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LotjaGi2g1v0013100.1

Overview

Field Value
Gene ID LotjaGi2g1v0013100
Transcript ID LotjaGi2g1v0013100.1
Lotus japonicus genome version Gifu v1.2
Description Proton pump-interactor 1; TAIR: AT1G20970.1 calponin-like domain protein; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|I1KKN0|I1KKN0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0013100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:4753597..4759570) extracted from Lotus japonicus Gifu genome v1.2.

TGGCATTACCTTTCTCTCCTTCCTCTCTTCTCTGTCGGCTATTTATCTGCATCTGAATCTCTCTCTCTGTGTTCCCACCC AAAAACACGCTCATTCCACATTCTCACCAATTCTCTCTCTCTCTCTCTCTCGATCTGCACCTTCGATCCCGTTCCTCTGC ACCCCGCGCTTCATCCGACTCTGCATCTCCGTAAGCCACAATCTCCTCCGCCATTGCCAATTTTCCACCCAAATCAACCT TCTAACCGTTCGATCCGTCCGCGATCCACAAAATTCTCTTCGTTTCAATTGTGATCTCGTTTGCTTTTCTCTTGCAGGAG CCGCAATGACGGAGGAGAATGAGGTCGTGAACGCGCGCGGCGGAGAAATCTCCGACAACGCCATGATCAAATCTGACCAC TGCAATGGCGTTGTCAATGGCAATGTTGACGGTGCCAGTGCCGGCGAGTCTGTCGCCGTTGCGTCGGATCCGGTCGATGG CAATGGTTTGGTGACGGAGGAGCACGTGGTGGAAGGTGAATCTGTTGTGACGGTTACGGTGGGGGAACGTGTAAGCGAGG TGGTTAATGCTAATGCTAATGCTAATAATAGCAAAGTGCTGTCAAACGGTTCAGCAGAGGGAACCGGCGAAACGACAACG CTTGATGTCGTTGCGGGGGAGAGCGAGTCAGGAAGTGCGGATCATGGTCAAAACGGTTCGGGATCTCACGTCGGTGACGA ATCCAAAAGCGTGTTGGATAGGGAACCTGTTGTTCAAAACGGCGTCGTTGCGGACAATGAGATTCGCGGCGATGTTGTTG CTGTTGCGGAGGAGGGAGATGCTGATGTGAGTAAGAGCGATCGCGATGAAGGTGTAGTGGTGGCTGTTCAGAACGGTGTC GTTCAGGAGATCGAGGTTTCTGTTACCGAATCTGACTCTGATAAAACCCTGCAAAGCGAGATTATGGTTGCTGCTGGTGC AGAAGAAGTTCAAAACGGTTTGGCAGATTCAGAACCGATCGAATGCGGCGCGGAGGACAATGAGATTCCTGTTGGTGGCG TTGATGGGGTAGTATCCTCTACTACCACCGTCAAGGAATCTGCCGGCGAAGATGCGCAAAAGGGTTTAGAGAAGGAAAGG GTTGAGTCTGTCTCTGCTGAGGAGAATAAGATTCCTGTTGAAGGCGAATTGGAGAGGTCTGGGGTGGAATCAGCAGGTCA TGAAGTAGTTCATGAATTGGAGAGTGAAGGTAAGCCTTCTGTTGATTTGGATGAGATGAAAAACAATGCAGTGGAGAATG AGGCAGAGCCTTCAATCAATGCAGTGAAGAGTGAAGCTGAGCCTTCTATTGATACCTCTGAGACGAAGAACAATTCTGTG GAGAATGGCGTTGAACCTCCAAACAATGCAGTGGAGAGTGAAGCTGAGCCTTCAATCAAGGCAGTGGAGGGTGAAGCTGA ACCTTCTACTGATGCAGGGGAGAATGAAGCTGAACCTTCAAATTATGCCGCGGGGAGTGAAGCTGAACCTTCAAACAAGG