Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0057500 |
| Transcript ID | LotjaGi2g1v0057500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1; TAIR: AT3G02420.1 dihydroflavonol 4-reductase/flavanone protein; Swiss-Prot: sp|Q80ZA4|PKHL1_MOUSE Fibrocystin-L; TrEMBL-Plants: tr|A0A151T040|A0A151T040_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0057500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:11808983..11816744) extracted from Lotus japonicus Gifu genome v1.2.
GTAATACCTAGTTAGAAACAAACCTACGGAAACGACATCAATGGGCTGCGTTTGAGCATCAGAAATTCCAAAGAATCAAC ACATTTGGTAGGAGGAAGTTTCACCCTTGAGAGAGAGAGAGAGAGAGTGTTGCAGAAGAAGAAGAACAAGAGTGGAAAAT GGGGGAAGAGAGAGAAGATCCACAGAAGCTGAAGAAATTAGCGGCGGATTCCTACGACTACGACGCCGACTCTCGATGGC CCGATTACTGGGCCAACGTTCTCATCCCTCCCAACATGGCCTCCCGCTCCGACGTCGTTTCACACTACAAACGCAAGTTC TACCAGCGCCACGTTGTGAGCCCTAAACTCTCATCAAGTTTCAATTTTTCCTCTGTTTCGGCACTTGGGTCACTCTCCAA TTTCGTTATGACTCTTTTGGCCTTGTACCAAAAATATTGTTCTTATTTGCGATTATTCTCAAGTTGTCTTAGTAAATGCT TTGCTTTTTTGGGGTTACTATAGTTATTGATGGACTTATATTTTTAATCAGAGTTTGTTTTTCATGAGAATTTGTTTTAG TTTCATTGAATTATTGAACTGATTGTTTAGTTTAGCAAGTTTTTAAGAGAATTATTTGTTTAGATTTTACTTGTGTGCTG TTTTGGAGGACTGCTTGTTTAGTATTTGGCTTCTCTAAAGTAGGGGAACTTTAGAGGGAATTATGATCATTGATTGTGAC ATATGAGATTTCAACAATTTCACAGGTTGTTTTGTGTATGTATTTTTTTCATGATCTCGGTAGACTATTCCATCATTGGA TTACTCCATGCTTTAGAGTTGATTGATTATCCTTGTACTTGCTCTTTAGAGGAGGGAAATTAGTTTGGTCATATATACTC AATTTTATGTTTTGATGCTTCATAGTGTACGTTTGTATCTGGAGAATTTGTCTTACTTGGTAAATTGGTTGTAACTATTG GGTATTGATCAGGACCCTGATCTTGTGGTAGAACCAATGAATTTTGGCAGTTCATCTCAGCCAGCACGACAATCATCAAC AACAACATCGTCAACCCCACCCCGGACAAATGATCAAGTTCGTGCAAGAAGCTCTGGTGAGTTTGTCATTTCTGAATGTC ATAGATTTTTCAACATAATTAGAGTAAAGAGCTCACTATGGAGCACATATTGGTAATCATACTTGTTTACTGTTTATTGC ATTCTAGCCTGAGTCCTACTATTTGTGTTGATTTTTTGTACAGGATCAAGTAATAGAACATCAGGGACATCTGCAACTGC AGGTCCTAATTCAACTCCTTTGCGTTGGGATCGGCAGACAATTCTATTTTCTGTTAATGCTTGGGTACAATCTTTTCACC ATTATGGCATAAATTTGTTCATAACATCATTCTGGTCATGATATGCCATTTGCATATTGACAGTTTTGATGACCACATTT GTCTTGTTTTCTTCAGTTCTCTCTTCTAACTTTTATCACTGAACACTTGTGACAGAACTTTATTCTTAAGAATTTTACAT GTCTCAATTACTTGCTATTATAATGCTACTGCTGATCACATTTGTTTGTATTTCTATTCAAATTTCTATGTTGAGCACTT