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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0073900 |
| Transcript ID | LotjaGi2g1v0073900.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc transporter 5; TAIR: AT5G38380.1 zinc transporter; Swiss-Prot: sp|Q28CE7|ZNT5_XENTR Zinc transporter 5; TrEMBL-Plants: tr|A0A151T0E1|A0A151T0E1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0073900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19244990..19252493) extracted from Lotus japonicus Gifu genome v1.2.
AAAACTTGAGTACACAAACAAGACTCTTGGACCAAAACAGAGAAAACAAGGCAGTGGTGTTGTGTGTAATTGTGAGAACA CGAAGAAGAAATCAGGCATGGATTTGTGATTTGAGCTCCGTTAACAACACTCTTCTCCTCTCAGTTTGCTTGCTCCATTT CCCACAATGATGTCCCCAAACCATTTGTCAGAGGATCGAGGAGGGCCTTCTCATCATCATTTCAGGTAAACAAAAATGGT TGATTCATTGATTGGTTTTCCCCCAGTTTTTTCAAAGTCAATTAATTCTGAGCATGACCCATTAGATTAAGGGAACCAAA GTGAATATTATTTTTATTTAAAGATCTTTTGAAGGGTTTAATTTCTAATTCTCTTAAGCCACTTCTTTACTGTTTCAATT GGGACTGTGACGAGTTGCATTGATTGAAGCGTGCCAATGCTTTGTTGTTTCTTTGATTCCGCCGCGGCGTAATGTTTCAG TTGTTTTAGGAACTGGCTTGCATTATCACTTTTTGGATAATCATGAAAACAAGTAACATTTACTCTCTTGTTTAGTATCT ATTTGTTTAATTCTTGAGATTGTGTCTATTATTTGCATTAGACTCTTTTTGCTCTTACTTACTTTACTAGTTCACCTGAA AGACCCTTATTAGCATTCTTTTTTATTGAGTAGTATCTTAATTTAGTTCAATGGCATGTATGTTATACTGTTCATAAGTT GTACTAGTAGTCGTTATACATTAGAATTTCTTAGATTAGTGGCATTCTACTATACCACACTGATTACTTGATTAGGGATT GATGAACTATTGTAGATGAAGGTTGTGTATTTGAAGTATTGACTTGGTTTGCCTAATTGTACGGGTTAAAATTTACCCTT TGTAGACACACACCCTTCCAGATAATTCATACTGCTGCAAATTTCATGAGGATATGGTCAATATACTCCATGTACCGCTA CTTATACCAGACTGGAGCTTCAGTTGTTCTATTTCTGTTTGCCTGCCTTGCCCCAACAGCGATCATATTTTTAGTTTTGC AAAAGCCTTGGAAGGGAAGGCCACTTTCTAATACGCAGGTAAGTTTAATTACTAATTTCTGCTGAGAGTATTCAGGAATG AGCTTAAAATATTAAATTCAACAAAAATTTTATCATGATGAGCACATTCCTTAACGAATACTATTTGTTTTTTCAGATTG TGCCATCTATAATAAATGGCTTTATAACAGCACTGTATCTGGTCTTGTGGGGAAAGGGACTGAAATCATGTGGACCAGTT AGGTTGGTTTTTGTATGATTGAAGAAAATTTCAGTTCATAACTTTATTGTATCAAGTGCTTAGTTTTAATTATATAAATG CCTTTGAGTTATGTGGCATCTTCGCTGATGCTCAGTTATATAAGTGCTTAGTTCAATACTTCAATTGAATCATTGATGTC ATCCACCACTGTTATATAGCTATTTCTTGTTTACCTTAGCATTGATGTGCAGACTGTTGACTGGTGCTTGATTTGATGAG CTATTTTTTTTTTTTCTCAAACCAATTGGTATTAAAACTTAATGCAGTTACCCTTTTTTATTAAATTTAGAGCACTATTG GCTGAGTATTCCGGTGCTGTCCTTGGAGTACTTTCTGCAGTGTTGTATGGTAGGAGAAGCCATCTGTTGAAAAAGGTAAC ACTTTCAGATACTCCCATTCATTGGTATACTGTGTATGACTGATACCACAAAACCATATACTCCAATTGAATTAAATACC TATCCTATAAGAGTTTATTTTTTCCTGGGTGCAATTTTCTCCTTTCTTATTAATCTGCATTAATAAATATCTTCTGAACT AGTAATCGTTTCCTGAATTGTTTTACTACGCCTCATGTAGATTTTTTTTTTCATTGCCCCGTCTTTAAGCTCTACCAGTA