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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0055800 |
| Transcript ID | LotjaGi2g1v0055800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Translation initiation factor eIF-2B subunit delta; TAIR: AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta; TrEMBL-Plants: tr|I1LX09|I1LX09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0055800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:11323253..11330771) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGAGCTCAACTTTCACTCTCACTGTCACAACTCACAAACCCCCTCCATCTCCATCAAATTCTGACAAACCCCTCAA ATTTTCCCGAGAAAAACAAAAAGAAAAACCTCTAAAATTTTCCTGCCACCCAAACAAAACCATAAACCCTAACCTCAATC TTACTATCTCCTCGATGGATCCTTCTCGGCGTGCTCCACGCGCCGCCATCGATCCTGTTCCCAAGATCCGCCAAGTCGGG TTCTTCGCTCCCGGAGCTGCCCCACCCGAACGCTCTCAATCGGGTCCGCCTGACCCGACCCACTCTTCCCCTCCCGTTGT TGGTGCCTCACCATCCCTCTCGCCGGTGATGATTCCGCCGCCGCGTCACCTCTCAGATAACCTCATCCTCCACGCTCGTC CGGTCGCCGCTTCGCAGCTTCGTGCTGACGCTCCGGTGTCCCCGGCGCCGTCGTCTTCGTACTCAAGCAGGATCGCCACT GCCGCCAATGGGAGCTTCTTCGACGGTAGGGGTAGCGGCGCCGGGAAGGTGGTCGCGTCTTCGTTTCCTCGCGGAGGATT TGACTTGACTGCGGTGGTGAAGGTTCCGGCAAGCGAGCTGACCACTGTTTCCGTGGTGAATGACTCGCTTGGACTTCCCG GTGAGCTTCTTCAGCTTGTTTTTTTTTTTTTTGTTGATTTTGATTTTGGTTTCGATTCAGCGTAGCAGTCTATGTCTTAG TATGAATTTGAACTGTTTTCGGATCTGTTGATTTTGATTTTAGTTTCAATCTAATATGGATTTGATTTGAGCTTTATCAA GTGTATGTAGTGTGAGAGTAGAAACTGAAGTGTACGAGATTTGGTTGAGTTTTGCGAAATATGAACTAAATATAAAGTGC GATCAATCATCAATATTTGATATGATCTTGAATTCTTGATAGTGCATAGGATCAAGTTGAGATGTAATTTAACGTGTTTC AAAGTCAGAGAGGAGTCTCTATGGACTTTTGAGTGTGAGAATTTAATTCTAGGCTTAAAAAGAAGGATCTTGTCTTAATT CACCATAATTTATAATTACTAGGACCGGGACAGAATTTTTCTTTCTTATGTTTCTAGATTATGTATTTTTAAATTGAATT TGAATATGTATTTTACATGGTGTTTTAATCTCTGCTTGGATTTCATTTGTGTGTCTGAGCTTGTTGATTTTAACACCATT TGCAATTTGACTGTATGATTGAGAATGTTAAGTTGGCGTGACTTGCTTTTTGTTAATGAATATGTCGATGTCTTTCTATA GAGGAAAATTTAATTGTTTGTCTATTTATCTGGTCTGTTTTTGCGCGTGTTGATTTTAGCACCATTTGCAATTTGACTGT ATGATTGAGAGTTTTAAGTTGGCGTGACTTACTTTTTGTTAATGTATATGTGGATGTTTTTTTATAGAGGGAATTTTAAT TTTGTAGTCTATTTGTCTGGTCTGATTTTATTTTATTTTGGGCTTGATTTTATCACTCTTTTCTTAATCTTTCTTTACTG CCATTAGAAAAAGAAAAAGCAAACAAAGGAGGAGGGTCTGCTGTGGAAGTGAAAGACCAACCTGCTAATTCAAAACAGCA GAAACCGAAACCCTCCAAAGCTGAAAGACGTGCTCTTCAGGAAGCTCAACGAGCTGCAAAAGCTGTGGCAAAAGGTGTGT ATTAGAGTGCTCATGTTTGGTTCGAAACTTTTGTTAGTCTGGCTGTTTGTGACTATGCATTTAAGCTATCTGACTGAACG