAGGACTACAGTGATGTGTTTGAGGAACCTGCTCAGCTGCCACCTTTTAGGGGCATTCATGATCA TAAGATCATCCTTAAAGAGGGGTCAAATCCTGTCTCTCTCAGGCCATATAGATATCCCCCTGCACAGAAAGATGTCATTG ACAAAATGGTGAAGGAACTGCTGGAATCAGGGGTCATTCAGCCTAGCTCTTCTCCTTTTGCCTCACCAATTGTCTTGGTC AAAAAGAAGGATGGAAGTTGGAGGATGTGTGTAGATTACAGAAAACTTAATGACATGACTGTGAAGGCAAAGTTCCCAAT CCCATTGGTGGAATATTTATTGGATGAACTGGGTGGAGCTAAAATTTTTTCTAAGCTGGACCTAAGAGCTGGCTATCATC AATTGAGGATGAGGCCTGAGGATGTGGAAAAAACAGCTTTCCAAACACATTCAGGGCAATATGAGTATGTTGTTATGCCC TTTGGACTCACAAATGCTCCTTCAACGTTCCAAGGAGCTATGAATGCTATCTTTGCTCCATTTCTAAGAAAGAGTGTGCT CATATTTTTTGATGATATCTTAGTGTATAGTGCTACAGTTGAGGCTCATTTGCAGCATCTAAGAGAGGTGTTTGCTGTCC TTAGGAAGCATTCCTTTTATGTCAAAAGGAGCAAATGTGCTTTCTTTACTCCTGTGATTGAGTACTTAGGCCATTTTATT TCAGCTTCAGGGGTTTCTACAGATTCCACAAAGATCAAAGCTATTCAGGATTGGCCAGAACCTGTGACTATTAAGCAGCT GCGAGGGTTTTTAGGGCTTACAGGCTACTATAGAAGATTTATCAAAGGGTATAGCATTCTGGCTTCCCCATTGACAGATC TTTTGAGGAAAGATGGTTTCCATTGGTCAGCTGCAGCATCAGCAGCTTTTCTCCAGCTCAAAAATGCTTTGGTCCAAGCT CCTGTGCTTGCTATTCCAGATTTGCAGAAGCCTTTTACAGTGGAAACTGATGCTTCTAGTACTGGAATTGGTGCTGTTCT TCTACAGGACAAGCATCCCGTGGCCTTTATTAGTAAGGTCCTATCCCCCAGAAATAGACTCTTATCAGTTTATGATAGAG AGCTATTGGCTTTGGTCCATGCAGTTACTAAATGGCACCAGTATTTGGCTATTCAGCAGTTTACTATTCTTACTGATCAG CAAAGTTTGAAGTTTTTGTTGGAGCAGAGATTATCCACACCAGCTCAATACAGATGGGTCACTAAGTTGATGGGCTTGTC TTATGTGATTCAGTACAAAAGGGGTAAAGAGAATGTGGTGGCTGATGCTCTCTCTCGAGCTTCACATGGAGAGTTGTTCC AGCTCTCAGTTTCTTCCATTTCCTCAGAATTATGGGGTTTACTCACTCAAGCTTATGCAGCTGATGAGGCTCTACAGCAG CTCATCTCTCAAGTCCTAGCCCAACCTCAACTGCATGCTCACTATTCTGTAGTGGATGGTTTCTTGTTTAGGAAACATAG GTTGATGATTCCTAATAATTCTCAAGTCAGAACATTGATTTTGGAATGGCTGCATTCTTCTCATCAGGGTGGGCACTCTG GTATAAGGGCTACTGTTGTTCGGATTAAGTCCTTATTTTTCTGGAAGGGACTCAGTAAGGATGTTGCTGATTTTATCCAA AAGTGTGAGACTTGTCTTCGGTGTAAATATGAGAGAGTTGCTAGTCCAGGTTTACTTCAACCACTCCCCATACCTGCTGG CGTTTGGCAGAGCATTGCTATGGACTTTATTGACAAATTGCCTAAGTCTCATGGAAAGGATGCTATCTGGGTTGTCATTG ATAGGTTGAGCAAGTATGCTCACTTCATTCCCCTCACTCATCCTTATACAGCTTCTACTTTGGCTGAGATTTTCATCAAA GAGGTTTATAGGCTTCATGGTGCTCCCTCCAACATTGTCAGTGATAGGGACCCTCTGTTTACCAGTACATTTTGGACTGC TTTCTTACAGCAGCTGGGCATTTCTCAAAGCCTCACCACTGCTTATCACCCACAATCTGATGGTCAGAGTGAGGTTCTGA ATAGGTGTTTAGAACATTACCTTAGAGCCATGACTTGGCAACGACCTAAGGAATGGGTCACCTGGTTGCCACTAGCTGAG TGGTGGTATAACACCACTTATCATTCAGCTATCCAGACTACTCCCTATGAGGTGGTGTATGGTCAGCCACCAGCAATCCA TCTTCCTTATTGTCCTCAGAGCACTATTGTGGAAGCGGTGGACAGGAGCTTTACAGCTAGGGAGCAAATGATTCAGAAGC TTCATGCCAATCTCATGAGGGCTCAAGCCAGAATGAAAATACAGGCTGACAAGCATAGAACAGATAGGGAATTTTCTGTG GGAGATTGGGTTTTGTTGAAACTCCAGCCTTATAGGCAGAGTTCCACTCAACACAGGGCTTCTGAAAAACTATCTCCACG ATTTTTTGGACCCTATCAGGTGCTTCACCGTGTTGGCAAGGTTGCTTACACTCTGGCCCTTCCCCCTGAGTCCAAGATCC ATCCTACATTCCATGTTTCTCTGCTGAAGCCATGCCCTTCACCGGCTATGCCACATGTACCACTTCCTTTAGAGTGGGGT