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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0061900 |
| Transcript ID | LotjaGi2g1v0061900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF3326 family protein; TAIR: AT5G15240.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c; TrEMBL-Plants: tr|A0A072VFG1|A0A072VFG1_MEDTR DUF3326 family protein; Found in the gene: LotjaGi2g1v0061900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:13548816..13555195) extracted from Lotus japonicus Gifu genome v1.2.
AATTGTGAAGAAATGGCATCATTGACTCTCAACCCTCCAACTCCATCCCTCTCTTTGTCACGCTGCTTCCCCAAAAAACC TACCATTTCCTGCTCCTTCACTTCCCAATCTCATAAGGTCCCCTCTCTTCTTCTTCTTCTCCTCTCGCTTCAAACGAAAA GCAAATAAAGATGTGATGAAAATGATAATCGATTTTGTTGGTGGGAATAATGCAGTGTAAGAGAGAGTACACGAGCGTGA TGATAGTGCCCACCGGAATCGGAGCTGCTATTGGTGGATTCGCCGGCGACGCCTTGCCAGTGGCTCGCGCCCTCTCTTCG GTTGTTGATTGCCTCATCACTCACCCTAATGTATGTACGCACTTATCCAATTGCATTTTTTCTTAATATTTATCTTCCTA ATTCTTTTTTTTTTCTGAAAATCCTAATATTTTGTTGATATTAAATAGCATTGATTAAAGGTGTGTCCAGCGTCCACTGT GGTGTAAACAAATTGAATTCCGGCACATCAGGAAATATATTTTTGTTTAAATTTAAATTTAAAATGAAAATTATTATTCT TCCTACTTGTGATCCTTAGTTGCCGGTGTAAAACCTGTTTTACGACCGGTTAGAGTGCATATTCATTAAACTCAAATAAC TTTATTGATGATTTCTTAGTCAAGAGCCATTGGTGACATTTAGTTTTTCATTTTGAGGAGCTATCAGGTAGATTTAACAG TTAAACATAGGCTTAGTTACATTCTTGGTCTCTGTGTTACACAAATTTAGTCAATTTTCATACACTTAAAATCATTAAAT TGTTATTTTTATTAAAATATTTAGGATGTACAATTGATTGGGATAAAAAAATAACTTTGAAAGTTATACAGTGAGAAATT TTTTAAAAAGTTGATAAAATTGAAAGATTTTGTATGATGTGGGATAAGGGTTTGAAGAGGTCGAAAAATTGGAATTTTTT ATTTCGGGTGAAATTTAATATTTTGGTTTGAAATTTTTTAGTGAGAGAAAGTGTAAAGTGATTTATTTAATTTATGAAGA TTTTTCTTAGAAATTGAGAAATTGAGATTTTAAGGAGAATGAAAATGCTTTAGAGCCTTAATTGTAACAATTAAAAAGGT TGAGCAACTCAAGTTACTTAAAAAATTATTAGGGACTAAATCACACATTAGCTATACTAGAGGGTATTATGTCTATTGGG GGGGGGGGTCCTTCAGTTTTATTTGTGTTTGATTGTATCTGAGTGTACCCAGCTCCATTGTGTCCATTCAAATAGTATAT CACTCACATTTATGGTTTCAGTATTCATTTTATCTAAACCGTGAAACATCTTATTAGTCAATCAGGCACAGCGGTCTGTG TTGGGGTTGATTGCAATGTAAGTCTCACATTGCTAATGAAGCAGAAAAAAGATCAAGTTATGCATCTTGGAGAAGTCCCA CTTCGCTTAGATTAGTGAGGGATGGGAAGATCCAAGGCTATATATAGGGATCTCAAGCTCCTTGTTTCAACACACCAAAA ACACCAAAGATGTAGTACCTGAAAACACTTTAAGTATATTTGTGTTTTCTTTTTCTCTTATGCTCTTGTTTTAGAGCATT GTGAGATGTAGTTCAAATATTTACTTTAGAGAGTGTGGGTGTACTGGGGTCATGGGGTCATGGGGTGGTTGAGAGTGAAG TCTATGTGTTGTAACAATTTTCACATAGTGTTTATTCTCTGGTTGTCGGTTTTGACAACGACCGTGGTTTTTTCTCCGGT