CACTGGAGGGTGATGCTGAACCTTCTAATGATGCAGTGGTGAATGGTGTTGAACCTTCAAACAATCCAGTGGAGGTTGAA GCTGAACCTTCAAGCAAGGCAGATGAGGTTGAAGCTGAACCTTCTAATGATGCAGTGAAGAATGGCGTTGTACCTTCTAA CAATGTAGTGGAGGGTGAAGTTGAACCTTCAAACAAGGCAGTGGTGGGTGAAGCCGGACCTTGTAATGATGCAGTGGAGA ATGGTGTTGAACCTTCAAACAGTGCAGTGGAGAGCCAAGCTGAACCTTCAAACAATTCAGTAGAGGGTGAAGCTGAACCT TCAAACAATGCAGTGCAGGGTGAAGCTGAACCTTCTAATGATGCACCAGAGGAGATTGAAGCTGAACCTTCAAAGAGTGC AGGGGAGAATGAAGCTGACCCTTCTAATGATGCCGTGAAGGGTGAAGCTGAACTTTCAAACGATCTAGTGCGGAACGAAG TTGAACCATCAAGCAATACAGTGGAGAAGGAAGGTGAACCTTCAAAAAATACTGCAGAGTTTGAAGCTGGACTTTCAAAC AATGTAGTGCAGAGTGAGGCTGAGCCTTCTGTTGATGTGCCTGATATAGAAGCCAAAGCAGGGGAGAGTGAGGCTGAACC ACCGGTTGAAGGTGAAGCAAGCAATCTTGCAGTTGAAGGCACAAGACCTGTCCAAGAAGGTTCTAACACTGATACTTTGG ATGGGCTGAATATGGGTACTGAGGTAGTGAGAAAGCCATTCTACTATTTGATCAGGCTTCCGAGATATGACGATGACGAG AACATAAAAGAGCAGATAAAAAATGCTCTTGACCAAGTGGATGAGAAGACTAAAATTCGAGATGTAGCTCGAGCTGAAAC CCAGACTAAAAAGGTTAGCAAATCACTGCAGCATACTTTAACGTTATTTAAATGGCAAATGAAGTATACTTTTCTATAAG TTTAAAATCAATATCTGATGTTAGATAATCCTTTTGAATGATAATTTGATCAGGCCATTTGCAAGGAGTATAATCAAGAA GTTAGAGATGCAATATCAGCAGAGAGAGCTGCTCGGGACTTGCTGAAATCCAAACGCCAGGAAATGGATTCAGTTCAATC TATAATAAATAGATTGAACAATGCAATTTCTGTTGGAGATATAGATAGCAAGGTATGCCTTCATATTTTCTTCCGGAGAT ATTTAGAAGGGTTTGATTGTTCTGTCTGTTCTGCTGTTGTTTACCTCTGTAGATATATGATTTTTTTACAGATAAGAAAC ATGGAACACATGATCCAGCATGAAACGCTGCCTTTAAAGGAAGAAAAGCAATTAATCCGCCAAATCAAACAATTGAAGCA GAATCGTGAGGAGCTGTCTGCTAATCTGGCAAAGCAGGATCAATCACATCAGCTAGACGACAAAAACAGTATTGAAGAAC ACTTTAAGGTACCATACTCAGGTTGCCCTTTATTATATTTCCTGAACTAACTACCCAAATGCATCTCCCAGACTCACTAT TTTTTTGTAGAACTATGTTTTCCTTGAAATGATTTCTTTACTTCAACTTTTTCAGCAATCACAGCTTTTGAAGAAGGAAA TGGAATTGCTGAGAACTAATGTTCTGAAGGCTGAAGCAGCAACTAAAGCTGCAAGGAAGAAATATGATGAAGAAAGTAAT AAACTGAGTGAGTTGCTAGCTCAGTTTAAGGCTGCTGATGATGTTCGTCAAGAGGCTTATACTAAATTACATGCTTTGAG AAAACAATTGCATGGCAAGGTTTGATATTTCTTTCCTTTCTGTTTCATTTCATTATTCTCTTTGAGAATTTTTTTTTACA AAAGGTATCTCTTTATTAGAACAGAAAGAAATTAACTAACTCTCTTGGTGTTTTGTTTCAATTATTGAAGCTTGTGAAAC TGCATACTTAGGATAAGGGAGACAATAGATTCATTTAATACTAGCAAATGTCACACATCTTTGTGGATTTAATCCTTAGG CTGTGTTTGGGCAAAATGATTTTGATAGGTCTATTAGACTTAAACTCCTAATAGAAATGTGTATGTTGGTGCAATAATAA