ACATTGTTTCTTGTTGTATCTAGTCTTAGCTGTTTTAGCAGATCTCTTACGATCCCCCAGTTGTATTTTTATCCTTATCT ATGATATAAAACATTATTTCATCATTAAAGATTTATATGTTTAGTTTGTGTTATTATACATTAAGTGATGCTGTATGCCC TGCTTGTTGTGATTGGCGTGTTTGAATGAAGTCTAGAATATTCTGTAATGTGATGGATACTTTCTTATTTTGAACCAGAT AGGTGGCCTAATTGCCATGCTGGCATCTTTATACTTGCTATCTGAAGGATGGGCTATGGCAACATATTCTCCATTCTATA TCCTTATTCAGACTGGGTTATTTTCTTCCTTAAATTGACAAAGTTTACTGCTAAAATATGTTTTGCATGCTAAAGTACCT TTTGCTCCTTATATTCGGTTTCTTGTTTTCCAAGGCCTTTGTCCTTTTCCATATATTCCATAAGATCTGTGAACTTAACT GGAATTTACCTTGGGAAGATAGAGATGATTCAGAGGTTCAGACTGAACAAATTTTGGGCTTGAAGCAAATGTTCGTTCCT ATTTTTGCTGGTATCCTATCAGCACTCAGGAGAGTGATTGCGAGGCGTGTTTCAATCAAGGTGGTAACACTCATGTAATA TGCAGTTAGTAATTCCTCTTTGGTACGAGGTGCGTTATGTGTACCATAATAACTAACCATGGACATCTTTTCTTTTCAGA ATCAACTTAAAAAGAGACTCCATGCTTTAACTATTGCCTCTGCGACATGTTTTATGTTTCCTATTGCCATGTGGGACATA ATCATAGTGAGTTCTATTACGAAGAACATTTCATTTTAAGGTCTATATTAGGATAGATTTATGTCGATGTAAAATTCTTC TTGTCTTGTTTTGTGGTTTTGGCTTGATTTATGTTTGACAATTTCTCTAACCATGTTCCACCTCCTTTGGGTCCTTCAGG GATCACCTTCTGACAGCAACGGAAAACTCCCATTCTCTGCCTGGGCCTTCTTTAGCACTATTCTCTTTGGAAATATTTTG ATATTCTATGTTGACAGTATTGCAGAAGAGAGGTATGCCATGATAGTATTGCCATAAGTGATGGTTGAGTGAGAAAAAGG AAGGTTCTTTTGCATTTTGGCTGGCTTCTTATGCTCTATAGATTATCAGATGAGGTTCTATATTTTAACTATTAACAATT TCATCCCAGTAATAACATTCTTATTTTGAAATTGGCTTCAACTATCGGTTTTATGAAATACTTATCTCAAAATTGGTGAC TTGAAGTTTGTTATAATAGGTCAAATTTAAATTCAAGTTCATCTAGTAAGATCTAAATTGGATTTGAAAGTTCTGTATGT TGCAAGATAAGATAATGCATGAGATTTGATGATTTGGATCACTTTGGAGATTGCACATAATTTGGATCACTTTGTAGATT ACTGAAAATTCATACTTCATAATGTAGATTGCACATGGTTTTCTCCTCACCAAGGCATTTGATGGTGGCTAGTGCATGCA TCATCATCATGGAGATTGTGTACAAGATGGATTTTTCTCTTACAGGCTTTGTGATTTGCTGCTTAATATTAGGTTTTGGT ACGTCTAGTGCTTAGCTTTGAATATTAAATTTTCTCTTCAAATTTTATTTTCAATGGATTTTTGGTAGAGCTTAAGTAGC CATGAATTCATTATCATGCCTTTTCTATTTTATTTTTTTTCATTTGGATTGCAATTCAATTAGTGGGGTAAATGTTAAAA GTAGCTACTTAAGTATGATTGGTAGTTGTCAGACTCATTAAATCCTAAGATTTCATTTATAGTTTTTGTTTCTAGTTCTC ACTTTTGGTGGTAAAACTCATTGATGATGCGAAATGAAGCTAACTCATATTGACATCTACAGCCATCTGTTTTTTAGTTT CCTTTGATTTTCTGCCGATGATTGTCTTAAGGGTGTTTCAATCTTTGCCTTGTAGATAGGTCTAGCAGATAGCTGGCAGC TGCATTCCTAGTTTTTCTCATTTGATTTTTTTTAAGGATACCATATCATGTCCTTAACTGTACTTGTGCTTTGACTGCTT TCTTTCTTTCCGTTCTCTTTTATAACATAATTTTCGTTAGAAAATATATCAGAGAAGAAAGTTTTATTTCTCTGATTTTG ATTGAAAAATACAATCACTCATTTAAAGGCCGAATAGGCTCTATATAAGGAAACCAATTGATAGAAACTCAATCAGATTG AGGTAAGAAAAGGGAAGAACTGAACAGGTAGTAGATACAAAGAACAGAAAGAAACTGAATATGCTTCTCTTATTAAAAGA ATGAAATGTAGAATACAACTCTAGCCTTCGAGAGTCTAAAACTCTCCCAAACTGATCCAATTTCCAGAATGGATCTTCTA