TTTGGAGTTTCCACGTTATATTCTTGTGTTGTTGATTGCGCTCCTGGTTTATTTTACTTCTTCAGTTGTGTTATTTCCTA ACAGTCTGATCATGGTACTGCCTGTTTGCTTTCACCTGACAAAACAACATTGCTTTTTACTATCCATCTATCATTAAGAT GGATTTTATCTATTTTTTTGTAATAATTTTATCATGTTCTTTAATGTGACAATTCTCTAATTTCGCCAATGTATGGTTGT CCTTTTTAACAATGTTGAAGAAATATGCATTTAATTTTACTGGAAATTTTGCAGGTTCTTAATGCGGCGATGCTATACTG GCCAATGCCTAATGCATTATATGTTGAAGGTTATGCTCTTGACAGATTTGCAGAAGGATTATGGGCCTTGCAGCCTGTTC ACCAAAACAGGGTATAGCTATAATAATATATGTGTCTGTGTGTAAATGTGCTGCTTCCTTGATTAGTTTATATCATGCAG TGTTGCAACTTACAAGGTGTTTTCTGCATCATGCTATGTTTCTTTCCACATCAAGCTATGTACTTAGTTATATTCTGTTA CTTAGGTGGGGTTAGTTCTTGATGCTGGAATAGAACAGGAGCTCCAGGTTCGCCAGTTACAAGTAGCTGATGCTGCAAGA GCTTCCCTTGGATTGCCTGTTGTAGAATATATTGTTACAGACACTCCACTGAAGGTATCTACTATCCAGAATTTTAATGA GCATATGTAAACCAGCCTAAATTTTTAAAAACATTTTTGTTGTATTTGGCATACCTTTGTTTATAAAGTGCATGTTTGGA AATTCTTCTAGAATTGATTCTAAAGCCAAACTCAACTATGAGGAGAAGCGTCAGTGACTAGCCTGTGGGTTGTGGGCTGT GGCTGTCCAAATAATCCAAACATGCAATTAGTCATACAATTTGCGAATCATTAATTTGGTGCATTTGTTAAAGGTTGATG GGAAGTTTTATGATCAGAAATGGCTAACTGCTATTCATCTTAATTTTGGGAGCACCTTGAAGTTAGCATGTGATGTCTCA CAAAAAAAATTATTAGCCATGTCATTGTTAGATACTTGAGTCTAATTTTAAGGTGACCAGATTTATTATAATTACTTACT TTATGCCAACAATGGTGAAATTTTCTACTTTTCTTACTTTTTGATTGGAATGAATCACATGCAAATCAAAGTTAAAGGGT TTGTAGTTGTAACACTACAATATATGCTATTTTGTGAACTAGAACGAACAAAAACAAAACTTAACAGTTTTAACCGGATG AAACCAGGCCACTTATCTTGGTGTTATATGTGTTCTCTTTCTGTGTCTCGAATTTTAAACTTGGAACAACTTTGCACTCA TTTTAGACATGTCTTGAAGTAGTGTTTATTTTGTTCTCAGCTCTCGGAGTTGGTTATGTTTGAAGTTGGATAGAAGGAAG TCTTCAGGCTTGTCTAATTGTCTATTAGTCGTGATCTGTAGCAAATTAAAGCCTAGCCAATGTTAGAGCAAGCTTACGAT CTTATATAATACAATAGTTTGACTTGTATTAAATTTTACAGGTAGAGAAGTGGGTTGATCCTGAAACTGGCCAATCAACA GGGAGGATTAAGCACCCAGATTCTTTACTTAGAGCTGTGCAGACTTTAATGAATAGGTCAAAAGTGAATGCCATTGCTGT GGTTGGACGTTTCCCAGATGATGATACAGATGATGTAGATGACTATCGGCAGGGAATGGTGAGGCATTTAATGTTTATTT AAATAGTATGGCAACCTACTAAATACAGAAGAAATATAATTTTGTTAATTGTGAAAGTTATACTGGATTAAAAGAAATCA TGGATGATATTGCTCTTTCTCTTTCGTGGTTCTCCTCCCTTCTAAGTTTTCCTGATGAACACAGTCATCATTCTCTTCCA TATTGTTCTTGAATTTTTAACTTTTTTTTTATAAGCTCTTGAATTTTAACTTGATGTTAAGATTTTCAATCAGTTCTTGA CCATTGTGCTCTAAATTCCAGCAGAGCTGGCAACTTCTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTT GTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAGTCCCATACCTTGC AATGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCACGACTAGTC CCGGGCGAACACTACAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCAGCTCAGAGACATGGTGGAAGGCTCTGATAC CATTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCAC ATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACAACTTCTCTTATTTTTTTC TCATGCTTAGTTTTTCTTTTAAACATTTATTAGTCATACATTTTCATGGTCAGAAGTTCAGGAATGAGTCTTATTGTATC AGTTGGTTGCTGACATTTGATTTCCTCTTTTTCACCTTGTTCAGGGGATAGACCTATTGGCTGGAGTTGAGGCAGTTATA AGCCATCTAGTGGTGAAGGAGTTCCAAATTCCTTGTGCACATGCTCCTGCACTTGCTCCACTTACCATGAGCCTATCTCT AAGTCCAAAATCAGCAGCTGAGGAGGTAGGCTAACTCTAGATGACAACTCATTTGAGCTTTTGTTCAACTTAGTAGAATA GGATAGCTGCCATGTTTGAACTAAATGTAACTTGCAACCTGAGGTCACAATGGAGTCAATCAAGTCTGAATTTGTTTGAC TTTCTCCAATTAGCACGTTAGAAAATTTCAGTGAAGATGAAGTAAAAGAAATTTAAAGTCACCACGTTTTGAACATTAGC AATTAGAAATCTTAATCGTAAGAAATAGAATCTTCAAAGTTATAAGTTGGAATGAAAAGGAAATACCCCCGTACCAATTT GCAAACAATACATAATCAACAACTATACCTTGTCCTACTAGAAGTACTCTATGAGGTTGGCTAAGTGTGTGCATGGGTTT AGCCTGTAGTGCGTTCAGCCGAATCGGGAAGTGGGATATCGAATCCCGAGGCTCTAAATGTGAAAAGACAATGGACTTCC GCTGGCGTTGAACTTAACCAAACGTAAATACAAACAGAGCAAATCGATTAGGCTCTATCAAAAAACATCTTTTTGTATAA AGCCATCTAGAGTAATGTTTATGCTGAAGTTTTCCTCATTCCTCCTTTACCCCTTTATATTAGGAGGTCTTCAATGTGAT TCTTTTGGAAGAATTAATGTCTCATTAAATGAATGAAAAAATTTATACTTGTAGAAAATGCTATATTAATGTTAAGTACA TTATCAATTAGATATTCTTGTTCTCTGCACTTGTGTGAGTAATTGTACTTGATGATAACTTTCTTTTGTAAAATAGATTG GTTACACCTTCCTGCCATGTGTGCTCGCTGGCCTAAGCAACGCTCCACAATACATGGTCATGCACTCCGAATCCACGGAC AAAGGTTGCATAGTGGCACGTGATGTGGATTCTTTAATCCTTCCAAAAGATGCTTGTGGAGGGGCTGGAACTCTTGCATT TGCAAGAAATGGAAAAAATAAGGTATAAAGCCAAACACATTAATTTTCCAAATTTTTTGTTTGATCAGCAAGAACAACTG TTGGCTGATGGCATATTACCTTCCATCCATCTGTACAACAAACTGTGTCTAGAAATTTCTGAGACTATTGCTTCAATTTA TGACAACACGAAATTTTGTTGCAGCCACTTATAATTGCTGTGGAAGAAAATGAAACAGTTCTGGATGATACTGCAGATAA ACTTGGTCTTGAAGTGGTATGCAATTTTTTATTTTGTTCATTTGTTCTTTCAGAAGATTAGATAGTAACTTTATTTATTT TAAACTTTGTCATTTTAGAAGATTAGATAGGATCTTTATCTATTTGAGTTGAAATTCCCTACAAATCAATTGGCACAAGT TCTGCTGATTATATTTGAAATTTGCTCACTAAATGCCACGAAAGTATAGATAAAATGGGGAAAATTGTAGACAAAAGTAT AGATAGATATATACCATGAGCAAGTGGATCAGCTGGTGGGAGTTGATTCTTCTTAACCAGAGGTCTCGGATTCGAGCTGT TTGTAAGCTATGCTAAATACTTGTTGTGGGTGGGATAGCTAGACAAGAAAATAAAATTATCATTTTAGTTCATTCAAGAG CAAGTTTTTTTTTATTTTTACTTTTCATATGTAGAAGTCATAATTTAAAATATAAGCACCATGTCAACAGTCCTTTATTT TTCTTTCATTGCAATTGAAATGAAAGCATTTTGGTTGATAAAATTGCCTCTTCTGCAGCTGCATGTCTCAAATTATTGGG AGGCCATTGGAGTTATTGCAGCTCACAAGGCGGGGATAGATCCATATTCTCTTAGACGAAATAAAATTCTTAACATAGGG TGCACTCCTTGTATGCCTGTCAATGGTCATTCCATTTCAAGAGAAAGAGCTATCTCCTGA
