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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0074100 |
| Transcript ID | LotjaGi2g1v0074100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidate cytidylyltransferase; TAIR: AT4G22340.3 cytidinediphosphate diacylglycerol synthase 2; Swiss-Prot: sp|O49639|CDS2_ARATH Phosphatidate cytidylyltransferase 2; TrEMBL-Plants: tr|V7BEP1|V7BEP1_PHAVU Phosphatidate cytidylyltransferase; Found in the gene: LotjaGi2g1v0074100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19338063..19343448) extracted from Lotus japonicus Gifu genome v1.2.
ATGCACAAGGATACGAGTACCAGTGCCCCATCAAATACAAGTGGTCGGATTAGGCACCGAAAACGATCGAATGAGGTTAG TTGTTTAAATTTTTAGTTCTTACTTTGAATCATTTTTTTGTTTCTTTGCATTAAAAATATATTTTGATCAGTTCCTTTAA TGTAGCAATTGATTGAGCCTACACAATGGGTGACCCTGAAATTTCAAGAGAACATTAAAAAGTGTCAAATGTATCGAATT CTGCGAAACAAATAATGGGAAGCATGGTTAACTTTTGATGACTTTCTTTTTCCCCTATTTAAATTCTAAGTTTCTGTCCT TTAGGTTTCTTCTTTGTTTTGTCTCCATAGATTAATTTTATGTAACAAGTTCAATGATTTTGGGACTGAATCTCCGCGGT ATTTATCTGGAAAAATTTCTGTATACTATTCGTAGGTGATTTATTTTGTGATGTCTTTATCTCAGGTTATTCCAGAAGTT AGCAAAGCGAATGGAACCAAGTTACTTGTTAATGATAAAAGCAAGTATAAGTCCATGCTAATTAGGGCATATTCATCCAT TTGGATGATTGGGGGGTTTGCATTGATCATCTATATGGGTCACCTCTACATTACTGCAATGGTTGTTGTTATCCAAATCT TCATGGCAAGTGAGCTTTTCAATCTACTCAGAAGAGCTCATGAAGATAGGCAGCTGCCAGGATTTAGGCTATTAAATTGG TATCTATCACAAATTCATTAGGCTCACAGTGCGATTTGTTCTTTTCCTAAATGCCAAGATTCATTCATTTTTAAAAAAAA AGTAAAATTCATTTAATAACTTGTTACATTTTTCATTGGCATATGCCATTTCAGGCATTTTTTCTTCACTGCGATGTTAT TTGTTTATGGACGGATTCTGAATCAGCGTTTGGCTAACACAGTAACTTCAGACATGGTTTTGTATCGACTAGTGAGCAAT CTTATTAAGTATCATATGGTTATCTGCTACTCCCTGTACATTGCAGGTAACTTGTGCATATCATTTTTGTCTTGTTAATG TTCATTAGCTAGTGCTCGTGCAATGTCTCTATCAGGTGCCTGAGAAATTTCAAGCTTAGTTTCTACAATTGTGGTTTTAC TGTTAATTTTTATATAATCTAAGGATACTAATACTTTGGTTATCTTCCCTTTTATTGATTGGGCTCAGGATTTATGTGGT TCATTCTCACATTGAAGAAGAAGATGTATAAGTACCAATTTGGCCAATATGCTTGGACACATATGATTCTAATAGTTGTA TTTGGCCAGTCATCCTTCACTGTGGCAAGCATTTTTGAAGGGATTTTCTGGTAATTTAACTTATAAAAGAATATAATTAC TATTTTTTAACTATTCTAAAGAAACCTTCTTGGCTGTTTTTGGAGGATTCTATTTTGCTTGATAGCATACTTCATGGTAC TGTTCCTCATACACGTAGACAACTTTTTAAGCCAAGGATCAGATTTTAAGAATATTATGATGGTTGAGTGTTTGCTCAAG ACAAGATAGGGTTAGAAATACAATCATTAGAGACAAAGTTGGGGTAGCTCCCTTGCTTAGAAGATGAGAGAATTTCGTTT TAGATGGTTTGGATGTGTGTGGAGAAGACTAGTAGGAACTACAGTAAAGAATGTGCAACATATGGAGGATAGTTTAGTAA TAATATGAAGAGGAACTGATAAATGTTCAACATATGAAGATAAACTGTATCTCTGAATTTGATGTATGGTAGATCATTGT