TTCTTTCATTGTTGGCATATCATCTACAGTTTTATGCTGATTTTATATTGTTATGCCTATTTATACCTAGCTCCTTGTCA GGAATTCTTTTAACTGTTCATGGACTCGAATATTGTGTTTTCTAGTGATCCTATCAGGCCTAAATTGGTAATTTATGATG TTCTTTCAATGGTCTCTTTTCTGCATAACTCATCATGATGATACTAATTAGTTTCCTTTGAATAAAATGTGTCACTAGCT GAAGGAAATAAAGCATCTGGAACTACAACTGTGATGAATGCCAAACCAGCTAAAGCTGTAAAGTCTGCACAGAAAGTTGA TAATGTAACAGTTGCAGCCTCTGAGAAGAAGGGGACTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAAC CACGCATGCAGTATGATGACAAGAGCAGAGTGGAGAAAGCCAAACGCCGTGCTGTGGTGAAACAAACTGAAGCGAAGAAC AGAGTAGAGTTGTTCAGGCACTTACCACAATATGAACACGGGAGTCAGCTTCCAGATCTTGAGGCGAAGTTTTTCCATCT TTATTCTGTACATCCTGCTGTTTACAAGGTACCTATGATATCCTTATTTGATTATTTTATGATTCCTTATTTTTGTTGTT TGATTTATATACTACTGTTTTATTTTTACTTTTTGTTGTGATATATTTGATGTAATGTGTGTTTTCCTGAGTATTGCAAT GCTCAAAGGCACCACGAATCTGATAGGCTGATGATTAAAAAGGCATATGTTAGGAGAAATAGGCATGTCATAGGGGATAA CACCCCACCTAACTGATTATAATTGTAACAGCTTGAGTTGTTAGCATTTTCTGTTATGAGAGGAGAGAGGGTGGGAATAG AGGATATAGAAAATCTGTTAGTATGGTAAGTCAATTTCTTAATTCTCCATTTGAAGGGCATTGGGATGCTATGATTCTCA CACTGAAGTATATTTAAGGAGATCCAAAGAAAAGGTTTAGTTTATTGAAGACAAGGGTCATAGAGTTATAGGATACATAG ATGCAGATTGGGCAGGATCTCCCTCTGATACGAGATCCACCTCTTGGTATTGTGATTTCATTGGTGTTAACTTAATCTCC TGGAAATTAAGAAACAAAGTCTGGTGGCAAGATCAACTCCAGAAGCAAAATATCGAGCCATCAGCCATGACTTCAACTAC TTGTAAGTTGTAAGTTTATATGACTCAAACAATTGCTTCAAGACCTGAGACAGGGGTATGTTTCACAGATGACTCTTATT TAAAACAACCATGCTGCCTTATATATTTCCTTAAATCCAGTTTTCCATGAAGATTGACTGCCATGTTATTAGAGAGAGGG TTTCACATGGAGTTATCAACACTAGATTCGTCAATTCAAATAATCAGTTGGTTGATGTTTTCACTAAGTCTTTGAGAGCT CCTCGAGTTAATTATATTTGTAACAAGCTTGGTGCATATGAAATATAAGCTCCTGTCTGAGTGGGAGTGTTAGATATCTA GAATTTATTATTACTATTATTATTATTAGGTAACAAAATCATGTAAATCATATAAATAGGGAAACTAGGATATCATGAAT TTTGGGTGCCTTATTATATATAACGATCTCTGTTCTGTAGTTTAAACACACTGATTCACCCTAATGTTGTCTCTCGGTCT CACCTAATTTAACACTAACCTTATGAGCACTTGAGCAGTAAGACTAGAGTTAGAGAGGAGGGAAATTTATTATTCCTTTA AGAAACATGAAATTTTAAATCCCTTATTTTGGGTTAGGAAATTACCTATAAAATGTTGTGGTATTTTCAAATTCTGTTAC TTAATGTCCATATAAGTATTCTGCATCAAAGTAATTTATAATCCTCTCAACAAATACATTACATTGTTAAGAATAATTAT CCAAACACACTTAACTTTTAAGTAAAAGAAATCTGCACAAATTGCTAGATGCAATTATCAACTCCATTGGTGGATATTAC TCCATTTTCAAGCATGATATACTATCTGGCAATCTGCAATGTAAGAAGTCGTATCTAATGATATTGAAATAAAAGTAGGG GTTATATATGTTTATAGTCCCTATATGTTTTCAAAAAAAAATGTTTTTAGTCCCTATGATATAGGGGTGAATCTAAATTA ATCCCTAAAACAAATTAAATACCTTTTAGTCCTTATGATGTCCCAAAGTTTACATGACTTTTCGTTTTTGCCAAGTGAGC