GTGGAGGAAAGAGAAAATGATATTATACTCCCTCCATCCCTAATTATAAGACCTTTTAGAGACATACTTGATGTGACCCT TTACTAGATTCTAGAAATATTTATTACCCTTTTCCAAATATACCCCTTGTATTTATTATACTTTTGTAATTCCAAAATTT TGATTACGGCTAATAAATATTGATTTACCACACTACTCAATACATTAATTATTGAAAAACCAATACATTTATTAGCTTCA TTACATGTTTTCGTAATAAGTGTAATTGTCTTAAGATGATCTTATAATGAGAGGGACAGAGGGAGTAATTAGTAAGGGAT GTGGTGGCGTTTTCAAATTATATGTAAAATGACTTTGTTTTTGCCCTAAACTCTTTTCTTTTTGATCTGCATCACTTCTG CTGCTGATGCTTTAAGTTAAATATTTTTCTTTAGGTGTTTGTTGTGGCTGTCCTTGCTGTTTTTCCACTGGTACCTAGAC ATCTTTCTCAAAGGGCATATCGTCTTTCTTTTATGGGTACTACTTGCTCTTCTCTGTACTCATTGTACTCACAGTATGGG GTAAGTTTTTGTTTTATCACAACTAACATTATTTTCATCTTGATCTGATTTTTCTACCTTTAACATTGTTACATCGTCTC ATGCTATTGCAGAAGCCAAGAGCATGGAATTTGCAGGCGTTGCAAGTTTACTTTCAATCAATAATAGCTGCAAAGGATTT TATATACTTCATCTACTGCCTTACTTTTGTTACATCACATCTTTGCCTTAAATGTGAGTATTCCTTGGTCAGTTAATCCC ATTATACTCCTATTTGCTTCTTCCTGAAGGGGGAGTAATATTATGCAAGATAACGTCAATTAGTGAGCAAAGTTAATTAG GAAGTTAGTTAGAGTAAGAGATATTAGGTTATAAATAATACAATGGGAAGATTAGAGAGAAACTTTGTTGAGATTTTGAA AGGAAATTAGCGAGGGAGAGTCCTGGTCTCTCGAATACCTGAGTTTAACAGAACTTTCGACCATAAATATAATTTTCTTT ATATTCCGATCCAGTATTTTACAGCTTGTATTAAAGCTCTTGGAAAAACTCTGGACAAGATTCAACCAAGAAAGGAAGGG ACAGATGGAGAAGTTGAAAAATATTGGGGATAAGCAATTTGAAAATTATCAACAATCGGAGATTCAGTTGTTTGATGGAA AATATTAGTATGTGATAGAGCATGGACCAGCTATTGAACTCGCACCTTGAAAAGCCCTAGGTTTGGAAGAGTTACTCGCC TAGGGGAAAGAAGGGAACAGGGGAAGAAAATTAGGGTTGAGTTGGGAGCATTGTGGCCATATGGTGTATAAAGGTGAGGA GAAGAGTGTGAGGTCATATTGTCATTTTTTGTTTGTTTTAGGCAGGAAAATACTTTTCCTAAGAGCTTAACTTTATATTG CTAGTATATTTATAAAAGATTAGGCCAGTAAATAGCAATTCCACCCCAATTCTTATTCCTGGTGCTTCATCAATTTGTCT GACCTGGCAGATACGTGTGTGTAAACAATTTATGAGTTCGGCTCATGCCACCGAAGATGGAGGAAGAGGATGGAGTTGTT GTAGGCTAAGTTGGCGGTGTTGGACGATCGTAACAGTGGAGGCAGAAGTGGTACGTAAGGCGTAAGATTTTTTTAGCTGT CGATTGGGGACAATTTAAATGGATACGGATGGTGGTAAGGAAGATTGAATTACTCTTTTCTGATGGTGAGGATCCTGTAC GTTGGGTAGCTGAGCTGAAACTTACTTCAAGGTTCAGATTATGTTTGACGAGGTTAACTTGCTGAAACTTACTTCAAACT TTGACGAGGTTAAGGTGAAACTAGTGAAATCAAGCATGAGAAGGAGAACTTGCTGCACATTTAACCCACACACCAGGTTG CACAGTGTGAGTTGCTTGGAGTCTGAAGGAGATTATCTTTTAAGTTTAATGGGTCATGCCCGACTATCTAAGATCTACTG GGTCACTTCATTATATGTTGGGCTATGGCTCATTAAGAGACTTATCATGGAATAAGTCATTGTGTGGAGTAATTGTATTT CAGTATTCCAAATGATATACAAGTTCATTCTTCTTATTGTTGAAACTCATACCACTGTTGCTGCAGCTATTTTTGAGAGG