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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0012800 |
| Transcript ID | LotjaGi2g1v0012800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyltransferase; TAIR: AT1G14590.1 Nucleotide-diphospho-sugar transferase family protein; Swiss-Prot: sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970; TrEMBL-Plants: tr|A0A0S3T101|A0A0S3T101_PHAAN Glycosyltransferase; Found in the gene: LotjaGi2g1v0012800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:4668746..4673608) extracted from Lotus japonicus Gifu genome v1.2.
GCGCCACTCGATCATGACCTCACCGACAACACCAAATGCCGCTCTCACGCCCCCGCACGCTCCCATCCCACGGCGACGAT TCCCGCCGACATCGTTCCGCCACGCCGCTGGTAACTCCGTCGCATCCATGACGCCGGAATCCTCGACCCTCCATCTCAGG CTAACCGTCGCCGCCGCGCTGCTTTTCTCCGCCGTTTCTCTCTCCTGCGTATTCCTCTTCAAAAACGCCGATTACTCTCA CTATTCGACGGTTTTCCCGTTGGCGTCCACCGATTCCGCTGAGGTGAGTTCCGTTTCCGTAACACTTTCTATTTCTAGCC TGGTCTCTTCTCTCTCTCTCTCTCTAGTTGTGTTAGCCAGTGATTTTCCCAATTTTGTTGACCATTGGAATCTAGTGGAA ATCTTGATTTAGAAAGTGTATATTTGTGATGGTATTGAGCTGAATTTTGGTGTTGTTATGCTTGGCTAGATGATTGATTT GAATGTTGAGTCATGAGTGTGAGTTGTTTGAGTGAGTAGAAACACGCATTCATCAATTGAAACTATTGTTAAACCAATTT GATTTTGATATTGTGCATAGCTTCACCAGTGATGCATATATAGTCGGTTTGATAAATTTTTCTATAAGCAGTTATGAAAT AAGTTGAAATGATGTTACAATGATATTCTGTAACTGTATGATAGCAGCAGAGTTCAAATGACTCTGTAAAACCCACCACT CCTTTCTCACTATTTCTATTTATCTGTTCAGTCATTTCCTTTCCGCACAAATTCCTTCAGTAACTGATTTGGTGCTCTCC TGTGAGTAGACCTTCTGCATCGAGCTCCACCAGCGCCGCTAACTTTGTATTCCTCGCCTTGCTCACATGGCCATGCTCCA TGGGTCCCATCACTTCCCTTCTATTTCCTTCTTTAACTCCTTTCGACACACTACTTTTCTACCTCCATTAAAAGCAACCT TGTTCTCAAGGTTGAAGTTGGGATATAGTTGTTGAATAGTAGCAAGACTTCTCACATGGCTTCAGCCAGTCCCATTCATT CCTTCCCACTAATTAGTACCTGAGGCAGAGGCACTTGTGTCTGGCCTCTGAGTATGGTTCTGGTTTGCCAAACAGCACTT GGCTGAATGATAGGCCCATAGTCAACGAGGGTAACTACATATGTTGTCCAAGATTCTCTCCTAGAAACAACTTCAACTGA GAAATGTGAAATACATAGTGTGGATACAGGCTAGGCTGCAATGCCAACTCTGGCAACTATAGGGAATTGAGTACCTCATA CCCAATTTCTGATTTTCCTTCAGTACAACAATGCTTCCCATAAGGTTTCATCTTGACCAAAAGCAGGTCTTCTTTCTATC TACTTGAGCTTTCATAAACTGCTGAGCCTTATGAAGATGTACTTTGAGTGGGCTAAGTAGTGCATCCCTCTGCTGCAGTG TCTGATGGAATGTTACTGTTTGGGTGATCAGTATTGGTACCACAGTACCTGGTAAGTATTGGAGGATCTTTGCATAGACC ATTTTAAAAGGTGTCATACCTAGTGTAGTGAGGATTCTGAAATGTAAAGTGCCTCAATTGTTGAGTGCCTGAGCTGGACC ATCTTCTTGTGGGTGATAAGCTGAGGACACGGTTAGCGTAGTGCCAGTGCAGTGAAGTTCAAATAAATGCTGTGAAAATT TACTGGTGAGTGGTGGTGAACACCAACAGAGAATTAGCAGAGTTTAATGAGTCTGGAGGTGTAAACTTGCTGAAACAGTA GATGGTCAATAAAAGAGACAAAAGGGAACAAGGAGGAAATTAAGTATGGAGAAGAATGACACTAGAGAAAAATAACTCAT