ACAGTTCTTACCATTCTTAAAGGGAGAGCTAACTCTACAGTTACAACCGATTTTCCCCTAACTAACAACCTCTTATTACT ACAGATTCTCTCCTAAGTAACTGACTGTTATTACAATGAGAAGTCTCTAACTAACAAACAGGTCTAGTACCTCAGGCCCA CATAAAGTCGCCAAACATCTTTCACTTACTATTCCTCCTATGATAAACCTTTGCAATCTAAGGTGTATCTTCAATTCTCT ATCACCAATCTGCTCTAAAAAAGGACAGAATAATCAGAAATCAGATTTTATTATAATCTGTTACTGACTTAGATTTTATT ACACAAGTCAAAAGTAAACATTAGGAAAGAATCACACAAAATCAAACTTAATGACACCCAAGATGCTTTTCTAACAAGTT TGCTCATTCAGAAAGAAAAGGATGAAGTGATATAAATACTTGAAAATTTAACTTAATACTTTTTGTGAACAGTGATACTT AGCTTCTCAGATTCTATATACATAGGTTTTATCCCCTGGAATTTATTTCCTGGAAAAAAGGTTAAATCTATTTTAAACTT AGTTGATCTTTAACACCATGCATGTGGAATTCTTGAGTTTCACTGGTCATTTGTCGCTTTTTCTTATTAGGTCTTTCATA AGAATGAGGTTCAGTATTGTTACTGGTGTCTTGACTCTTGGAAATATTGAATGTCTATCCACTTTATCTCTAGCCAATGT GTAGGACTTCTAATACACCCCGTCATGCCTAGAGTTGGACATCTGGAGCGTGGAATTTGCAGGACTGGACATCTGTTTTG TCCACTCTTCTGATGTTTGATTATTTTTCTAGGACTACTAGAATAAGTGCATGTAATTTAACTTATTCTGAGGAAGGAAT CACTATTCCAACTAAGCTCTTGAAAACAATTTGTAACCATATATGCACTGAACTCAATTTTCCAATATTAGTTATCCATT ATATTGGATTCCCTCTGCCTTACTGTTTTAAAGAGTTTTCATTGCGGAAGACAGTTTATTGTTATTAATACAGCAGAAAT ATGCAGTACAATGATGCATACATATTCTCACAATCGGTTTTGTGAAATCTGAAAAGATTTTTAAAACTGTCGACTGCATA TTGGCATACTTTGGTGTGCATTGTTCTTGCTTTCCTTTCTTGTTTCTATTTTTCTCCTTTTAGTAGTTTATCCTGAATGC TCATTGCAATGGAATTTGGTAGGGATATATCAAGCAACTTCACTGGAGCGCAATAGAAAAGATTCTACCCGAAATTCTGA TTTATCAAATGGAGAATTTGATGATCAAATCCAGATGTCGTCGCTACCTACTTAAGTATGTGAATTTATTCCTTCAACTT CTATGAAATGTGGATTTGTTTCCAATTGCTATTGTTCTTGTTGTCAAATGTGGATTTGTTTTTTATTATTTGCTTGGGAG ATGTGTGTGTATGCAATTCTACCCTTAGCTTCTGTTTAATTCAGTTTATAGGTATGGGATATCCTAATTGAAACTTGACT CCAATGCTTTAATAATAGTATCAATACTGTACTACTAATTCTAATTATGATATATGCTAAGCCTGATTACCAGTTTTTGA ATGTCCATTTAATATTCTTTGTAAGCAATAATTACATAAACATCTAAAAAATAAAAATATATAGGGATATAAATTTGGAG CAATATTATGAATTGAAAGAGCACATAGAAACATGTGTCGTTTTTGGATAGAGTTGCAATTGTAAATAGATGACGTGTTA AAAGTAAATGGGAAATGAGAAGGTCTATTGTGGGTTGTTGATATGTTTCTGATTTACTTTTATAGGTTCTGATTTTGTTT GATTTTTGTACATATATATATTTCAGGTAGTTTGTATAATTTTCAGATAGGAATTGATTTGGAGTTTAGACTTTAGACTA TTATCTCTTTCTGATTTTATAACAACTCTTTGTATCTATAAAATCCTCTGTATACGCAGATCACTATCAAATTAGTAAAT TATACAAGTTCTGTCTCAACTGTTAAGATTTTTTTTCACCAAATTATTCCCTCAAAAATATACAAAATTTCACCAACTTC AGTCCTGCATATGTGCAAATTTGGCTGGATTGTGGGCAAGTGCGACCTTAATATTTTGACATAGATTTACAAATGGGAAG ATGATGTGAATATTTTATTAACACTATTTGTTTAATCTGAGAGACTTAAGTTTGTAATGTCTGTACTTTTTGCCAGGGAG TTTGGGAGAACATAAATCCATGGATTCTATTGACACATAGTCTTCTTGCTCTATCTTGAGTTATACTTCTGTCACGCCAT ATGGTGCAGAAAAGCTGTTATTCATTGTGAAGATGTGTTATCCACCACTTCTGGAGACTTCACGCGGTAACCTTGTTATC