AAAATGGGACAGAAAATTGCCAAAAGTCATTAGTAACATCAGTGACCACATGGGCGCCACTGCTAAAACTATTGTGCTAG CTACTGCTGTGGCCTGTGGGCATTAAAGATGATCGATAGGACCCTGGAGGCCATTATTGTCTTTCACATGTATCTTGGCC ATCATTGTTTTCAGCGACTACGAGTTGTTCACCTTGAACACAAGGTGAAAGTTTAGAGGAGAGCATTGTTAGATAATCAC ATTAGTTTGTTAAGAAATAGCTAGTCAGGGAGTTAGTTTCAGTGGCCACATAGGTGTCACTGCTAAAGCGATTGTGCTAG CTATTCCTGTTGCCTGTGGGCATTAAAGATGATTCATGGGACTCTGGAGGCCATTATTGTCTTTCACATGTATCATGGTC ATCTTTGTTTTCAGCTACTACAAGTTGTTCACCTTGAACACAAGCTGAAAGTTTAGAGGAGAGCATTGTTAGATAATTCC ATTAGTTTGTTAGGAAATAGTTAGTCAGGGAGTTAGTTTCGGAGTATGAGATGGTTCACTGTTGGTTATCAATAATAGGA GGGTAGAATTATAAACTGTCTTGAGATTTGGAGAGGGAATTAGGGGGATAGGGCAGGTCTCTCGAGTACGTGGGTTTAAT AGAGATTTTCTATCTATATACACTAATGTTCTTTGTTCATTCTTTTTGTCACTTCCATGACCTGTATTTTATGACATGTT TTTATTATGTTGCAGTTGCTTTGATTCCAATCATATGTTGGGCATTTGAAAATGTTGCCAAGTTCCTTAGACGTAATTTC AGTCGCTCTACCTTGTACAGGTGAATAACCTTTTAAAAATATGTACTAGTTACATGCAAAGAAAATATTGTTGCTAAGAG AGACAACTTTCTCATTAAGCATAGGAGGATATGTTGTCCTTAATAATTGATTGGACACAGTTTTTGTTTGAGGATACTAT TTTTAAGTGTGCCTTAACATCTAAGCAATATCTTTTTATTGCTCAGGAAGTACTTGGAAGAGCCTTGTGTTTGGGTGGAG TCAAACAATATGACCCTCAATATACTGACATCACATGCCGAGATTGGACTTGGATTTCTGCTGGTCATCTCACTGTTCTC GTTAGTTTCTCAATCCTTTCCTTTCTCTTTCCCCTTATGTTCCTATGCTACATATCTTTCTGGCTTAATTGCACATTTGG TCCATGTACTGGCTGACGTGTGATTTTGGTTCCCCTATAAATTTTAAGCAAACTTAGTCCCTCAATTTTTTAAATTGTTA GAACTTAGTCTCCCAATCACTTTTATTTTATTCTACTTAAAACTCATTCTAATTCTCTTAGTGAAATTTGAAATTGATTT CACTAAATCTTGTAAATCTGCTTCAAATCAAAACCCACAAATCAAAATATTAAATTTCACCTGAAATTTAAAAAATAATC TCAAATTTTCCTCTCCTAATCTCATTTCCTATAAACCCTGTTGAGATATCTATTAAGAGATATCTATCAGGATATATCTC TTTGAGGTCGATTTGTTAGGATATTGTTTGTTAGGACTAGAGTTTATATTATTATGATGGATTAGGATAATATTAGATTT TATTATTTAGATTTTATGATTTTAAAGTTAGCAGTTGACTAGGAAACCTCTAGGAATCTAGTCTTTAGTACTTCTGAATC AAGTATCAATAGTTTATTTAGAATACTTCCAATTTCTCTCTTCATAAACTACCAAAGTAAATCTTATAGTTTCAACAAAC CCTTCAAATTTTATTTTCTTACTAAATTTTTACGCTTAAACTTTTAAATTTATGTTATATCCCTTATCCATTTAAAACCT CAAAATATTTGAATAGAAAATAAGGATTTCAGTACATTTGGTCTAAGAAAATTGACAAAGGGACCAAATTTGCTTATTTG TAAAAGTATAAGGACTTAATTAGCTTGAAATCACACCAAAGTCCATACAAGAGGAAGCAGAAGTGCAATTAAGCCGATCT CTTTTCTATGAAAGTTATTGGTTTCCTAATTGCAATCCTCATTACTGAACTAAACATGCAGGTGGCAGCGCAACATAATA