AAAAAACCTATCCCTTTCTCATTTATTCTATTTATCTGGTCACTCCTTTCCTTTCGCAACATATTCCTTCAATAACTGTT TCGGTGCTCTCTTACTTGTAGACCATCTTTTCCCCTTAATATCTGCATCCATCTCCACCTTGGTGCCATAATGCCATGGC CATTCACTTCTATTTTCTGATTTAACTTCTCTAAATATTCTCAATAATGATATTTCTTTAATAGTTTAAATCAATATCTG GGCGTCAACTTTTTCTTACTAGCTTCTGAGCACCTATAAACTTGCCAGGATTTTGACTATCACTTGAGAAAGGTTGATGA CTGGTGAGAAATAGAGCATTTTTTTTTTATTTTACTTTTGGGATTTCTACATGTTGAATAATTGTTTGTAGAGCTGACGA GCAGTTAAAGGTGAAGGCTGGTTCAATTAAGGACAAAACGTAAAAATAAAATGCAATATGATTTGCATGATTAAGTAAAT TGATATACTGATTTTTGTTCTAATTTGCCCATCCCTACTTTGGGTACTCACATGGCTAGTGTTGCTCATGTCATGCCTTT ACTTCCACACAGCCTTGGTATTTAAAAGTAAAGGCAGGTTGCTGCTTTTGAACAATTTTAATTTCTTCATTTGGAAATCT GAGTAAGACTAGGCATTCTAAACTACTTTCTTTATTACTAGATGCATTAATTTAAGTGGTGACTGGTGAGTTCTCAATAC TGCGAAGCTCTTGTAGCATCTGTTAATATTGAATTACTGGGACAGCTCTTCTGAACCAAACAAAATCCCTTCCCCCCCTC CTCTGAACCAAACAAAGTATCTAATAAAAATCTCTCCCCTCCCATCTCCTCATTGGAACCAAACTGATATTTAGTCAGAT TGGGGTAGCCTAACAACACAACATGCTTTTAAAATATGCCCTGGGTCTGCAAAAATGGGAAGGCTAAGTCCAAATGACAG CTCTTTTTGCTTTTGTTGTTTGTTTGTGATTAATTTGTTTATTTGTTCTTTTGGAATTGATTCTTCTGCAGGCTAGCAAT GAATATTCACTTGAAAAAATTCTGAGTGAGGCTGCAATGGAAGACAGAACTGTTATCTTGACCACGTTAAATGAAGCATG GGCAGCACCAAATTCAGTATTTGATCTTTTCCTTGAGAGCTTTAGAATTGGAGATCGTACTCGTAGGCTTTTGAATCATT TGGTAATTATTGCATTGGATCAGAAGGCATTTATACGCTGTCAGGTTATACACTCCTATTGCTTTTTGCTTGTTAGTGAA GGTATTGATTTTCATGAAGAGGCGTACTTTATGACTCCTCGCTACTTGAAGATGATGTGGAGAAGGATTGATTTCCTACG TTCCGTTCTTGAGATGGGGTACAATTTTGTCTTCACAGTATGTATTTCAATCACTAACCTCTTCACATTACCTTGTACGG ATTGTGTAATCTTTAAGATCATGTTAACCCTGGGAAACATTTATCTAAAGCGGTGAAATGGCAAATATCCTTTAAATTTA TCTCATTGTAATCCCAATTAGTAAGATAAGATGAATGAACAATAAATAATTCCATTGCAACAAAATTATAACTAAACATT TTATTTTGCTTTTTTCATTGTATCTTCCTACATTTATTTTCCTGTTCAGAAAAGAGATTTTGTTGAAGAAAAATAAAAAT AAAAATAAAATTCTATATATAAGAAGCTAGTACATTGTGAAGGTGTCTTAATCATACTTGTTTCGTGTTCCTCTTCTAGG ATGTTGACATCATGTGGTTCAGGGACCCTTTTCCACGGTTTCACGCTGATGCAGATTTCCAGATAGCTTGTGATCATTTC ACGGGTAACTTCGATGATGTGGAGAACAGACCCAATGGAGGGTTCAACTTTGTGAAGTCCAATAATAGGTCAATAGAGTT TTACAAATTCTGGTATTCTTCCCAAGAAACCTATCCTGGATACCACGATCAGGATGTCCTCAATTTCATCAAGGTTGACC CTTTCATTGCTGATATAGGGCTGAAGATGAAATTCTTGGATACAGCTAGTTTTGGTGGGATTTGTGAACCAAGTCGAGAT TTAAATCAAGTTTGTACAATGCATGCAAATTGTTGCTATGGTATCGATAGTAAGCTGCATGATCTTAGAATTATGCTTCA GGATTGGAGACATTATTTGACCTTGCCTCCAAGTTTAAAGAGAATGTCAGTTATTTCCTGGAGGGTTCCTCAGAAATGCA GGTTGGTGTGTACTCAAACTTATTCATTCTTATATTTTAATCTTCTCTGCTTTTTTTACCATCCTATTTTCTGCCTTTTT CGTTAATGAGTTCTTATTGAGGTTAATTTCTTCCCAGCCTCGATTCACTCAGGCCCCATGGTTCACCACAGATGAGTGTT