TACATGGTAATCCTAGTTAGATGAAGGCTGTTCACATGGACTTTTTGTATCAGTTTTAGTCCCTACAATTTTTTTTCATC AACCTTCGTCCCTTCTTTTCCCCTTCCCTCAAACCCTAACCTACCTTCCGCGGCGGAGACCATGGTTCCACCAACCCCCG TCGCCTTCTTTTCCCTCCACGTCGCCTCCCTTTTCCCCCACCTCCTCTGATGGTGTGATAAAGTTGAAAGTGTGGAAGGA CGTAGCAAAGGAATATCAAATTGATTGGTAAAGGGGAGAAGATAAGGTGGGGAGAGAAGATGGCTGCCGCAGCTGTGGAA GGTGGGCATAGGCTAGTGGAAGAGGAAGAAGGGAAAGAGAAGGGGCCGAGGTTGATGAATTTTTTTTGCAAGGACTAAAG CTGATGCAAAAAGTCCATGTGGACAACCTTCATCTTACTAGGAGACCACATGGACTTGTGACTGGACAAAATTAAGCCAT GTAAGCACTGTGACGTCATAATGACTTATTTCAAATAAAAAATTATTTAAGGACCAAAAGCTATGAAAAATTGGGGGATA TTCACCCCTATATTACATGGACTAAAAACATATTTAACCCTAATAGTAAATTGTTTTAAAGGAGTGCTAGCAATACACTT TTGAACACACTCTGCCACACTCATTATGATTGGTTTATTTTTAAAAAACTCATCACATTTGTTATCTTTTAATAAATGAA TAAATCACATGGAGTGTGTTGAAGAATGTGTTCAAAAGAGTGTGTTGCTAGCATTTTTCATTGTATTTAGCATCCTATAT TTGCACGAACATACCACCGTCGTGAGGCAAATAGTGATTATAACTGATTCATGTTGCTCTGGTGTATAGGACAGTGATTA GGAGCTAGGAGCTGGTTCAATATGTTTTCTTCTCAAATCTTATGGATCTTCATTGTGGTTGTCAGGTGGGTTTGCAGTAC CTACTTGGAGATATATCTGGTGGAAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACTT GGTTCCACCCGAGAAGACTCTTGTACGAGACCTAACGGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGAC CCCTGTCAATCAGCATGGGAAATGCAATCAGATATCTCAAAAGTCGAATAGCTAAGCTACCTTTAACTGTATCCGAGTCG GAAGCAAAAACTTCTCTCCAGTCTGATATTGAGCGTTTTATAAGTGAGAAGATCATACTTGCCAACAAGGTGATAGTCAA GCTTGCTGTCACTAAAATAAGAGATGGCGATGTTCTTCTAACTTATGGGTCATCATCAGCAATTGAAATGATTCTTTTGC ACGCACATGAATTAGGAAAACAATTTCGTGTCGTGGTTGTTGACTCTCGTCCAAAGCTAAGAGGGAAACTTTTACTTCGC AAGCTTGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTAGAGT TTTTCTGGGTGCTTCATCAGTCTTGTCTAACGGAACTGTATATTCAAGAGTTGGGACTGCATGTGTTGCAATGGTTGCTC ATGCATTCCGTGTACCTGTCATAGTTTGTTGTGAGGCCTATAAATTTCATGAGAGAGTACAGCTGGATTCAATATGCTCG AATGAACTCGGTATGTATATTTAACATTCATAATCATTCTTTAGTTCACAATTTACCACTGGTCTTTTGGCTTGTGTCTG TAGTAGGCTGATGTTTCTACGATGTTTTTACAGGTGATCCAGATATCATTTCAAATGTGCTGGGTAGAGAGGATGTCAAC TACTTGGATGGTTGGGCTGATATTGAAAATCTGCAACTTTTAAATCTGATGTAAGAATTTACTGATAGAATCAAAGAACA CCACATTGTCATTTCGTCACTCTAACCTTACAACACTTTATATTGATGGCAGTTATGATGCGACTCCTTCAGATTATGTC TCAATGATAGTCACAGATTATGGCATGGTAAGTGCTGGAGTTTTAAAAAGTACTTGAACATTTGCTGCTAAAACAATGCC TAAAGTGTGATTAATCCTGGCATCTCATCGCTTGCATTGTGTCTGACAGGGGTTTAGATTGAAGTACTAAGTGCATAAAA TTGTAGCTCCCTGTTTTTAGGAGAATCATTAGTGAGGATCAAGATACCAGTTTACGCTGCAAAAAAACCAAAAATTAAAT AAATAGAAAAACAGTATTATTTTTAATAATTTCCGTATGCTTAAGTAAATAAGCAAAAGGAAATTATTGAAAAGTGAGTG