CGGCACCCACCAGATTCATGATGATCGATCTGATCTGAACTTTTGGGAGGTTGAAATGCACTATTAACCTACATAGTACA AAGTTCATTATTTTTCTTCCAACAGGATCATTAGCCTGGCTGTTCCTTATGTAGTTTAGGAGTAATTTTCTGTCAGAAAA AAAAAACCATTATTTGTAGTCCGGGTAGAAGGTCTTTAAGTTTGGATACAAGTGAATCACTCATATGCTTACTACACATT TTAATCAAGTTATCAAAGCCAAACACGTTTTTTTTGTTTTTTGTTTTTGCTTATTTTACCCTTTTCTCCCCTTTTTGTCT CTTTTGTTTCCATTATTTTCTTAAAATATATTTGATTATCTGGATTTCCAATAAGTGTATAAACTGAAGCTGGCCCTTTT TGCTCCACTTCTGCAGCAAGAAGCTGCCATTACATGTTTTGATTAGATATATGTATTCGCACTGTTTTGTGCTACAGGGG TATGTGTGTGTGTTGTTTTGAATTTTTGTGTGTGGATAAAACAAAGGTGCATCCACAGAAAATACTAATAAAAGGAACTA GTTATAATACTGTGTTTGGTAATGAGTTGTGCACACTCCGATGCACTTGGGTAGAAGCTATGGTGAAGACTAAGAACATC TTCAATGCTAGTTTTTAATTCTTAGTTCTTAGTACTATTTATCTGGGCTCGCATTGCCACATGTACTTAAGCAACTTTCA AGCAATTTTGCTCCAACCATGAGTTCTTAGTTCTTAGTTATTCCCACTATTCATTTGGTCCTAC
CDS sequence (LotjaGi2g1v0073900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCCCCAAACCATTTGTCAGAGGATCGAGGAGGGCCTTCTCATCATCATTTCAGACACACACCCTTCCAGATAAT TCATACTGCTGCAAATTTCATGAGGATATGGTCAATATACTCCATGTACCGCTACTTATACCAGACTGGAGCTTCAGTTG TTCTATTTCTGTTTGCCTGCCTTGCCCCAACAGCGATCATATTTTTAGTTTTGCAAAAGCCTTGGAAGGGAAGGCCACTT TCTAATACGCAGATTGTGCCATCTATAATAAATGGCTTTATAACAGCACTGTATCTGGTCTTGTGGGGAAAGGGACTGAA ATCATGTGGACCAGTTAGAGCACTATTGGCTGAGTATTCCGGTGCTGTCCTTGGAGTACTTTCTGCAGTGTTGTATGGTA GGAGAAGCCATCTGTTGAAAAAGATAGGTGGCCTAATTGCCATGCTGGCATCTTTATACTTGCTATCTGAAGGATGGGCT ATGGCAACATATTCTCCATTCTATATCCTTATTCAGACTGGGTTATTTTCTTCCTTAAATTGA
Protein sequence (LotjaGi2g1v0073900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSPNHLSEDRGGPSHHHFRHTPFQIIHTAANFMRIWSIYSMYRYLYQTGASVVLFLFACLAPTAIIFLVLQKPWKGRPL SNTQIVPSIINGFITALYLVLWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRSHLLKKIGGLIAMLASLYLLSEGWA MATYSPFYILIQTGLFSSLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 171 | 171 | 1.8E-86 | – | |
| Phobius | 1 | 44 | 44 | - | – | |
| Phobius | 45 | 71 | 27 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| SUPERFAMILY | 65 | 157 | 93 | 1.31E-7 | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| Phobius | 83 | 102 | 20 | - | – | |
| TMHMM | 84 | 101 | 18 | - | – | |
| Phobius | 103 | 113 | 11 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 114 | 133 | 20 | - | – | |
| Phobius | 134 | 144 | 11 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 145 | 171 | 27 | - | – | |
| Phobius | 172 | 180 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0073900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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