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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0018100 |
| Transcript ID | LotjaGi2g1v0018100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier family; TAIR: AT2G39970.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier; TrEMBL-Plants: tr|I1NCY8|I1NCY8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0018100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:6327044..6333580) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGTCTTGAATATGTATATTGTGAATAGTCAATATCTTCTATTGGACAGATGTTTGTGAAGTAAACCTCTGATAAAG TGAAGGCCCAGAACAAGAAAAAGAAGAAAGAAAGAAAGAAGGGCGACAACCAGGATCATTATCATGTCAGAGTCAAACGC AATTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATTATCGCTCAAATCATAACTTATCCTCTTCAAGCGGTACCTAATC TTTGTCTTTTTTTATCTTTCATCCTTTGCTTCTCTCTTATGCTCTCTTACCATTTTCAAATTCGCAGGTAAACACGCGCC AGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAACTTTAACACAAGTGCCACTGCTCCTGCTTCTGCTCCAGGCACT CTTTTTCAGATATTTCAGGTGCAAAATTTGGAACCTTTTTGTGTTGGTTTGTTGTTGTGTTTATCAACCTTTGATTGTAT TTTTATACCCTTTTTATTAGGTCATTGGAAATGAGGGCTTGGGTGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGA ACTGCTGCTTCTCAGGTTATAGCTTTTGCTGATTATTCACTTGTTGTAAGATGCAATGTTCTAGGCTTGACTTATGATAT GCTTCCTATTTATTGGGTTGTTGGCTTGCCATCTAAGGGTGTATTTGGGTAAATTGACATTTTTTTAATTTTATTTTTTT GGATAGACAAATGTTAGTTTAGTAATGTTAGTAAATTAGTCCCACTCCCTCCTCAAGGTTCGAACCCTGGACCCTTCACC CTTCACCCTTCATCCTACCCAACCCTTATGTCTCCTAGCTCTTACCACTTTAGCTAACCCTCGGGGACGGGTAAATTGAC AATTAACATGACATGTTCACAAGCTAATTTGTTGAAATAAGCTCAAAATAGCTAACAGGTAGGTGTTAGTGCTTATTCGT AAACTAATCTTAGCAAATTATGAAAATAAGCTCATGATAGCTTATAGGTAGGTCATAAGTTGTTTTTATAATATTTACCC AAACGCTTGCATAAACACTTATGCGATAAGACAAACACGAATAATCTCTTCCAAAGGCAGCCTAAATGCTTATTTTTCTA TGCTGGCAGGGCATTTACTACTACTTCTATCAAGTTTTCAAGAACAAAGCGGTGGCCATTGCTGCTGCTCGGAAAGTCAA AGGGCATGGAGATGGCACTGTTGGAATGTTTGGCTGGCTTGTTGTGGCTGCAATTGCTGGGTGATTACTCCATCATGACA CTTTCATTTAAATGATACATCTCAGAGTACTCATCTCTGTGTTGTGTAAGTTGTGATATCCACTTCCATTTATTTGATTG ATGTTCTTATTGCAATTCTGTTATTCTGCAGGTCCTTGAATGTATTGTGTACAAACCCAATATGGGTTCTAGTGACTCGT ATGCAGGTGCATTCAGATATTTCTGCTTCTTGGACTGTTTTATTTGAAGTTTTACACTTTGTAAAATGTAATTCAGGTTG CGTATAATTTGAAATCATAATGTAGTCTGTGATTATGTTCTGTTCAACTGAACACGTTAATAAATATAAATTGGGATTAA CATTCCTATATTTATTTTGTGACCATTAAGATTCAAATCCTTTGGTTTACATGGATGCACATGTTTTCTTGACATTGCAT GTAAACCTGGGTTATGTTAGGTTCAATATTTTCACATTGAAGCACCCCCAAAAGGGGAACAAACAATCCATAGACTTTTA ATGCTTCAAACTAGCAATGATCCATTTTCAATAATGTTACCTCAGACTATATATCCATGTTTGGTGTCCAATGTCAATTA TGCGTAATATTTCATATTTTGATTCTAGACACACACTCAAGCAGAAAGAAAAATCATGGAGCAAAAGAAAGAAGCATTGA