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IPR004146 is a DC1.
<p>This entry represents a domain found predominantly in plant proteins, including Probable nucleoredoxin 1 (NRX1) and Protein VACUOLELESS GAMETOPHYTES (VLG) from Arabidopsis thaliana. This region is found at the C- terminal end of NRX1, which is likely to be a thiol-disulfide oxidoreductase required for pollen tube growth and pollen function in the pistil [[cite:PUB00103728], [cite:PUB00099167]. VLG is essential for development of both female (megagametogenesis) and male (microgametogenesis) gametophytes by promoting the formation of large vacuoles early in development, maybe via the regulation of vesicular fusion [[cite:PUB00103727]].</p> <p>This domain, which is rich in cysteines and histidines, is termed DC1 for divergent C1 domain as it has a pattern of conservation that is similar to that found in ([interpro:IPR002219]). It probably binds to two zinc ions and bind to molecules such as diacylglycerol.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Cysteine/Histidine-rich C1 domain family protein [Theobroma cacao] gi|508705322|gb|EOX97218.1| | 6 | ||
| – | PREDICTED: probable nucleoredoxin 1-like [Glycine max] gi|356526803|ref|XP_003532006.1| | 16 | ||
| – | Cysteine/Histidine-rich C1 domain family protein [Theobroma cacao] gi|508707055|gb|EOX98951.1| | 9 | ||
| – | PREDICTED: probable nucleoredoxin 3-like [Glycine max] gi|356515549|ref|XP_003526462.1| | 15 | ||
| – | Nucleoredoxin [Medicago truncatula] gi|357467067|ref|XP_003603818.1| | 13 | ||
| – | Cysteine/histidine-rich C1 domain-containing protein [Arabidopsis thaliana] gi|15226210|ref|NP_180334.1| | 11 | ||
| – | Cysteine/Histidine-rich C1 domain family protein [Theobroma cacao] gi|508705322|gb|EOX97218.1| | 8 | ||
| – | Thioredoxin; TAIR: AT4G31240.1 protein kinase C-like zinc finger protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|A0A0B2Q9C3|A0A0B2Q9C3_GLYSO Putative nucleoredoxin 3; Found in the gene: LotjaGi1g1v0396600 | 13 | ||
| – | Thioredoxin; TAIR: AT4G31240.1 protein kinase C-like zinc finger protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|A0A0B2Q9C3|A0A0B2Q9C3_GLYSO Putative nucleoredoxin 3; Found in the gene: LotjaGi1g1v0396600 | 13 | ||
| – | Thioredoxin; TAIR: AT4G31240.1 protein kinase C-like zinc finger protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|A0A0B2Q9C3|A0A0B2Q9C3_GLYSO Putative nucleoredoxin 3; Found in the gene: LotjaGi1g1v0396600 | 13 | ||
| – | Thioredoxin; TAIR: AT4G31240.1 protein kinase C-like zinc finger protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|A0A0B2Q9C3|A0A0B2Q9C3_GLYSO Putative nucleoredoxin 3; Found in the gene: LotjaGi1g1v0396600 | 13 | ||
| – | Cysteine/Histidine-rich C1 domain family protein; TAIR: AT1G60420.1 DC1 domain-containing protein; Swiss-Prot: sp|Q0JIL1|NRX2_ORYSJ Probable nucleoredoxin 2; TrEMBL-Plants: tr|G7J5V1|G7J5V1_MEDTR Nucleoredoxin, putative; Found in the gene: LotjaGi1g1v0431700 | 13 | ||
| – | Cysteine/Histidine-rich C1 domain family protein; TAIR: AT1G60420.1 DC1 domain-containing protein; Swiss-Prot: sp|Q0JIL1|NRX2_ORYSJ Probable nucleoredoxin 2; TrEMBL-Plants: tr|G7J5V1|G7J5V1_MEDTR Nucleoredoxin, putative; Found in the gene: LotjaGi1g1v0431700 | 13 | ||
| – | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|P11346|KRAF1_DROME Raf homolog serine/threonine-protein kinase phl; TrEMBL-Plants: tr|K7K753|K7K753_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0539800 | 9 | ||
| – | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3; TrEMBL-Plants: tr|G7KVE7|G7KVE7_MEDTR Cysteine/histidine-rich C1 domain protein; Found in the gene: LotjaGi1g1v0726800 | 8 | ||
| – | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|Q9UMN6|KMT2B_HUMAN Histone-lysine N-methyltransferase 2B; TrEMBL-Plants: tr|I3S9N4|I3S9N4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0010900 | 7 | ||
| – | Cysteine/histidine-rich C1 domain protein; TAIR: AT1G20990.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|O80763|NRX1_ARATH Probable nucleoredoxin 1; TrEMBL-Plants: tr|G7IA18|G7IA18_MEDTR Cysteine/histidine-rich C1 domain protein; Found in the gene: LotjaGi2g1v0012900 | 5 | ||
| – | Cysteine/histidine-rich C1 domain protein; TAIR: AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein; Swiss-Prot: sp|Q7Y0E8|NRX11_ORYSJ Probable nucleoredoxin 1-1; TrEMBL-Plants: tr|A0A0L9V791|A0A0L9V791_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0504200 | 9 | ||
| – | Thioredoxin; TAIR: AT1G60420.1 DC1 domain-containing protein; Swiss-Prot: sp|O80763|NRX1_ARATH Probable nucleoredoxin 1; TrEMBL-Plants: tr|I1KXE7|I1KXE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167100 | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd03009 | CDD | 1 | 5.26 |