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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0013500 |
| Transcript ID | LotjaGi2g1v0013500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitotic spindle checkpoint protein bubr1; TAIR: AT2G33560.2 BUB1-related (BUB1: budding uninhibited by benzymidazol 1); Swiss-Prot: sp|O22806|BUBR1_ARATH Mitotic spindle checkpoint protein BUBR1; TrEMBL-Plants: tr|I1ND06|I1ND06_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0013500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:4880319..4884847) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGAATCCCTAAATCCAACAACGCTCCCCTCAAATTCCCGTTTCTTTCCCCGAGAAGAAGAAGTCAAAGACGAAGCT TTACAACAATGGCGGAGTGCGAGATCGAGAAGGTGGACGCAGAGACAGCGTTTCTGGCGTCGAAGAGAGAGAGCGGGAAC GAATGGGAGATCTTCAAGGAGAACGTGAGACCACTGAAGAGAGGACGCAACGTCGATCTCCTCAACCACGCTCTCAAGTC CCACACCGATAACAACCTCAAGAAATCGCTCCTTCATCACCGAATGAAACTCCTTCAAGAAATCGATGAATACCAAGGCG AAGACCCTCTTCTCCCATGGCTACAGTAAGCAGCATCTCTTCATAACAACCCACTTTTTTCAATTTATTTTGGAATTAAT CTATAATTTCACACTGAAAATCGTTTTGTATTAACTACTTAACTGCGCAATTTCGATCTATTTGTCGAAAGGTACCATCA ATTTTTTATGTCTTTATGAATTTGTCATTACTTTTTGGTTAGGGTTTATGATTTGTAATGGAATAGCTGACCCGTGTAAC TATAACTGCTAATTGTTGTGTATTTGACATAATAGTGCATGTTTGTGAATCTTTCTCCTATTGATTTTGAAACTATGTTC AATTTGGGGTAGAAAAATCTTGGCTTCTAGGTTTTTTAGAATCGATTCTGATGAAAATCCAAACATGCGAATAGTGAATT TTGAAATTAAAAATGAAGATGTATGGTAGGCAAATTCTTAGGGTTGATTTGTGTATACAACACTAGCAAGAACCAAAGCA CTGTAGATTTATTCTTAGGGATACCAAATTAACTATTAATTTGTGCACTCTCTTGCTTATTGACAGAATGATGAATTTAT GTGAAAGTTTGAGGATTAACTTATGTACACAAAACCTTCAATGTCCTAATTGTGTTTTTTTTTTCATGGTGTTGAAGGTG TATTAAGTGGGTTCAGGAGGCGTTTCCTCCAGGTGGAGACAGTTCGGGGCTGGTTGTGATTTACGAGCAGTGCGTGCGTG CATTTTGGCATTCGGAGCGCTATAAGGATGATCTGCGCTACCTCAAAGTGTGGCTTGAATATGTGGGTTTTTCTTAGTAT ATGTATGGATTGGCGTTCAAAGTCATTTCTCACCCCTTGCATGAATTTCAAAGCGTTAACAGCTATGTATGGATTGGCGT TCAAAGTCATTTCTCACCCCTTGCATGAATTTCAAAGCGTTAACAGTTTGTTGGATTGAAGTTGAATGTATTTTTCCTCA CATTTCTGTTAACTCAACGGTTTTTCAAACACACCCTTAATCTTATCACACTTCTGTTGGTTTGTTTGTTTGTTGATGTT ACTTAATTTACTTGCTTCAATTTATTAAATGTTGTTGCAGGCAGATAATTGCTTCGATAAGGAAGTTATATATGCTTTTC TAGATTCAAATGGAATTGGAAAAACTCATTCCGATTTCTACATTTCTTATGGTTTGCACTTGGAATCTAAGAACAAGATT AAAGCTGCTAACCAGACATTCGAACTTGGCATATCTAGGTATTGACCTCTCATCTCTTGGAGCTTGTGAATGAAATCTTT TCTTGTTTGATGTGTTATTGTGTTAGTTACATATCCCAATTGAATAACTCCATCTTCTCATACTAAATCCTCCTAATAAC TTTAGGAAGTAAGTAAGACTATTGTTTTTGCATTTATTATGTCCTCTGTTCCTGATGTTTTGCATACTGTTTAGGACTTC TATAATTTATATATAACTTGATTCCCTTATTTAAAAGAGAGTCATTTTAAAGAGAGAAAAAATAGTACTTGGTTGAGCAA TTGGTGAGAATTGTGATAGGGTGAGAGAACAGATTAGTATTTGGTTGACTAATTCTGAAATAATTATTACATGAGGGTAT