GGAGGGATGCTTCAGAAAGCAGTTTAGCAGGTTCAACATTAGAAGACCAATTGGCTGAACTCAATTCTATAAAACCCCGA CCATATGGAACTATACATGCAGTTGGTGTTTTGCTTCTTTTCTCCACTTTCTTTCTTTGATTACTGCTCATTATTTAGAC TGGTCAGGGAATGAGTGTGGATTTTTTTCCTTCTTTAATTACTAGATTTACTGCTTTAAACAACAAATTTGAATTGCAAG AACTCTCCTGTCGAGTTTTATGTTTAAAATCTCATAAGATTTCAACTTCTTTATTTTGGGGAGTGTTATCGTTTCACATT CTGTAATCTCCATTATCCATGCCTTAACAAAAAATGTGGTTCTGCTTACAGTCATGATTTTTCATGTTGAATTTTATATT TGATACATTGTTAGAAAAGCATAGAGTACTTTTTGGATTCTGATTTAATTTATTTTAATTTAGAAATCTATCTTTATAGT ATCTTTTATATTAGGATGTTATCTCTTATTCTAGTAGTACATCTTCTGTATTTCTTAGGGATTAAGTTATTGATATTAGG ATTAGTTATTATAAATAGGAGTGCCCTCCTTAGGTTAGAGTCATGGATTAAATTATTCAGTTGTAAAGGATTTTCGGGTC CTAACAGATTCACATGGTGCTTCAAAGAAATTTTCATAAGATTGTCATATTTTCCAGTTACATGAGCTTTTTTCACTTTT TTAAGTGCTGATATGAAAGTTTTACTTGATGGAAGGCTAATGAAGTATATAATGAAGCGGGTATTGTTGGATTTTGGAAG GGTGTCTTCCCTGCCCTTATTATGGTCAGCTTCATCATTTGTTCTATTGATATATTCAGTTCTGCTAAACATTCATATAA TCTTTATATAACTGGGGAATTTTCGTTACAGGTTTGCAATCCATCAATCCAGTTTATGATCTATGAGAGTTCATTAAAGC GTCTAAGAGAAAAACGTGCGGCTAAGAAGCAGGGGAGTAGTAGTGTAACCGCTTTGGAGGTATGGAGAACTTTTTAATGC AATTAGTTGAAAACATGTTCCAGGAGAACATTTTAATTTGTTTGATGTCACTTTCTGTATATTTTCCTTTTCTGTGCATC TCAGTAAGCATCCTCTTGTCGTTCAAAAAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCGACTGTCACAACATA TCCCTTGCTAGTTGTCAAGGTAAATTCCGTTATAGTTCCTTCATTTTCTTCTATATTATTGTTTACTATTAAGAAAAACA AAGGACCATGAGTATAGGAAGTCTCTCAACCCCAGTAATTGGTCCACTTTTGTATTAAATGACTTTTCATGTAAACAGTT TCTAGAATGCATAATTTGAATTATCCTTTGGATGGTTGTTTTCATTCATTCCATATAACCAGAGTTTTCTCTCTTCCAGT CTTGATTGCTATAATCTGTATGCAAATGTTTTTAATAATATGTATCTAAGTGGCTATTCTGCACAGTATCCACTCTCTAA CAAATGCACCATTACACACTCTCGTATGGTTTATGACTCGTACTACTACAGTTTTTTCTTTCCATGCAGTCAAGGCTTCA AGCAAAACAGGAGATTGGTGGAAGTAACACATTAAGATACACAGGTTCGCTTTAGATTGATGCAGTACAACTTAACTTGC CTTTGGACTTTTTAAATATTTTTTCATTATAATTCCCATCCTTATCTATATTTGATTGAAAGTGGTCATGTTTTTAATAT TTGTTGTATATTTGATAAGAACCTTGGGGTAACTATACCACAAATTCCAGTTGTTGTGGTTGGAGAGCCCAAAGCCTTAT AAACCCCACATTAGAATCCCATACTTCCAATATGATCTCATACCTTGCAATTTGGTCCTAACAATATAAAAACTGTGGAA TCACTATCATCATTATTTGAACTTCAGTAGTTCCTGTTGTAACTTGTAAGTGGCCTATGTTCCAGCTACATTTAAGTCGA ATAAAAGGGGAGAGAAACTGCCATTTTTTTATAAAAAAATTAATGTATTCTATTTTACTATTTGTTAATTTTCTTAATTG TTTCCTAAAGAGTTTTTTATTTATCATCATGGCAGAGAGATCCTATTGTGAGCAGAATTTAATTGTCCCATCTGTTTTAC TTGATTAATATAGGGTCCACTGATCAATCCCTGTAGGACTAATCAAGCCATTTAGGTTCTCTTCTGTAGGATTCATATTT GAAGCTTTCCATTTTAAAATACTGGGATCCTAATATTTTCCTTTTTTGCATGCTGAAAAATAATGGTATCTTATACTTTG ATTTGACAATATGGTTTACTGCATTATAGAAAACATTGACAATGCTCTTGAGAACCTTTGAGTTATTTTCTGTAATTTTA TGAGAGGATTGATTTACTCACAAAGAAAGTTCTGTCAAATTTACAGCGTGTTTGTATTCATGGATAAACCTGACAGAATC