GAAGGAAATAACAGATTGTAACTAACTTTTAGTGAACTGAACCTTAACAACTTCAAGTTATGGTACTTGACAGTTATAAA TAGAAGAATCATAGCCTTTGTTATGCAACTTTTGGAAATTAGAATTTGGAGTGAGCTGATTTATTGGGAACCTGAATTCT GTATTGTCATTCTTGAGGAATAAAGGATTTCTATCTTCCATACCAGAATTACGTTGATTCTAGGCTGGATATTTTTTTTT TTCTTCTATTGCTGTTTTTTTTCTTACTGTTATGACCAGTTCTAGCAGATTTATTCTTGTTTTCAAGATTAGCATATGAT CTAGGAGAAAAACTCACTGTAAGAATGTAGTGTCTGAAAACTAATGTTGCAGACCCATTTCAATTATCTGTTCAGCTTAA TTTTTATTTACTTACAAAAATTTATTGGCTGAAGATGTGTTAATGTTGGTATTTTTTCTTGGGTGATTCATTCTGTTCTT GAAGTAAAACATAAGATTCATGTAATGAATTTCTACATGTTAATCACAAATATTTATTTTCACTGATACTGCAGAGCAAA TATTTTTGGGAATACAAAGATGCTGTCACGAAAGGGCACGAACTAGCAGTAGAAGGGAAGAAAGAGGAACTGCAAAGCTT CTGTATTGATCAGGTGATCCTTTTATACTTCACTAGTTTGTAGAGTGATTTTCTTTTCTTTCTTGCACTCTATTATGAGG CCAATAAGCTCGAGTTTAGCACTTACCAATGAGCAATTCAGGTTGAGAGAATAATGGAGCTGTGGAATAAAAATGATGAG TTTAGAAGGGACTACCTCCGGTGCAACACCAGGAGTACTCTGAGGAGACTGCAAACCCCAGATGGCCGGTCACTTGGTCC TGATGAAGTGCCACATGTAATTCCTAGTACCTTCACTGAAAGAGCTATCAAAAGTGATTCTTTGGTGTCGCAGTCAACTC CGCAACAAGAAAAGAAACCAACACCAGCAGAATCTGTTAAATCAAAGGATGAACCTGTTTTGAAGGCTGCGGTACAAAGA ACTGAACCAAGTCAAACAGCTAAAGCTAAAAAGCCTGCAAAACCTGCTCCCTCAGTAGTTGCTGCTCCACGTTGGGGGGA TGAGTCTGATGAAGATACGATAGAAAAACCTGTGAGAACAAAGGAGGAAGAGGAGCAAATCTTAAAGGCTGAAATGGCAA GGAAGGAGGAGGAAGCTGCAAAGTTGAAGGAAATGCGGAGGCTGGAAGAGATTGAGAAAGCCAAGGAGGCACTGCAGAGG AAAAAGCGTAATGCTGAGAAGGCCCAACAAAGAGCTGCCTTGAAGGCACAAAGGGAAGCTGAGCAGAAAGAGAAGGTAAT TAGCATTTATATGGTTTAGTACATGTTTGAAAATCATTTTACAATTGATTCTAAAGACAAATCAATTATGGCGAGAAGCT TATGTGAGCTTGTAGGTGGCAGAATGGGTTCAGAGAAAAAATAAGTTTGACCCATACTTGCTATTTATCTTTTGTTCTTC AACTAAATGGGTGCATATTCCTTGCAGGAAAGGGAAAAGAGAGCAAAGAAGAAGGAAAAAAGAAAGGCAGCTTCTTCTAC TGATGCTCCTGCGGCCAACACAGAACAAGAACCTGCTCCTAGCTCAGAAACTCTATCAAGAACTTCAGAAGAATGTGATC AGATAGAGAAACCAGTGGAGGTAACCAAAAGGTCACTGAAACCATCTCAATTCACAAAGCAGACCAAGGTAAAACCTTTA CCCATGGCGATTCGCAACCGGGGGAAAAGACGACTTCAACCATGGATGTGGGTTGTGATTGCTGTTCTTGCTGTTGTGGC CTTGTTTTTTGTGGGGAATAGCAACTCTTTGAGATCTTCACTACAAAGCTTTGGTTTCTAAAGACACTCCAGAGTAAGAT TGCTTTGATACTAAGCAATCATTAGGTGTTTGCCAGGGGAGGGGGGGTGTTACCCTTACATATTTATTACATACATACGT ATAGAAGCAATTCTTTCGTGGAGTTGAAATTTTTTCCTGCTAGTTTTTGGTCTATAGCCAATATTTTCTTCAAACCAATA TTTGTTACTTTCCGATGGTGATGTGGCTTTGACTGCTGAAATGCTTCTGCTTCCAGTTATGGTAATAAATTTATTGTGAT TGTGCCTGCCTTATTATATTCACTGTTATTTATTTATTGTGACATGAGAGGATCATCATAATTCATAGAAAAGCTACTTT GTACTTTTCCTTTCCTTGTCCCTTTTGTTTTTGTTTGGATACCCAATAACAATGCTGAAATAATGCTTAATTTAGAGGTG AGCATTTTCATTTGTTGCTTAAAAGTATGCTCGGGCTATAACGCATAATTTCAT 

