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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0024900 |
| Transcript ID | LotjaGi2g1v0024900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartyl protease family protein; TAIR: AT3G20015.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2; TrEMBL-Plants: tr|A0A0L9UU82|A0A0L9UU82_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0024900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8607591..8610211) extracted from Lotus japonicus Gifu genome v1.2.
AACTTATTTAATACATATAAATAGAGATATCTAAACTAAAATTTTAACATTCAAAATCATGAAATTTTCTAAATAAGCCG ATCTTGACCCATCACTCACATTAGACAATTCTGTTAAAGCAAGAAATATCAATGTGGTTGAGCTGGCTCTTTTTGAGTTG GGTTTTTATATACTATGTAGTTTGTATTATAACACAGAACAATAAATAAATCTCCCTCCCAATAACCAAAAAAGAATAAT AAAATAAATAAGAAGTTATATATAATTGATAAAAAGTTAAAAAATAAATCAGTCCTCCATCCATCACCACTCATCAGCAA CAAAACAACCATGGACAACATAGACAGAGGCGCACCAATGCTGCTGCTGCTGCTGTCGATCCTTGTAATAATTCTAACCA CTTCCACTTCTTCTGCAGCCACAACGCCATCATCACCTTCTCATTTCTTGGAGTTCAACGTCGACGAAGCAATCGCAGGG ACCAAACTCAAACATGTCCAAGAGGAAGCTGAACCAGAACAACAACAAGAGCAGCTAGAATGGAAAGTGAAGCTCAAGCT ACTTCACAGAGACAAGATCCACCACAGCGTTACCACCATTAGCAACGACCATCGAACCCGTTTCAATGCACGAATCAAGC GAGATGTGAGAAGGGTCGCCTTCCTCCTCCGCCGCCTCAGCAGCAACAACTATGCAGAGGAACTGGCGGAGGCTGCTGCT TTCGGCTCCGACGACGTGGTGTCAGGCACCGCAGAAGGGAGCGGAGAGTATTTCGTCCGGATCGGAGTCGGCAGCCCTCC AACGTATCAGTACATGGTCATCGACTCCGGCAGCGACATTGTGTGGGTCCAGTGCCAGCCCTGCGACCAGTGTTACAACC AAACCGACCCAATTTTCAACCCGGCCCTATCCGCTTCTTTCACCGGAGTCCGATGCCCCTCCGCCGTCTGCGGCCAGCTC GACGGTGCCGCCTGCCACGAGAAGAGGTGCGGCTATGAGGTTTCCTATGGGGACGGGTCCTCCACGAAAGGGACACTCGC CCTGGAGACACTCACGGTGGGGCGGACGGTGATAAGAAAAACCGCCATCGGGTGCGGCCACTGGAATGAGGGAATGTTCG TCGGAGCGGCCGGCTTGTTGGGCCTCGGAGGTGGGCCCATGTCGTTTGTGGGCCAGCTGGGTGCCCAAACTGACGGCGCC TTCGGGTACTGCTTGCTCTCACGAGGTGCAGTACCCGAAGGCTCGTCCGGTTCTCTCCGGTTTGGGCGCCAAGCGATGCC TATTGGCGCCGTGTGGGTCCCTCTCATACCGAACCCTTTTTTTCCAACTTTCTACTACGTTGCCCTTTCGGGTCTTGGAG TCGGAGGCTTGCGCCTCAACATTTCGGAAGATGTTTTTCGGATAACTGACTTGGGCGACGGAGGGGTTGTCATGGACACC GGCACTGCAGTGACAAGGCTACCTGCTGCCGCATACAACATTTTTCGAGATGCTTTTGTTGACCAGACAACGAACTTGCC CCGAGCGTCGCGAGTGTCTATTTTTGACACTTGCTATAACCTAAGCGGGTTCGTGTCGGTTCGGGTCCCCACCGTGTCGT TTTACTTTTCCGGTGGGCAGATCTTGACGCTACCGGCGAGGAACTTTCTCATTCCGGCGGATGACATTGGCACATTCTGT TTTGCGTTTGCTCCATCTCCGTATGGGCTTTCGATCATAGGAAATGTGCAGCAAGAAGGGATCCAAATTTCGGTTGATGC GGGTAATGGTTTTGTGGGGTTTGGACCCAATGTCTGTTAGTAAGTGTTGAGCAAACATTACATTCACTTAATTTTGGTAG TCTAATTAAGCAATGTCACATATTGTATTGATAAATTGATTTATTACGTTACATATGCAGATATGCTGCATGAGGCTGGT GAAAATCTTATTGCTTTTTTCCACTCCATGATCTGCTCTACTAAGCAGTTTTGATGAATCTGGTTTTTGGTTATTCATAG TTATTCCTTTTTTGCTTTCTATAGTATATGTAGTCGTAGTTGAATTTATTGTTTATGTAAAAGGTGCATTCAAAGTACTC CATCCGCCCATAATTATAAGCTAAAATTGTAAAAATCACGCTTATTAAGAAATGTTTAATTGATGCATTGTTTTTGAAAA AAATGTACAACTTTTCATGTTTACCCCTATTTAAGATAGAATTTTTAATTATTATACTATGAATAGTGCTCCACTACCAA TAAATGCAAGGGTAAATATGGAAAGAAATATTAGCTTTTACAACTTTAGCTTATACTCCCTCCGTCCCTAATTATAAGCT AAAGTTAAGACTTATGTTTTGTCACTAAATATAAGTTAAAGTTGTAAAAGCTAATATTTTTTTACATATTTATCCTTGCG TTTATTGGTAGTGGAGCACTATTAGTAGTATAATGATTAAAAAGTGCTATCTTAAATAGGGGTGGTCATGGAAAGTTGTA CCTTTTTTTTGAAAATCAATGCATAAAATAAGACTTTCTTAATAAGCGTGATTTTTACAACTTTACCTTATAATTAGGGA CGGAATGAGTATTTAGTGACAAAACATAAGTCTCAACTTTAACTTATAATTAAGGACGGAG