AGATTGTAAACATGAGATAAATGAACTTGGATTCTAAAACAACAGAAGTTTTAGAAAAAATTTGGAAAAACTAAAGCAAC AATAGATTAAGAACGGAGGTAGTGTGGTTGCATATTATAAGTGATTAAGGGGATGTCAGAGGACTTGATAGGACTTACTA CAAGCAAACAATTACTCAAAGTGCATGTCCCCGTGTAATTTCGTTTCATACAAATTTGGAAAGGCGAGAATGTTGTTGCT CTCTCTCTCCTACTTTGGTTTATTTCAAATTTTGATGGTTGAATTTTCCAATGATATTTGTATGCTGCAAGATTTACGGA CTAGCAATTTTGTCATCCCTCATTAGATTGTCATTTTGCAGGAATGCTCAACCCATTGAAAAATTGAAAGCTGCTTATAG AAATTTTTTTGCACGCTCATTGACAAGGCCAAAAACTATAGACGTATGTGGAGTACTAATTAAGTACTTCTTCCAATCTA AACTACTATAACTATGATATGATCTATGATCTATCTAATCTACTATTGTTGTCTAACCCCATATTTTTTCCCTACCTAGG ATTCAATGGAAAAACTAGCACCTGGGCGTAGCTTTGGAACTCTTCTTGCCAAGACAGAGAATCGTGAGTCTTCTGTTCTC TGTTTTTCCTGTATGTTACCTTTTGTCTCAAATCTATTATTTCTGAATGTTTCCCCTGTGTTGCAGGTGCACCGTTGGCC TCATTGAACAGAAATTCTTCTGCTACGAATAATAGGTAACACTGAGAAAGCAATTCACTTATATCTTTGGCTTTATTTAG TCGCAATTGGCTACCTAGTACTGTTCTTCCCTTGTATTTCTTCTTTCGTGGATCCTTATCTACTTTTTTAGTGCCTGTTG GCTTCCCATTTGCGTCATCACACGCATCCATGGAGAAGTAAGATTTTGCCACGTCGGCATTGAGTTCAAAGAAAATCCTA AAAGATACACTGTTTTGTAGACACTCGCACTCCGAGTGGGTGTCTAGAGAGAAATGAATAGAAGACAGATGAGTAGATAT AATGTGATATGATATGAAGAGAGATAGAGAGAAATTGGGTTGTTTGTGGGGTGTCGATACTGTTGGGTGTCCAAAAAGCA GGATTGATATGTTTTTTCTCTAATTGACACTGCATTTATATACTATATACCTAGTTTGTAGAGAAATATATAAAATCATG AGTTTTTCAGAGACATTCAAATTGAACTTGAAATTTTAACTCCAAACTTATGTCAACTTTAAACTCATGTTACATTCCTC CCTAGGCATTCAGAAAGTGAAGGATTTCTCATTTCTTAGAATATCTTCATGAATTTTTTTGATGATACTCCATGTTTTTT CTCTTCATGTAGGACTAGAGGAACTTCACTTTCTATTTATAAAGATTCAGCTGCCACTGGTGAGACCTACTCACAACAGT CAGACATATCACAACCTTGGCACACACTTGGAGCTCGAGCTGAAAGAAATAAGGAAAATAATGCAATTCCCGGCAAATGG AAATCCTTCAAGGTGCTCATTTTCCTCCACATCTTTCTTTTTGTCTGCCCTTCTCATGATTGATCACATTACATCTTAGA ATACTTTACTTTCTCTTTTGGTTTGTGTCCTAAATTTGTTTAACGTCCAATTTACGTAATGATTTCAGATTCCACAGCGA CCTGGGACTATATCCGGAGCTGCTACTGCTAGTGCTATCCCTGTGTTTATTGATGAAGAGTGTCAAGAGTAAGTAGAATC ACTTTCCCAGTACCTTTACATATAGATATCTTTCCCAAATGGCAACCTCCTTTGTACCTTCTCAATTTTGCTCTTATCAC AGTTTGGTAACACCTTAAAAATGGGGTGAAAATCTAATCACTCTTCAACACTTGTTAATATCAATCTAATCCCTTCGTTA ACTTTTCCTCCTCTCAATATTTAGGGTACAAAAAACTCATTCTTGGAATTATCACTAGAAATAAAATTGTTACAAAAGAA CTTCCCCAACTATTAGAGCAAGAGAAAAGCTTACCTTTTCTGTTTGAAAAGAATCTGTTGGGAATGATCCAGAATAGAAT AGATGTCTATCTAGAACATATTGATGAACCTATTACATGTTTTTACAGTTCACAAAGTATGAAAGCAGAGGGTTGTAAGT CCTCAAGTTTGAAGATTAGGCAGGAGGATGACAAAGACTTGAAAAGGTAATCCAGATTCACCTGATAATTAGCTATTTGC TAACAGCAATTATATAAGACCCTTGTAACTTGACACGTGTGCGATTGTTCCCTGCAGTGAAACAGAGCTACTCAGGAAGA ATCCATTGCGCAACTTTCCAAAAAACAGCCTCCCCAGATAATTGAGAAACCTTAGAAAATTAATGCTCATTGCAGCTGTA TGATATCTTTTCTTCAACAATTTGCGGGTCAGCTTTTCCCTAGAAAGCTTGACTCTCACATTTATCTTTGGCTTGTATTT GTATTGGAATTTCGGGTTTGTTTGATTGATTGAAAACTAGTGATTTTTTTTACCCGTGCGTTGCACGGGGAATATGTTTA TTGTATTTGATACATCGATTATATTTTAAATTATAAAAAAATTTAAGAT