CDS sequence (LotjaGi2g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACGGAGGAGAATGAGGTCGTGAACGCGCGCGGCGGAGAAATCTCCGACAACGCCATGATCAAATCTGACCACTGCAA TGGCGTTGTCAATGGCAATGTTGACGGTGCCAGTGCCGGCGAGTCTGTCGCCGTTGCGTCGGATCCGGTCGATGGCAATG GTTTGGTGACGGAGGAGCACGTGGTGGAAGGTGAATCTGTTGTGACGGTTACGGTGGGGGAACGTGTAAGCGAGGTGGTT AATGCTAATGCTAATGCTAATAATAGCAAAGTGCTGTCAAACGGTTCAGCAGAGGGAACCGGCGAAACGACAACGCTTGA TGTCGTTGCGGGGGAGAGCGAGTCAGGAAGTGCGGATCATGGTCAAAACGGTTCGGGATCTCACGTCGGTGACGAATCCA AAAGCGTGTTGGATAGGGAACCTGTTGTTCAAAACGGCGTCGTTGCGGACAATGAGATTCGCGGCGATGTTGTTGCTGTT GCGGAGGAGGGAGATGCTGATGTGAGTAAGAGCGATCGCGATGAAGGTGTAGTGGTGGCTGTTCAGAACGGTGTCGTTCA GGAGATCGAGGTTTCTGTTACCGAATCTGACTCTGATAAAACCCTGCAAAGCGAGATTATGGTTGCTGCTGGTGCAGAAG AAGTTCAAAACGGTTTGGCAGATTCAGAACCGATCGAATGCGGCGCGGAGGACAATGAGATTCCTGTTGGTGGCGTTGAT GGGGTAGTATCCTCTACTACCACCGTCAAGGAATCTGCCGGCGAAGATGCGCAAAAGGGTTTAGAGAAGGAAAGGGTTGA GTCTGTCTCTGCTGAGGAGAATAAGATTCCTGTTGAAGGCGAATTGGAGAGGTCTGGGGTGGAATCAGCAGGTCATGAAG TAGTTCATGAATTGGAGAGTGAAGGTAAGCCTTCTGTTGATTTGGATGAGATGAAAAACAATGCAGTGGAGAATGAGGCA GAGCCTTCAATCAATGCAGTGAAGAGTGAAGCTGAGCCTTCTATTGATACCTCTGAGACGAAGAACAATTCTGTGGAGAA TGGCGTTGAACCTCCAAACAATGCAGTGGAGAGTGAAGCTGAGCCTTCAATCAAGGCAGTGGAGGGTGAAGCTGAACCTT CTACTGATGCAGGGGAGAATGAAGCTGAACCTTCAAATTATGCCGCGGGGAGTGAAGCTGAACCTTCAAACAAGGCACTG GAGGGTGATGCTGAACCTTCTAATGATGCAGTGGTGAATGGTGTTGAACCTTCAAACAATCCAGTGGAGGTTGAAGCTGA ACCTTCAAGCAAGGCAGATGAGGTTGAAGCTGAACCTTCTAATGATGCAGTGAAGAATGGCGTTGTACCTTCTAACAATG TAGTGGAGGGTGAAGTTGAACCTTCAAACAAGGCAGTGGTGGGTGAAGCCGGACCTTGTAATGATGCAGTGGAGAATGGT GTTGAACCTTCAAACAGTGCAGTGGAGAGCCAAGCTGAACCTTCAAACAATTCAGTAGAGGGTGAAGCTGAACCTTCAAA CAATGCAGTGCAGGGTGAAGCTGAACCTTCTAATGATGCACCAGAGGAGATTGAAGCTGAACCTTCAAAGAGTGCAGGGG AGAATGAAGCTGACCCTTCTAATGATGCCGTGAAGGGTGAAGCTGAACTTTCAAACGATCTAGTGCGGAACGAAGTTGAA