CAGACATTCATGTACTGGCAGGTTTGTTTCTTTGCTAAGAACTGCGGTTTTTTTTCATGCATTCATATACAGCAACAAAC TAGATAGATAACTACATATGAAAACAGTCTTGAATTATTTCTACTGCTTGTCTGTGTAAAACCGTATTTCACATCTTTTT TTAATCTGTTAATATTTTCTTTAGAGAATCAATTATGGCACCCAGAAGCCACTCATAATAAAATACTGTCTGTTCTTATT TAAAATACATATTATATAAAGCTTTTCATGTTCCTTTGTATAAATCATTTCAAAATATCTATGAAGTATTACACATTTTC TTTCCAAGTCTACCCTTAACATTGAAGAGTTCAACTGTGATGCGCTGTTAGTGTAAAATAGTCTTACATTGATGATCAAT TATAGTATGCCACGTAGAAGGAACAATTACATTCATTTTAAATTTTAGGATGTTTTTGTAAACAAAGTTTATAGTGGCAA TGCACCTTTTATCCAACATTTAATGCTCTATATTCAATTATTTAACACTTCTCTTAACTTTTCAATAGGGGGGGGGGGTA GTTTATTGAAATTTACACATTTATGTAAGGTCCTGTTTGGAAGAACTTATTTGAGCTTATCTTATAGTATAATAAAAACT TATTCTAGTCTTTGAGAGAACTTATGTATATAGCTCATGGCCTACTTACAAGTTGTTTTGAACTTATTTTCATAAGCTGT TTTGATTAGCTTATGAATTAGAGTTTATGGATACCTATAACTTATTGTGCTTATTTCAATAAGTTTTTCAAGTTAGCTTA TTAATTACTGCTTATGCGATACGCGCTTAAATAAATGGTTTACCCAAATGCACTCAAGACCAACAACTCCCTATGTTCCT ATTTATAAGTCACGTTTTTAAAGCTTTTTTGTATGTTCTCCAATATAAGTCACGCTTAGATATTGATGAAGCATAAAATA GTTTTCTCCAAGTTTACCCGTAATGTTTAAGGCTCCACATTCAGTTATGTATCGCTTATCATCATACATTCTTTTAATTT TTCAGTAAGGCTCATTTAGGGAAATTGACATAACTTTTGTTAGATTTAACATTAACAACTAATTTCAACTAATTTTCATA ATGTGTGATTAAAAGTGACTTATAAGTGAACATGTAGCAATTAATTTTCTTAATCTACGTGTTGTCTTGGAGATAATGAC ATTTATTTACCTGTTTTGTCTTTCCTGCTGCAGCTTTTGAAGCTCATGTATAACGTTCCAGTTACTGCTGCTTACCATCA GAGTGTTTGGGCTAAAATTGGGAGGACGGTTAATCCACTCATCCACAGCCATGCACCATTCTTGAAGACACCTTTATCTG CTGTCCAAAGATGGTGGCTAAGATAGAGGCTTGTCTGAAGTGATTTCAGAAGAACACTAAGTAGACATTTTTCGTGTTAT TTCATCTTCAAATACAAATTGAATTCACATGGAACGATCAAGTACTCGTTGGATTAATCTCCATATAACAGAGAACTAAA GTAGATTTTGGATTGAATAATGATCCAATCGTGAATGACAATTTGATTAAGTAGTGTGTTTACTTGAATATTTAAGTACA TTTTTACATTACCCCTATTAACTGATTTCCTTCTAGAAATAATTTTTTTTTTGGGGTAAATAGTCAATTTGGTCCATGAA AGTGGCATTCGCTGACTAGTTAGTCCCTAAACTATCAAATGACTCTTGTAGTCTCTGAAAGTGTAACATTGATCAAATTA GTCCTGACGTTAAAAAACTTGCTAACCTTTAATGGAGAGTATAATATGACACGTTATTTGCCTGACAATTTTTTAGCTGT CAAATTGATTCCTCCATTGAAAAGTCTATTATTTTTTTCAATTTTTCTATCACTTTGGTCCTTTCTCCGTCTCTCCCTCT CC