CAAGAAGAGTAAAGTTGCAGTTGCATGTGTCAATTCATGTTTGGAACTACAATGGATTCTGAAGGCAGAATCAATTTTGT GAAGAAGCAGCTTGTGTGTCTCATAATTGATTTTGATGAAAAAGAAGTAGATCCCTATTCTAATACATTGATCAGCTGTT CCTCTGGGTTGCTACAGGATGGAAGGTTTTCCTTTTGGGTTAGCTCTACTGCTGTAAAAAATATGAGAATCGTACTTGAT GGAAAGTAACTACAGCTCAAGCAGATAAGTATGAAAAGGAAAATCAATTTTGCTATTGAAGGAAAGTATCTGTGACCGTA CACTCGGGTTAGACTCATGTTTTTTTTTTTTTGATAAGCAGGGTTAGACTCATGTAATTTAAAAGATCTACCACGTTCAA TGCACAATTTATCTGTGCTTACCCCAATTTGATGCAACACTTTTCTAGTGTTTAAAACCGGAACATGATGAAACGGAACG AAATAGGATGCAACGGGAAAATAATATTTGTGAACACCGAGGTTAAGTAAATACTGTAAGGCTCACATGAGTTCTCTCTC CAAGAAGAACATACTCTCTCTGTTCCTGATCTTTTGTTGTTTTAACTTTTGGTCTAAATTCCA
CDS sequence (LotjaGi2g1v0012800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTCACCGACAACACCAAATGCCGCTCTCACGCCCCCGCACGCTCCCATCCCACGGCGACGATTCCCGCCGACATC GTTCCGCCACGCCGCTGGTAACTCCGTCGCATCCATGACGCCGGAATCCTCGACCCTCCATCTCAGGCTAACCGTCGCCG CCGCGCTGCTTTTCTCCGCCGTTTCTCTCTCCTGCGTATTCCTCTTCAAAAACGCCGATTACTCTCACTATTCGACGGTT TTCCCGTTGGCGTCCACCGATTCCGCTGAGGCTAGCAATGAATATTCACTTGAAAAAATTCTGAGTGAGGCTGCAATGGA AGACAGAACTGTTATCTTGACCACGTTAAATGAAGCATGGGCAGCACCAAATTCAGTATTTGATCTTTTCCTTGAGAGCT TTAGAATTGGAGATCGTACTCGTAGGCTTTTGAATCATTTGGTAATTATTGCATTGGATCAGAAGGCATTTATACGCTGT CAGGTTATACACTCCTATTGCTTTTTGCTTGTTAGTGAAGGTATTGATTTTCATGAAGAGGCGTACTTTATGACTCCTCG CTACTTGAAGATGATGTGGAGAAGGATTGATTTCCTACGTTCCGTTCTTGAGATGGGGTACAATTTTGTCTTCACAGATG TTGACATCATGTGGTTCAGGGACCCTTTTCCACGGTTTCACGCTGATGCAGATTTCCAGATAGCTTGTGATCATTTCACG GGTAACTTCGATGATGTGGAGAACAGACCCAATGGAGGGTTCAACTTTGTGAAGTCCAATAATAGGGCTGAAGATGAAAT TCTTGGATACAGCTAG
Protein sequence (LotjaGi2g1v0012800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSPTTPNAALTPPHAPIPRRRFPPTSFRHAAGNSVASMTPESSTLHLRLTVAAALLFSAVSLSCVFLFKNADYSHYSTV FPLASTDSAEASNEYSLEKILSEAAMEDRTVILTTLNEAWAAPNSVFDLFLESFRIGDRTRRLLNHLVIIALDQKAFIRC QVIHSYCFLLVSEGIDFHEEAYFMTPRYLKMMWRRIDFLRSVLEMGYNFVFTDVDIMWFRDPFPRFHADADFQIACDHFT GNFDDVENRPNGGFNFVKSNNRAEDEILGYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | - | – | |
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 42 | 263 | 222 | 2.5E-116 | – | |
| PANTHER | 42 | 263 | 222 | 2.5E-116 | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 48 | 69 | 22 | - | – | |
| Phobius | 70 | 271 | 202 | - | – | |
| Pfam | 143 | 263 | 121 | 4.2E-36 | ||
| Coils | 260 | 271 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0012800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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