CCATCAAGCAATACAGTGGAGAAGGAAGGTGAACCTTCAAAAAATACTGCAGAGTTTGAAGCTGGACTTTCAAACAATGT AGTGCAGAGTGAGGCTGAGCCTTCTGTTGATGTGCCTGATATAGAAGCCAAAGCAGGGGAGAGTGAGGCTGAACCACCGG TTGAAGGTGAAGCAAGCAATCTTGCAGTTGAAGGCACAAGACCTGTCCAAGAAGGTTCTAACACTGATACTTTGGATGGG CTGAATATGGGTACTGAGGTAGTGAGAAAGCCATTCTACTATTTGATCAGGCTTCCGAGATATGACGATGACGAGAACAT AAAAGAGCAGATAAAAAATGCTCTTGACCAAGTGGATGAGAAGACTAAAATTCGAGATGTAGCTCGAGCTGAAACCCAGA CTAAAAAGGCCATTTGCAAGGAGTATAATCAAGAAGTTAGAGATGCAATATCAGCAGAGAGAGCTGCTCGGGACTTGCTG AAATCCAAACGCCAGGAAATGGATTCAGTTCAATCTATAATAAATAGATTGAACAATGCAATTTCTGTTGGAGATATAGA TAGCAAGATAAGAAACATGGAACACATGATCCAGCATGAAACGCTGCCTTTAAAGGAAGAAAAGCAATTAATCCGCCAAA TCAAACAATTGAAGCAGAATCGTGAGGAGCTGTCTGCTAATCTGGCAAAGCAGGATCAATCACATCAGCTAGACGACAAA AACAGTATTGAAGAACACTTTAAGCAATCACAGCTTTTGAAGAAGGAAATGGAATTGCTGAGAACTAATGTTCTGAAGGC TGAAGCAGCAACTAAAGCTGCAAGGAAGAAATATGATGAAGAAAGTAATAAACTGAGTGAGTTGCTAGCTCAGTTTAAGG CTGCTGATGATGTTCGTCAAGAGGCTTATACTAAATTACATGCTTTGAGAAAACAATTGCATGGCAAGAGCAAATATTTT TGGGAATACAAAGATGCTGTCACGAAAGGGCACGAACTAGCAGTAGAAGGGAAGAAAGAGGAACTGCAAAGCTTCTGTAT TGATCAGGTTGAGAGAATAATGGAGCTGTGGAATAAAAATGATGAGTTTAGAAGGGACTACCTCCGGTGCAACACCAGGA GTACTCTGAGGAGACTGCAAACCCCAGATGGCCGGTCACTTGGTCCTGATGAAGTGCCACATGTAATTCCTAGTACCTTC ACTGAAAGAGCTATCAAAAGTGATTCTTTGGTGTCGCAGTCAACTCCGCAACAAGAAAAGAAACCAACACCAGCAGAATC TGTTAAATCAAAGGATGAACCTGTTTTGAAGGCTGCGGTACAAAGAACTGAACCAAGTCAAACAGCTAAAGCTAAAAAGC CTGCAAAACCTGCTCCCTCAGTAGTTGCTGCTCCACGTTGGGGGGATGAGTCTGATGAAGATACGATAGAAAAACCTGTG AGAACAAAGGAGGAAGAGGAGCAAATCTTAAAGGCTGAAATGGCAAGGAAGGAGGAGGAAGCTGCAAAGTTGAAGGAAAT GCGGAGGCTGGAAGAGATTGAGAAAGCCAAGGAGGCACTGCAGAGGAAAAAGCGTAATGCTGAGAAGGCCCAACAAAGAG CTGCCTTGAAGGCACAAAGGGAAGCTGAGCAGAAAGAGAAGGAAAGGGAAAAGAGAGCAAAGAAGAAGGAAAAAAGAAAG GCAGCTTCTTCTACTGATGCTCCTGCGGCCAACACAGAACAAGAACCTGCTCCTAGCTCAGAAACTCTATCAAGAACTTC AGAAGAATGTGATCAGATAGAGAAACCAGTGGAGGTAACCAAAAGGTCACTGAAACCATCTCAATTCACAAAGCAGACCA AGGTAAAACCTTTACCCATGGCGATTCGCAACCGGGGGAAAAGACGACTTCAACCATGGATGTGGGTTGTGATTGCTGTT CTTGCTGTTGTGGCCTTGTTTTTTGTGGGGAATAGCAACTCTTTGAGATCTTCACTACAAAGCTTTGGTTTCTAA 