AATTTGGATCAGCCAAAGGCTCCTTTTAAGATCCTCAAGAGACGAATGGTTCAGCGCAGGCACAAGGCAGTCACTGAGGT GCTGGTTCAGTGGCTAGGTGAAATGGAGGAAGAAGCTACTTGGGAGGTTCTGTATAACCTCAAACTGAAGTACCCTACAT TTGATACTACTGTTGTTGTCCCTGAGAATTCTCGGGTTATTCCTTGAGGACAAGGAAATTGTTAAGGGGAGGGATATGTT ACAGATGATTTACTGTTAGCTGGGTTGTTAGTTGGTTAAGCTGAGTTGGTTAGTTTGTTAAGCTGAGTTGGTTAGTTTGT TAGACGGTTGAGGTTAGTATAAAGGGTGTTAACTAATCAATTGTAATCATGTTGAATAGTGAATAAACTTTCTCTCCTTC TCTCTGGTTTCTTTCTCTTTCTCTCTTCATCTCTTCTTCTTCTTCAACCTTCTGTCCTATCATTATTACTTGATATACTA TATTTTCATTTTGTTTTCGGTGTTTCATTTTGGTTTAAAAGAGAAAATGTAACTCAAAGTGTTTTTGATTGAGTGTGTTG AATGGTTTGGTATATGATGAAACTGGTATTATTGATGGTAGAAAACGATTACAGAAGTAGAATCCCTAACCGAGAATCAC TGAGACTCCAAGTCAGAGATCAATTGTACAAGTAATTTGGGGAATTGGGGAAGAACTCGAATCTAGGGTTTGCTATTGAT TCCCAATGAATCAATTCCTGGTTCCACAACCAGTTCCAGTTCTAACTACCAAAGATCCTTCTTCCTCTCTAAGCTTTAGC TATTTATAGTCTATTCTAACATAACTAACTGCCAGCTAACTGCCAGCTGTATATTCTGACTTATTTACAATTAAGTCCCT GAGATACTCCTATTACACAGCTCTGGTCCTCTTCCTAACATACACATGTTTCAGAGATGGCTTAACTCGAGAGCTAACA
CDS sequence (LotjaGi2g1v0010900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTATTCCACAAGCAAGTCTTTCCGGAAAGAAACAAGCATTACCAACACCAAATGCAGTGAGATATCCCATTTCAG CCACCCAAAACACAAGCTCAGGTTTGAATACTCAGAATTCCCTTTCAAATGTGATGGTTGCAAGGAAGTTGGCATAGGCT CACGCTACAAGTGCTCCTCCATTTGTGACTATGATCTTCACATGCATTGTGCCATTCCTTCCCCTTCTCTGTACCACCCT TTCTACCCGAAATGCTCCTTCCAGTTTCTCTCCAAGCCACCAGGTAACATCCCTCGTTACTGCAATGCATGTGAGAAGGG TGTGACAGGCTTCGTATATCACTGCATGACATGCGGTTTTGACCTTCACCCTTGTTGTGCAAAGCTTCCAATGGTGCTTG ATGACGGTGAGATCAAGCTTTACCTCTACAGGAAAGTGAGTTCACCGTGTCATCGTTGTGGACAGAAGGGGCGTAGCTGG AGTTACAGGTCATCATGCAAGAAGTGCAATCTGCATGTGGCGTGTGTGAGGGAGATGATTGTGGAGAGTTGGCACCAGAT TTACATTGGAAGGAGCAAGAGCAATAATGGAATGAAAATGGTGGAGAATGGGATTCCAAGCCTCAAAAATACACTGCAGG CAAGTCATAACAGCAGGATCAAAGGGAAGGTGAGGAAATGCTGTGAGATAGCTGGAATGGCTGTGCAGGTTGTGGTGTCT GCTGTGTTGGGAGATCCAACGGCTCTGATTGCTGGGATTATGGGGTCAGTGATGTCACGGGCTTGA
Protein sequence (LotjaGi2g1v0010900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMYSTSKSFRKETSITNTKCSEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSICDYDLHMHCAIPSPSLYHP FYPKCSFQFLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLDDGEIKLYLYRKVSSPCHRCGQKGRSW SYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMKMVENGIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVS AVLGDPTALIAGIMGSVMSRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 261 | 252 | 3.9E-142 | – | |
| PANTHER | 10 | 261 | 252 | 3.9E-142 | – | |
| Pfam | 26 | 71 | 46 | 1.1E-9 | ||
| Gene3D | 37 | 82 | 46 | 3.9E-5 | ||
| SUPERFAMILY | 51 | 133 | 83 | 5.75E-17 | – | |
| Pfam | 91 | 127 | 37 | 3.8E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0010900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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