GGACATTAGAAGAATAGAGGAGAAGAAACCATTTCATTCTGAACTAGTTAAATGCGTGTATTGTGACTTCTAAAAAATAT CCTGTGTCCTATTGATATGATACATTTTTCCCTTTATGTTCTCAAAGGGCATCGTCCTTTCACACTTCTCCTTTGATAAT ACATCCCCTCACCCCACTGATAGAACACATTTTTTCCTTTACATTCTCAAGGCACTATCCTTTCAATATTTTTCAGATTT GGATCATGATGGTTTGCACTGTATTTTGACTCGTATTTTTACTTTGGCAGGTTCCTCCCACAAGTGTGCCTGTAATTGTA AGAGAATATGGGAAAGAACAGGTCTGGATATAAAATGCAAATGTGAACTATCTCAATTTTGTGGCGCCAAAATCCTCTTT ATGGACTGGGTAGTGACAACAAATTTTAAGATTGTTGTTATGCATGTTTTTGTACTATTTTCTCACAGGAATTAATGTAA TGTGTCTTTTTGTTCTAAAATTTTGGACATTTCTGTATTCACATGTCCTAGCGCAGAGTGCAAAATTTTGCCTCTCCAGG CTGACTTAGCTATACATTCTAATTCTAAACAGATCTTTTTTCTTCTGTTTTTTCAAATTTTGGATAATCCCTAACACTTT TGGTGTAGCATTTTTTAGTTATGCTTTAGTCCAATCTCTGGTTATTTTACAGCAGTTATGAAAACCAATACCAGAAGTTC CCTGTGAAGTTTTCCCGGAACATGTGTTCGTATATTGCTATAATTGGGAAAAAAGGGGTCGCTTAAAATTGGCCACAGCA GTCACTTGCAGCTGGCAATGGTATTGTTAGTATGCTTTGTAGCAATTTCATTTGTCATTGGGGATTAAATTTCCCGCCCC ACTCGCTCAATTTCCCACCCCAACTAAATTCCTTAAACCCCATAATACCCTTTACACTTCTTATTCCTCACCCCTCTTCA TCTTCTTCAAACAACCTTTTCTTTTAACTTCCCACCACTCCAGCTTCTTCTTCACACTCTCTTCCTCTCGCTCTCCTTCA ACCTCTTTCTCCCTGTCCCTCTCTCGATTCAGAAGGCAGCAAGCACGACACATCTCTCGTGCTCTCTCGCTCCCTTCAAC CTCCCATTGCACAGGTATGTCATCTCCCCCCTCTTCTCCAACGTTTTCGTTCCGCCATGTTTTTTTTACCGAGATTTTG
CDS sequence (LotjaGi2g1v0055800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCTTCTCGGCGTGCTCCACGCGCCGCCATCGATCCTGTTCCCAAGATCCGCCAAGTCGGGTTCTTCGCTCCCGG AGCTGCCCCACCCGAACGCTCTCAATCGGGTCCGCCTGACCCGACCCACTCTTCCCCTCCCGTTGTTGGTGCCTCACCAT CCCTCTCGCCGGTGATGATTCCGCCGCCGCGTCACCTCTCAGATAACCTCATCCTCCACGCTCGTCCGGTCGCCGCTTCG CAGCTTCGTGCTGACGCTCCGGTGTCCCCGGCGCCGTCGTCTTCGTACTCAAGCAGGATCGCCACTGCCGCCAATGGGAG CTTCTTCGACGGTAGGGGTAGCGGCGCCGGGAAGGTGGTCGCGTCTTCGTTTCCTCGCGGAGGATTTGACTTGACTGCGG TGGTGAAGGTTCCGGCAAGCGAGCTGACCACTGTTTCCGTGGTGAATGACTCGCTTGGACTTCCCGAAAAAGAAAAAGCA AACAAAGGAGGAGGGTCTGCTGTGGAAGTGAAAGACCAACCTGCTAATTCAAAACAGCAGAAACCGAAACCCTCCAAAGC TGAAAGACGTGCTCTTCAGGAAGCTCAACGAGCTGCAAAAGCTGTGGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTA CAACTGTGATGAATGCCAAACCAGCTAAAGCTGTAAAGTCTGCACAGAAAGTTGATAATGTAACAGTTGCAGCCTCTGAG AAGAAGGGGACTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCATGCAGTATGATGACAAGAG CAGAGTGGAGAAAGCCAAACGCCGTGCTGTGGTGAAACAAACTGAAGCGAAGAACAGAGTAGAGTTGTTCAGGCACTTAC CACAATATGAACACGGGAGTCAGCTTCCAGATCTTGAGGCGAAGTTTTTCCATCTTTATTCTGTACATCCTGCTGTTTAC