ATTTCTCTCTCCACAAAAGCTACCCCTAGGAGCTTCCTCAAAATCACCACTCCAAACATGAAAAACCTACTAAATTTCTA AACCCACTTACTGACTTAATAACCTTTTGTGAAGTACATATCATAAAAAAGTTTAACTGTTGAATAACGTGACATAGACA AGTTTATGATTTGTTAACAAGATATGAATTTTCTAAGGACTAAGGTTACAAAACTAAGGACATCTGATCCCTTGGTGAAA CCTTGAAATTGAACACTGACAATGAATGATGGATCTATCCATAATTGCCATCCATCTCCCTCCTTTCCATTTCCACCCAG TTTATGTATGTTTGATCCTTTTATTGGCCTACATAGTCATAGTTACATGCAGACTTCTTTCCCTACTAATTATGCTGCAT AAAGTTGGTTTTTATTAGGAAAATCAGGATAGTAAGTGTCTCCAATGATCTTCCATAACCTGATAGTGATCTTCATTCAA TATGATGAATAAGATAACAGTAGATGACAGAAACTATAAGAGAAAATATAGAGAATAATACAATTTTGTACTCCCATGAG CCTATTGTTCTCTGCTTATATACAAGTAAAAGAGAACCAACAGTACTCACATGTGCAGCACATGAGCCAGTATTAACTGT GTAACAAAACACTAACTAACTGAAACTAACTAGCTAACTTTCGATTTCAAAAGTTTTGCTTGACTTTTTGTCTAACTATT TTTCCGTTCCAACTCTACTTTAGTTTGTACTCTGCATGTTTCGCTACAATTATAGTGCACTATATCTTCAACGTTTCTTT GTTTTTGTTTGCGAAAAATATTTGTTCGTTTTAATCTCTTGCTAGTTACTTCAGCATCTTTATGTCTTTCCTTTGCTATC CTGAAACATCGAAACAGAGAAGAAAACAATTATGTTTTTTTTGTCAAAGCATGTTTTCCCCATTTATAATGTGCTATAAA TGCAGGTACTTTTGATGCAATACTTAAAATCATCCGTTATGAAGGATTTCCTGGTTTTTACAAGGGGATGAGCACAAAGA TAGTGCAGAGTGTTTTTGCAGCTTCTGTTTTATTCATGATTAAGGAGGAGCTTGTTAAGGCTTTTATGGTGCTAACTGAT AAGAGCAAGAAAGTTGTATTAAATTTGGGTAGTTGACTTCTTTAACATATGGAAGGGATATCTTTCAGACTGGTTTGCCC ATCCCTATTGGTTATTCACAGCTTTTGGTGAGGGATTGTTAAAGTTTTCACCAAATAATGGATAAAGTTAAGGACATTGC TCTGGTACCCTTTTAAAATGAGAGGGTTTAATACCCTTCTATTGTTTCAAATATTATGAGTAGATTGCAAATTGTAAAAG TTTAATATAGAAGATAGCCTGACATATCAAGAAAAAAATGGTTTGGAACCCCTCCATTTTAAATGAGTATCGGAGAAATT GCCTAAATTTAACTCCACATGTTTTGGACCGGTGTTGTGGAATGCGGATTGCATTGGAAAATGTCACACGATTGGTATTC AAGATATAGGAAACTGTCAACTTCTCAGACATGAAAATGGCTTCTTCCTCACCACTTCACTTCATTCTCGATTTTAATTA CTCTTTCCTAAGTGTTGTTTTAGGCACTATTAAACAAATTATTTTATCGTTCAGATTTCTTCCAAATTTCCTTGACTTTG ATTCGAGGCCAGCCATTCAAAGTGTTGAGTAATGTGCTAAGTGGAATGATTAAGTGAAATGTTGTGACTCGCATTGTGTT TCCACTCCGGAAATGATGAATCATGCGCTCTTGACTTGCACTGTTTTACAACTTTTGTGGTTTCCTTGTAGCCTCAGGAA AATGTTGACCATGCTGCCTCTATGCAGGGTTTTATGTATGAATTTTTATCGGTTGCTGATGTTGATAGTGCAGGTACTCT TTAATCCTTGCTATTTTCCATTTGGGAGGACCAGAACAACATGTTATTTTGTGGTCCAAGCTCTAGGTGAATGAATTTTC CTTTCAGCCAAGACCTCTATAGCAAAACCCTAACGGCTCTAAAAGATAACACAATATTGCATTTTAAGATATAATCTATC TCTAATTCTTTTCAAAATTTAATTAAAGCTTGATTGGGTCCCGGACTCATAGGGTGC