CDS sequence (LotjaGi2g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGTGCGAGATCGAGAAGGTGGACGCAGAGACAGCGTTTCTGGCGTCGAAGAGAGAGAGCGGGAACGAATGGGA GATCTTCAAGGAGAACGTGAGACCACTGAAGAGAGGACGCAACGTCGATCTCCTCAACCACGCTCTCAAGTCCCACACCG ATAACAACCTCAAGAAATCGCTCCTTCATCACCGAATGAAACTCCTTCAAGAAATCGATGAATACCAAGGCGAAGACCCT CTTCTCCCATGGCTACAGTGTATTAAGTGGGTTCAGGAGGCGTTTCCTCCAGGTGGAGACAGTTCGGGGCTGGTTGTGAT TTACGAGCAGTGCGTGCGTGCATTTTGGCATTCGGAGCGCTATAAGGATGATCTGCGCTACCTCAAAGTGTGGCTTGAAT ATGCAGATAATTGCTTCGATAAGGAAGTTATATATGCTTTTCTAGATTCAAATGGAATTGGAAAAACTCATTCCGATTTC TACATTTCTTATGGTTTGCACTTGGAATCTAAGAACAAGATTAAAGCTGCTAACCAGACATTCGAACTTGGCATATCTAG GAATGCTCAACCCATTGAAAAATTGAAAGCTGCTTATAGAAATTTTTTTGCACGCTCATTGACAAGGCCAAAAACTATAG ACGATTCAATGGAAAAACTAGCACCTGGGCGTAGCTTTGGAACTCTTCTTGCCAAGACAGAGAATCGTGCACCGTTGGCC TCATTGAACAGAAATTCTTCTGCTACGAATAATAGGACTAGAGGAACTTCACTTTCTATTTATAAAGATTCAGCTGCCAC TGGTGAGACCTACTCACAACAGTCAGACATATCACAACCTTGGCACACACTTGGAGCTCGAGCTGAAAGAAATAAGGAAA ATAATGCAATTCCCGGCAAATGGAAATCCTTCAAGATTCCACAGCGACCTGGGACTATATCCGGAGCTGCTACTGCTAGT GCTATCCCTGTGTTTATTGATGAAGAGTGTCAAGATTCACAAAGTATGAAAGCAGAGGGTTGTAAGTCCTCAAGTTTGAA GATTAGGCAGGAGGATGACAAAGACTTGAAAAGTGAAACAGAGCTACTCAGGAAGAATCCATTGCGCAACTTTCCAAAAA ACAGCCTCCCCAGATAA
Protein sequence (LotjaGi2g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAECEIEKVDAETAFLASKRESGNEWEIFKENVRPLKRGRNVDLLNHALKSHTDNNLKKSLLHHRMKLLQEIDEYQGEDP LLPWLQCIKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKDDLRYLKVWLEYADNCFDKEVIYAFLDSNGIGKTHSDF YISYGLHLESKNKIKAANQTFELGISRNAQPIEKLKAAYRNFFARSLTRPKTIDDSMEKLAPGRSFGTLLAKTENRAPLA SLNRNSSATNNRTRGTSLSIYKDSAATGETYSQQSDISQPWHTLGARAERNKENNAIPGKWKSFKIPQRPGTISGAATAS AIPVFIDEECQDSQSMKAEGCKSSSLKIRQEDDKDLKSETELLRKNPLRNFPKNSLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 367 | 351 | 3.4E-131 | – | |
| PANTHER | 17 | 367 | 351 | 3.4E-131 | ||
| Gene3D | 20 | 206 | 187 | 1.6E-56 | – | |
| SMART | 61 | 185 | 125 | 3.4E-54 | ||
| Pfam | 65 | 185 | 121 | 2.3E-39 | ||
| ProSiteProfiles | 68 | 226 | 159 | 47.031 | ||
| MobiDBLite | 332 | 378 | 47 | - | – | |
| MobiDBLite | 344 | 366 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic spindle assembly checkpoint | A cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. |
Expression pattern of LotjaGi2g1v0013500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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