CDS sequence (LotjaGi2g1v0057500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGAAGAGAGAGAAGATCCACAGAAGCTGAAGAAATTAGCGGCGGATTCCTACGACTACGACGCCGACTCTCGATG GCCCGATTACTGGGCCAACGTTCTCATCCCTCCCAACATGGCCTCCCGCTCCGACGTCGTTTCACACTACAAACGCAAGT TCTACCAGCGCCACGTTGACCCTGATCTTGTGGTAGAACCAATGAATTTTGGCAGTTCATCTCAGCCAGCACGACAATCA TCAACAACAACATCGTCAACCCCACCCCGGACAAATGATCAAGTTCGTGCAAGAAGCTCTGGATCAAGTAATAGAACATC AGGGACATCTGCAACTGCAGGTCCTAATTCAACTCCTTTGCGTTGGGATCGGCAGACAATTCTATTTTCTGTTAATGCTT GGGTGTTTGTTGTGGCTGTCCTTGCTGTTTTTCCACTGGTACCTAGACATCTTTCTCAAAGGGCATATCGTCTTTCTTTT ATGGGTACTACTTGCTCTTCTCTGTACTCATTGTACTCACAGTATGGGAAGCCAAGAGCATGGAATTTGCAGGCGTTGCA AGTTTACTTTCAATCAATAATAGCTGCAAAGGATTTTATATACTTCATCTACTGCCTTACTTTTGTTACATCACATCTTT GCCTTAAATTTGCTTTGATTCCAATCATATGTTGGGCATTTGAAAATGTTGCCAAGTTCCTTAGACGTAATTTCAGTCGC TCTACCTTGTACAGGAAGTACTTGGAAGAGCCTTGTGTTTGGGTGGAGTCAAACAATATGACCCTCAATATACTGACATC ACATGCCGAGATTGGACTTGGATTTCTGCTGGTCATCTCACTGTTCTCGTGGCAGCGCAACATAATACAGACATTCATGT ACTGGCAGCTTTTGAAGCTCATGTATAACGTTCCAGTTACTGCTGCTTACCATCAGAGTGTTTGGGCTAAAATTGGGAGG ACGGTTAATCCACTCATCCACAGCCATGCACCATTCTTGAAGACACCTTTATCTGCTGTCCAAAGATGGTGGCTAAGATA G
Protein sequence (LotjaGi2g1v0057500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEEREDPQKLKKLAADSYDYDADSRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGSSSQPARQS STTTSSTPPRTNDQVRARSSGSSNRTSGTSATAGPNSTPLRWDRQTILFSVNAWVFVVAVLAVFPLVPRHLSQRAYRLSF MGTTCSSLYSLYSQYGKPRAWNLQALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFSR STLYRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFSWQRNIIQTFMYWQLLKLMYNVPVTAAYHQSVWAKIGR TVNPLIHSHAPFLKTPLSAVQRWWLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 126 | 126 | - | – | |
| PANTHER | 5 | 346 | 342 | 5.6E-168 | – | |
| PANTHER | 5 | 346 | 342 | 5.6E-168 | – | |
| MobiDBLite | 66 | 118 | 53 | - | – | |
| MobiDBLite | 68 | 118 | 51 | - | – | |
| Pfam | 125 | 305 | 181 | 5.0E-15 | ||
| TMHMM | 125 | 147 | 23 | - | – | |
| Phobius | 127 | 147 | 21 | - | – | |
| Phobius | 148 | 198 | 51 | - | – | |
| Phobius | 199 | 228 | 30 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 229 | 263 | 35 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 264 | 284 | 21 | - | – | |
| Phobius | 285 | 346 | 62 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0057500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…