AAGGTGGGTTTGCAGTACCTACTTGGAGATATATCTGGTGGAAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGA GGCCATCAAAGACTACTTGGTTCCACCCGAGAAGACTCTTGTACGAGACCTAACGGCAAAAATTAGTAGTTATGTATCAT TTCTTATTGAGTGTCGACCCCTGTCAATCAGCATGGGAAATGCAATCAGATATCTCAAAAGTCGAATAGCTAAGCTACCT TTAACTGTATCCGAGTCGGAAGCAAAAACTTCTCTCCAGTCTGATATTGAGCGTTTTATAAGTGAGAAGATCATACTTGC CAACAAGGTGATAGTCAAGCTTGCTGTCACTAAAATAAGAGATGGCGATGTTCTTCTAACTTATGGGTCATCATCAGCAA TTGAAATGATTCTTTTGCACGCACATGAATTAGGAAAACAATTTCGTGTCGTGGTTGTTGACTCTCGTCCAAAGCTAAGA GGGAAACTTTTACTTCGCAAGCTTGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAAT GCATGAAGTTACTAGAGTTTTTCTGGGTGCTTCATCAGTCTTGTCTAACGGAACTGTATATTCAAGAGTTGGGACTGCAT GTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTTTGTTGTGAGGCCTATAAATTTCATGAGAGAGTACAG CTGGATTCAATATGCTCGAATGAACTCGGTGATCCAGATATCATTTCAAATGTGCTGGGTAGAGAGGATGTCAACTACTT GGATGGTTGGGCTGATATTGAAAATCTGCAACTTTTAAATCTGATTTATGATGCGACTCCTTCAGATTATGTCTCAATGA TAGTCACAGATTATGGCATGGTTCCTCCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAAAGAACAGGTCTGGATA TAA
Protein sequence (LotjaGi2g1v0055800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPSRRAPRAAIDPVPKIRQVGFFAPGAAPPERSQSGPPDPTHSSPPVVGASPSLSPVMIPPPRHLSDNLILHARPVAAS QLRADAPVSPAPSSSYSSRIATAANGSFFDGRGSGAGKVVASSFPRGGFDLTAVVKVPASELTTVSVVNDSLGLPEKEKA NKGGGSAVEVKDQPANSKQQKPKPSKAERRALQEAQRAAKAVAKAEGNKASGTTTVMNAKPAKAVKSAQKVDNVTVAASE KKGTDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLYSVHPAVY KVGLQYLLGDISGGNARCIAMLQAFQEAIKDYLVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRYLKSRIAKLP LTVSESEAKTSLQSDIERFISEKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPKLR GKLLLRKLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQ LDSICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGKEQVWI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 639 | 639 | 0.0 | – | |
| MobiDBLite | 1 | 63 | 63 | - | – | |
| PANTHER | 1 | 639 | 639 | 0.0 | – | |
| MobiDBLite | 32 | 46 | 15 | - | – | |
| MobiDBLite | 148 | 273 | 126 | - | – | |
| MobiDBLite | 243 | 273 | 31 | - | – | |
| SUPERFAMILY | 313 | 633 | 321 | 2.99E-90 | ||
| Pfam | 331 | 623 | 293 | 3.8E-81 | ||
| Gene3D | 434 | 634 | 201 | 1.1E-69 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
Expression pattern of LotjaGi2g1v0055800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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