CDS sequence (LotjaGi2g1v0024900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAACATAGACAGAGGCGCACCAATGCTGCTGCTGCTGCTGTCGATCCTTGTAATAATTCTAACCACTTCCACTTC TTCTGCAGCCACAACGCCATCATCACCTTCTCATTTCTTGGAGTTCAACGTCGACGAAGCAATCGCAGGGACCAAACTCA AACATGTCCAAGAGGAAGCTGAACCAGAACAACAACAAGAGCAGCTAGAATGGAAAGTGAAGCTCAAGCTACTTCACAGA GACAAGATCCACCACAGCGTTACCACCATTAGCAACGACCATCGAACCCGTTTCAATGCACGAATCAAGCGAGATGTGAG AAGGGTCGCCTTCCTCCTCCGCCGCCTCAGCAGCAACAACTATGCAGAGGAACTGGCGGAGGCTGCTGCTTTCGGCTCCG ACGACGTGGTGTCAGGCACCGCAGAAGGGAGCGGAGAGTATTTCGTCCGGATCGGAGTCGGCAGCCCTCCAACGTATCAG TACATGGTCATCGACTCCGGCAGCGACATTGTGTGGGTCCAGTGCCAGCCCTGCGACCAGTGTTACAACCAAACCGACCC AATTTTCAACCCGGCCCTATCCGCTTCTTTCACCGGAGTCCGATGCCCCTCCGCCGTCTGCGGCCAGCTCGACGGTGCCG CCTGCCACGAGAAGAGGTGCGGCTATGAGGTTTCCTATGGGGACGGGTCCTCCACGAAAGGGACACTCGCCCTGGAGACA CTCACGGTGGGGCGGACGGTGATAAGAAAAACCGCCATCGGGTGCGGCCACTGGAATGAGGGAATGTTCGTCGGAGCGGC CGGCTTGTTGGGCCTCGGAGGTGGGCCCATGTCGTTTGTGGGCCAGCTGGGTGCCCAAACTGACGGCGCCTTCGGGTACT GCTTGCTCTCACGAGGTGCAGTACCCGAAGGCTCGTCCGGTTCTCTCCGGTTTGGGCGCCAAGCGATGCCTATTGGCGCC GTGTGGGTCCCTCTCATACCGAACCCTTTTTTTCCAACTTTCTACTACGTTGCCCTTTCGGGTCTTGGAGTCGGAGGCTT GCGCCTCAACATTTCGGAAGATGTTTTTCGGATAACTGACTTGGGCGACGGAGGGGTTGTCATGGACACCGGCACTGCAG TGACAAGGCTACCTGCTGCCGCATACAACATTTTTCGAGATGCTTTTGTTGACCAGACAACGAACTTGCCCCGAGCGTCG CGAGTGTCTATTTTTGACACTTGCTATAACCTAAGCGGGTTCGTGTCGGTTCGGGTCCCCACCGTGTCGTTTTACTTTTC CGGTGGGCAGATCTTGACGCTACCGGCGAGGAACTTTCTCATTCCGGCGGATGACATTGGCACATTCTGTTTTGCGTTTG CTCCATCTCCGTATGGGCTTTCGATCATAGGAAATGTGCAGCAAGAAGGGATCCAAATTTCGGTTGATGCGGGTAATGGT TTTGTGGGGTTTGGACCCAATGTCTGTTAG
Protein sequence (LotjaGi2g1v0024900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNIDRGAPMLLLLLSILVIILTTSTSSAATTPSSPSHFLEFNVDEAIAGTKLKHVQEEAEPEQQQEQLEWKVKLKLLHR DKIHHSVTTISNDHRTRFNARIKRDVRRVAFLLRRLSSNNYAEELAEAAAFGSDDVVSGTAEGSGEYFVRIGVGSPPTYQ YMVIDSGSDIVWVQCQPCDQCYNQTDPIFNPALSASFTGVRCPSAVCGQLDGAACHEKRCGYEVSYGDGSSTKGTLALET LTVGRTVIRKTAIGCGHWNEGMFVGAAGLLGLGGGPMSFVGQLGAQTDGAFGYCLLSRGAVPEGSSGSLRFGRQAMPIGA VWVPLIPNPFFPTFYYVALSGLGVGGLRLNISEDVFRITDLGDGGVVMDTGTAVTRLPAAAYNIFRDAFVDQTTNLPRAS RVSIFDTCYNLSGFVSVRVPTVSFYFSGGQILTLPARNFLIPADDIGTFCFAFAPSPYGLSIIGNVQQEGIQISVDAGNG FVGFGPNVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 29 | 29 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| PANTHER | 15 | 486 | 472 | 4.0E-138 | – | |
| PANTHER | 15 | 486 | 472 | 4.0E-138 | ||
| Phobius | 23 | 29 | 7 | - | – | |
| Phobius | 30 | 489 | 460 | - | – | |
| Gene3D | 133 | 312 | 180 | 6.2E-45 | ||
| SUPERFAMILY | 142 | 489 | 348 | 5.42E-94 | ||
| Pfam | 147 | 312 | 166 | 1.3E-46 | ||
| ProSiteProfiles | 147 | 485 | 339 | 43.366 | ||
| Gene3D | 319 | 489 | 171 | 4.7E-43 | ||
| Pfam | 334 | 485 | 152 | 4.6E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0024900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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