CDS sequence (LotjaGi2g1v0061900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATTGACTCTCAACCCTCCAACTCCATCCCTCTCTTTGTCACGCTGCTTCCCCAAAAAACCTACCATTTCCTG CTCCTTCACTTCCCAATCTCATAAGAGAGAGTACACGAGCGTGATGATAGTGCCCACCGGAATCGGAGCTGCTATTGGTG GATTCGCCGGCGACGCCTTGCCAGTGGCTCGCGCCCTCTCTTCGGTTGTTGATTGCCTCATCACTCACCCTAATGTTCTT AATGCGGCGATGCTATACTGGCCAATGCCTAATGCATTATATGTTGAAGGTTATGCTCTTGACAGATTTGCAGAAGGATT ATGGGCCTTGCAGCCTGTTCACCAAAACAGGGTGGGGTTAGTTCTTGATGCTGGAATAGAACAGGAGCTCCAGGTTCGCC AGTTACAAGTAGCTGATGCTGCAAGAGCTTCCCTTGGATTGCCTGTTGTAGAATATATTGTTACAGACACTCCACTGAAG GTAGAGAAGTGGGTTGATCCTGAAACTGGCCAATCAACAGGGAGGATTAAGCACCCAGATTCTTTACTTAGAGCTGTGCA GACTTTAATGAATAGGTCAAAAGTGAATGCCATTGCTGTGGTTGGACGTTTCCCAGATGATGATACAGATGATGTAGATG ACTATCGGCAGGGAATGGGGATAGACCTATTGGCTGGAGTTGAGGCAGTTATAAGCCATCTAGTGGTGAAGGAGTTCCAA ATTCCTTGTGCACATGCTCCTGCACTTGCTCCACTTACCATGAGCCTATCTCTAAGTCCAAAATCAGCAGCTGAGGAGAT TGGTTACACCTTCCTGCCATGTGTGCTCGCTGGCCTAAGCAACGCTCCACAATACATGGTCATGCACTCCGAATCCACGG ACAAAGGTTGCATAGTGGCACGTGATGTGGATTCTTTAATCCTTCCAAAAGATGCTTGTGGAGGGGCTGGAACTCTTGCA TTTGCAAGAAATGGAAAAAATAAGCCACTTATAATTGCTGTGGAAGAAAATGAAACAGTTCTGGATGATACTGCAGATAA ACTTGGTCTTGAAGTGCTGCATGTCTCAAATTATTGGGAGGCCATTGGAGTTATTGCAGCTCACAAGGCGGGGATAGATC CATATTCTCTTAGACGAAATAAAATTCTTAACATAGGGTGCACTCCTTGTATGCCTGTCAATGGTCATTCCATTTCAAGA GAAAGAGCTATCTCCTGA
Protein sequence (LotjaGi2g1v0061900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLTLNPPTPSLSLSRCFPKKPTISCSFTSQSHKREYTSVMIVPTGIGAAIGGFAGDALPVARALSSVVDCLITHPNVL NAAMLYWPMPNALYVEGYALDRFAEGLWALQPVHQNRVGLVLDAGIEQELQVRQLQVADAARASLGLPVVEYIVTDTPLK VEKWVDPETGQSTGRIKHPDSLLRAVQTLMNRSKVNAIAVVGRFPDDDTDDVDDYRQGMGIDLLAGVEAVISHLVVKEFQ IPCAHAPALAPLTMSLSLSPKSAAEEIGYTFLPCVLAGLSNAPQYMVMHSESTDKGCIVARDVDSLILPKDACGGAGTLA FARNGKNKPLIIAVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPYSLRRNKILNIGCTPCMPVNGHSISR ERAIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 403 | 384 | 2.7E-224 | – | |
| PANTHER | 20 | 403 | 384 | 2.7E-224 | ||
| Pfam | 39 | 378 | 340 | 3.8E-156 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0061900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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