GGCGTTGTTTGATTCATGTAGCAATTCTAACCTTGTGGGAAAAGACTTAGGTGTTATTGTTGTATTTGACAGGTCTTCGA TGACATATTAATCCCTTAGAATAGTTGTACCTGTACGGCAGTACGTATTAAATATTTAGCCCACTTGTTGACTGAATCAT CACCCAGGATATTATCAGTTCTTGCCCAACCAGTGAAATTGGGGCCTTAAGATAGGGTTTGGAATTATGGAGAAAAGATA AGAGATTGAACCATGCGTGAAAATTTTCTACTCTGCGGGAGGTTACCTGATGAAGGTGTTCTCATCAAAGAGCATGACTA CTGGAGAACTGGTAAAGCTTTAAAACAGGATTACCTGCCCACATTTCAGAGTGCTGGGAACTGAGTTATAAAATGTATTG CTCTTTCAATTATGCAGATATTGAAACAAATGGTCTTTGAAAGTATGTCGGGCTTCCATTTGCATTCATAAGCATAATCT GAATTACTGAAGTGAACAATTAAACAAATGAGATAGGAGGTTTTGGATGATGTCCTATGATGTCCTTATGATCAGACTTC TCATCTTTATTATATGAAAAGTGCTCTATCTTAAGCGCCTTTTAGTATTTTGTTACCGTCACGAGTTTATTTGAAAATCT GATTTGTGAATATATGGAACTTAGAGGTTAAAGATCCGTGCATTTAGAAGATTTATTTAATATATCCGTGTATACCTTTC TATAAGCTTTATGAAGGTCTAAAGTTCAGCTGCATATTGTCATGTTTGATGACAATTGTGTAAAGTGATCATATTACCAT AGTTCTTGCTTAAGCTGACAAGTTATTCTTATAGTCCTACAGCTTGTGTATTTATTGCAAAAAACACAGTTATTTGGATC CAGTAATTGGGGTTATAGTGAAGCATGAAATGTGTCAATTGAACTTTAGAAGTTACAGGCTCTTGTAATATGCCAAAGCT TATATTTGGAAAGCTGCTTATTGATTTTATTTTCCCCTTTTTTTGCATTTTCTTAATTAACATCACCTGAACCCCTTATT CACACCTCAACTATATCTCCCATTTACTTTTGTATGGGTTGATTGTTGGTATTATTTAATTTTTTTCCCTTAATAAAATT CATATTGTTTACTGATAAGTGATAACAATGGCATCAACTTAAACTGCTAAGATTTAAAGTGATTTTTTGTATATGTATAT ACATCCTTTAATTCATTTCGCTAATATATTTAGAAGACTATTGCTTCTTTTATATGAATAAGACATTTATATGAATAAGA CATGTTGACTGCAGTGCACCATTGTTTTTTAATTGGATCGATGTTATGTTTTGCTTTTTTATTTAACAATTGGACTTATT GTACAGGTTTCTTCTTCCAGCATCACTTATTGTCATTAATGACATTGCTGCTTACATCTTTGGTTTTTTCTTTGGAAGAA CCCCTTTGATCAAATTATCTCCAAAGAAAACTTGGGAGGGTTTTATCGGGGCATCCTTTACCACCATTATCTCTGCATTT TTGGTGAGAACAATTTAAATTTGTTTATGAAGTTGCAGTAAATGGAAATGACTTTTTTTTGGGGTTTAATCGGGGCATCC TTTGTCATTGAACCAGAATACTTGGTGATGTTAAATATTCCTAGCACTGTACTATTATTAAATGATTGCAACAGCCTAAA TTAACTCTGAAAGCTTTAATGGCACTTAAAGTTCTTGCCTTAAATCTTTATACATCAGTCAACTTATTGTCAATTGGATC TTAATATTATTGTACAAAACTCTTTTTGTAGCTTGCTGACATCTTGGGTCATTCTCAATGGCTAACATGTCCAAGGAAGG TAGCTCTGTGACATACCATAACTCATTGATATATTATAAGACATTAGTATTCAACAACCAGCTAATGTTCATGTCTCTGG AAAAACACGCAGGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCAATGTTTAAGCCAGAATCTTACACTTTACC AGGATGGATTTCTCAGTGGGTAAGTATTGAACATTCAGGCTAAAATTTCCTGTAACTTGCAAGAATATCCACTAAACAGG TGTGAAACTTCAATACATGGATGTGAAATTAAATCGGGCTAAACAAGCACTAGTGAGGTTGAAAGTAGTTGGGTCACTAC TCAGATAGCTGTCATATGACTCGCACTCAAATCGGCTCAGTCATTAACTGTAGCCTATTTTTATTTTTCATTCTTGGATG AAAGTGTCATTAAAAAAGTATCTCTTATTTAATATGGAATTGGAAAACCAAAACTTCTACCAACCACTTCATGTTTTACA