Protein sequence (LotjaGi2g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTEENEVVNARGGEISDNAMIKSDHCNGVVNGNVDGASAGESVAVASDPVDGNGLVTEEHVVEGESVVTVTVGERVSEVV NANANANNSKVLSNGSAEGTGETTTLDVVAGESESGSADHGQNGSGSHVGDESKSVLDREPVVQNGVVADNEIRGDVVAV AEEGDADVSKSDRDEGVVVAVQNGVVQEIEVSVTESDSDKTLQSEIMVAAGAEEVQNGLADSEPIECGAEDNEIPVGGVD GVVSSTTTVKESAGEDAQKGLEKERVESVSAEENKIPVEGELERSGVESAGHEVVHELESEGKPSVDLDEMKNNAVENEA EPSINAVKSEAEPSIDTSETKNNSVENGVEPPNNAVESEAEPSIKAVEGEAEPSTDAGENEAEPSNYAAGSEAEPSNKAL EGDAEPSNDAVVNGVEPSNNPVEVEAEPSSKADEVEAEPSNDAVKNGVVPSNNVVEGEVEPSNKAVVGEAGPCNDAVENG VEPSNSAVESQAEPSNNSVEGEAEPSNNAVQGEAEPSNDAPEEIEAEPSKSAGENEADPSNDAVKGEAELSNDLVRNEVE PSSNTVEKEGEPSKNTAEFEAGLSNNVVQSEAEPSVDVPDIEAKAGESEAEPPVEGEASNLAVEGTRPVQEGSNTDTLDG LNMGTEVVRKPFYYLIRLPRYDDDENIKEQIKNALDQVDEKTKIRDVARAETQTKKAICKEYNQEVRDAISAERAARDLL KSKRQEMDSVQSIINRLNNAISVGDIDSKIRNMEHMIQHETLPLKEEKQLIRQIKQLKQNREELSANLAKQDQSHQLDDK NSIEEHFKQSQLLKKEMELLRTNVLKAEAATKAARKKYDEESNKLSELLAQFKAADDVRQEAYTKLHALRKQLHGKSKYF WEYKDAVTKGHELAVEGKKEELQSFCIDQVERIMELWNKNDEFRRDYLRCNTRSTLRRLQTPDGRSLGPDEVPHVIPSTF TERAIKSDSLVSQSTPQQEKKPTPAESVKSKDEPVLKAAVQRTEPSQTAKAKKPAKPAPSVVAAPRWGDESDEDTIEKPV RTKEEEEQILKAEMARKEEEAAKLKEMRRLEEIEKAKEALQRKKRNAEKAQQRAALKAQREAEQKEKEREKRAKKKEKRK AASSTDAPAANTEQEPAPSSETLSRTSEECDQIEKPVEVTKRSLKPSQFTKQTKVKPLPMAIRNRGKRRLQPWMWVVIAV LAVVALFFVGNSNSLRSSLQSFGF 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1220 1220 8.1E-263
Phobius 1 1191 1191 -
PANTHER 1 1220 1220 8.1E-263
MobiDBLite 112 130 19 -
MobiDBLite 112 148 37 -
MobiDBLite 248 642 395 -
MobiDBLite 255 316 62 -
MobiDBLite 330 351 22 -
MobiDBLite 479 514 36 -
MobiDBLite 578 592 15 -
MobiDBLite 597 611 15 -
MobiDBLite 626 641 16 -
Coils 661 681 21 -
Coils 720 740 21 -
Coils 764 794 31 -
Coils 803 851 49 -
MobiDBLite 962 1054 93 -
MobiDBLite 962 983 22 -
MobiDBLite 984 998 15 -
MobiDBLite 1027 1054 28 -
Coils 1040 1120 81 -
CDD 1041 1104 64 0.00548336
MobiDBLite 1078 1173 96 -
MobiDBLite 1078 1111 34 -
MobiDBLite 1125 1146 22 -
MobiDBLite 1147 1161 15 -
Phobius 1192 1210 19 -
TMHMM 1193 1215 23 -
Phobius 1211 1224 14 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0013100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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