CDS sequence (LotjaGi2g1v0018100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGAGTCAAACGCAATTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATTATCGCTCAAATCATAACTTATCCTCT TCAAGCGGTAAACACGCGCCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAACTTTAACACAAGTGCCACTGCTC CTGCTTCTGCTCCAGGCACTCTTTTTCAGATATTTCAGGTCATTGGAAATGAGGGCTTGGGTGGACTCTACAGTGGCCTC AAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTACTTCTATCAAGTTTTCAAGAACAAAGCGGTGGC CATTGCTGCTGCTCGGAAAGTCAAAGGGCATGGAGATGGCACTGTTGGAATGTTTGGCTGGCTTGTTGTGGCTGCAATTG CTGGGTCCTTGAATGTATTGTGTACAAACCCAATATGGGTTCTAGTGACTCGTATGCAGACACACACTCAAGCAGAAAGA AAAATCATGGAGCAAAAGAAAGAAGCATTGAGGAGGGATGCTTCAGAAAGCAGTTTAGCAGGTTCAACATTAGAAGACCA ATTGGCTGAACTCAATTCTATAAAACCCCGACCATATGGAACTATACATGCAGCTAATGAAGTATATAATGAAGCGGGTA TTGTTGGATTTTGGAAGGGTGTCTTCCCTGCCCTTATTATGGTTTGCAATCCATCAATCCAGTTTATGATCTATGAGAGT TCATTAAAGCGTCTAAGAGAAAAACGTGCGGCTAAGAAGCAGGGGAGTAGTAGTGTAACCGCTTTGGAGGTCTTTTTGGT GGGAGCAATAGCAAAACTTGGAGCGACTGTCACAACATATCCCTTGCTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGG AGATTGGTGGAAGTAACACATTAAGATACACAGGTACTTTTGATGCAATACTTAAAATCATCCGTTATGAAGGATTTCCT GGTTTTTACAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCTTCTGTTTTATTCATGATTAAGGAGGAGCT TGTTAAGGCTTTTATGGTGCTAACTGATAAGAGCAAGAAAGTTGTATTAAATTTGGGTAGTTGA
Protein sequence (LotjaGi2g1v0018100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSESNAIANGLAGAGGGIIAQIITYPLQAVNTRQQTERTLKRNKQNFNTSATAPASAPGTLFQIFQVIGNEGLGGLYSGL KPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGHGDGTVGMFGWLVVAAIAGSLNVLCTNPIWVLVTRMQTHTQAER KIMEQKKEALRRDASESSLAGSTLEDQLAELNSIKPRPYGTIHAANEVYNEAGIVGFWKGVFPALIMVCNPSIQFMIYES SLKRLREKRAAKKQGSSSVTALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGSNTLRYTGTFDAILKIIRYEGFP GFYKGMSTKIVQSVFAASVLFMIKEELVKAFMVLTDKSKKVVLNLGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 121 | 121 | - | – | |
| Gene3D | 2 | 175 | 174 | 7.7E-25 | ||
| Pfam | 4 | 103 | 100 | 5.1E-16 | ||
| PANTHER | 4 | 358 | 355 | 1.5E-141 | – | |
| PANTHER | 4 | 358 | 355 | 1.5E-141 | – | |
| ProSiteProfiles | 4 | 104 | 101 | 19.102 | ||
| SUPERFAMILY | 5 | 346 | 342 | 2.35E-59 | ||
| TMHMM | 5 | 27 | 23 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| ProSiteProfiles | 122 | 244 | 123 | 11.937 | ||
| Pfam | 122 | 246 | 125 | 2.3E-16 | ||
| Phobius | 122 | 146 | 25 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 147 | 216 | 70 | - | – | |
| Gene3D | 182 | 365 | 184 | 5.6E-31 | ||
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 217 | 238 | 22 | - | – | |
| Phobius | 239 | 258 | 20 | - | – | |
| ProSiteProfiles | 259 | 350 | 92 | 24.036 | ||
| Pfam | 259 | 352 | 94 | 1.5E-18 | ||
| Phobius | 259 | 283 | 25 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 284 | 367 | 84 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0018100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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