TGTTTTATTTCCAATTTACAGTACAGCTTATAAAACATGATCGTACTGTAATCTTGAAATGCCAATCCAGGTTCCTGGAA TTTCTGAAAAATCATAACTTGTGACATACTATGAGTTGTTCTATGCAGTTTGGTTGGAAAGAGGTATCAATCCTACCAGT TCAATGGCATGCTTTATGTCTTGGCTTGTTTGCTTCAATTATTGCACCTTTTGGAGGCTTCTTTGCAAGTGGTTTCAAAA GGGCTTTTAAAATAAAGGTATGCTCTCGGTACTTTTGTTTTTCTAATCAGGAAATGAGAAAATATTATCCATTTAGGTCA GGCATAAGGTGACAAAAAAAAGGTCAGGTATGAACAGATTTGCTGCGTGTTCCCATTTTTGCAGGACTTTGGTGATAGTA TTCCAGGACATGGTGGGATGACTGACAGAATGGATTGCCAGGTAGACTCTCTTGTTTCAATCTACAAATTTATTTTAATT TGGTCATATTTGACGGAGCTTCATCATAATATAGTGCGTTATGTGCTATATGTTTAGTGGAAGGAGCCTCATTGTCCCTA CTGAATGGACATTTAGACCCACTCTAACTGAAAAACTAGCAGACTGTTAATTCCAGTGCGAAGTCAAAATATCCTACGGA TTTTTGATGAACTTAACCAAACAAAAAAAAACTTCAATGACAAATAATCATGTGCAATTTGTAGAAGTCTCTTTTGTCCA GTCTAGTGATATGTCTGTTGCATATTGTCTAGAACAAAGTATGATCTAATATAACTGAGAATGGTTCGAGTTATTTATGC AGATGACCGTTTATCCACTTGTATTTTTTGTGCCTGTAGCTTATTTGTAGAGCCACAAAATTTCCTCCCTCACTACTTAT AAGTTATATCTTGTTGCCCTCATATGCATCCTGTTGCCTGTACCCTATTTTATCTTCTGTCTTATTCATTTCATTAGTCC ATGCTAGGATTGGAAGTTAAAACCATTGTTGATGTATAAGTCAAGCAGGATTTGACCGATTTGTCCTGATGCAGATGGTT ATGGCCGTGTTTGCGTATATATATCTTCAGTCATTTGTTGTGTCTCAAAGTTTGTCAGTTGAAACGATTTTGGACCAGGT ATTATGTTTATTTTGTTATATATATTACTCTGTACTTCTGTTTAATATTTACATCAAAGTTTTATATGCTTATGTTGCTA CCGCTGGTCGCTTCAGATATTAATGAACCTGACATTCGATGAACAAGAAGCTCTATATAGGAGGCTTGGGGAAATGTTGC AACAGGGGATTCAAAGGATGTCTTAG
CDS sequence (LotjaGi2g1v0074100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACAAGGATACGAGTACCAGTGCCCCATCAAATACAAGTGGTCGGATTAGGCACCGAAAACGATCGAATGAGGTTAT TCCAGAAGTTAGCAAAGCGAATGGAACCAAGTTACTTGTTAATGATAAAAGCAAGTATAAGTCCATGCTAATTAGGGCAT ATTCATCCATTTGGATGATTGGGGGGTTTGCATTGATCATCTATATGGGTCACCTCTACATTACTGCAATGGTTGTTGTT ATCCAAATCTTCATGGCAAGTGAGCTTTTCAATCTACTCAGAAGAGCTCATGAAGATAGGCAGCTGCCAGGATTTAGGCT ATTAAATTGGCATTTTTTCTTCACTGCGATGTTATTTGTTTATGGACGGATTCTGAATCAGCGTTTGGCTAACACAGTAA CTTCAGACATGGTTTTGTATCGACTAGTGAGCAATCTTATTAAGTATCATATGGTTATCTGCTACTCCCTGTACATTGCA GGATTTATGTGGTTCATTCTCACATTGAAGAAGAAGATGTATAAGTACCAATTTGGCCAATATGCTTGGACACATATGAT TCTAATAGTTGTATTTGGCCAGTCATCCTTCACTGTGGCAAGCATTTTTGAAGGGATTTTCTGGTTTCTTCTTCCAGCAT CACTTATTGTCATTAATGACATTGCTGCTTACATCTTTGGTTTTTTCTTTGGAAGAACCCCTTTGATCAAATTATCTCCA AAGAAAACTTGGGAGGGTTTTATCGGGGCATCCTTTACCACCATTATCTCTGCATTTTTGCTTGCTGACATCTTGGGTCA TTCTCAATGGCTAACATGTCCAAGGAAGGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCAATGTTTAAGCCAG AATCTTACACTTTACCAGGATGGATTTCTCAGTGGTTTGGTTGGAAAGAGGTATCAATCCTACCAGTTCAATGGCATGCT TTATGTCTTGGCTTGTTTGCTTCAATTATTGCACCTTTTGGAGGCTTCTTTGCAAGTGGTTTCAAAAGGGCTTTTAAAAT AAAGGACTTTGGTGATAGTATTCCAGGACATGGTGGGATGACTGACAGAATGGATTGCCAGATGGTTATGGCCGTGTTTG CGTATATATATCTTCAGTCATTTGTTGTGTCTCAAAGTTTGTCAGTTGAAACGATTTTGGACCAGATATTAATGAACCTG ACATTCGATGAACAAGAAGCTCTATATAGGAGGCTTGGGGAAATGTTGCAACAGGGGATTCAAAGGATGTCTTAG
Protein sequence (LotjaGi2g1v0074100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHKDTSTSAPSNTSGRIRHRKRSNEVIPEVSKANGTKLLVNDKSKYKSMLIRAYSSIWMIGGFALIIYMGHLYITAMVVV IQIFMASELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILNQRLANTVTSDMVLYRLVSNLIKYHMVICYSLYIA GFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSP KKTWEGFIGASFTTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVSILPVQWHA LCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYLQSFVVSQSLSVETILDQILMNL TFDEQEALYRRLGEMLQQGIQRMS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 422 | 422 | 5.6E-166 | ||
| PANTHER | 1 | 418 | 418 | 1.7E-248 | ||
| Phobius | 1 | 48 | 48 | - | – | |
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 418 | 418 | 1.7E-248 | – | |
| Phobius | 49 | 68 | 20 | - | – | |
| TMHMM | 50 | 67 | 18 | - | – | |
| Pfam | 51 | 381 | 331 | 7.1E-87 | – | |
| Phobius | 69 | 73 | 5 | - | – | |
| TMHMM | 72 | 94 | 23 | - | – | |
| Phobius | 74 | 93 | 20 | - | – | |
| Phobius | 94 | 104 | 11 | - | – | |
| Phobius | 105 | 126 | 22 | - | – | |
| TMHMM | 107 | 126 | 20 | - | – | |
| Phobius | 127 | 145 | 19 | - | – | |
| Phobius | 146 | 169 | 24 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 170 | 180 | 11 | - | – | |
| Phobius | 181 | 203 | 23 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 204 | 208 | 5 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 209 | 231 | 23 | - | – | |
| Phobius | 232 | 242 | 11 | - | – | |
| Phobius | 243 | 262 | 20 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 263 | 317 | 55 | - | – | |
| TMHMM | 316 | 338 | 23 | - | – | |
| Phobius | 318 | 338 | 21 | - | – | |
| Phobius | 339 | 424 | 86 | - | – | |
| ProSitePatterns | 339 | 365 | 27 | - | ||
| TMHMM | 371 | 393 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatidate cytidylyltransferase activity | Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi2g1v0074100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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