Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0075400 |
| Transcript ID | LotjaGi2g1v0075400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase family; TAIR: AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q8LB81|GDL79_ARATH GDSL esterase/lipase At5g33370; TrEMBL-Plants: tr|A0A151RJF3|A0A151RJF3_CAJCA GDSL esterase/lipase family; Found in the gene: LotjaGi2g1v0075400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19737935..19740423) extracted from Lotus japonicus Gifu genome v1.2.
GCAAACATAAATTTAACCTTTCAATTAAAGAACACCATAAAGCAACCTCCAATTCTAGTAGGATCTGCACAAAATCGTAG GAAATGATTCATTATATAAAGACTTGGAGGATCCTACTAAATCTTCCATCTACATCTTGCAGTCCACAATTGAGTTAAGT AACACACCAACCAACAGATCCAAATTAAGGTTTATTTTCAATGGCAACCTTGTCAACAAGTTTAGCTCCTTTGGGCATTC TTAGTTTAGTGTTAATAGTTGGAGTCATATTTCTCCCTACTGGGGCAGAAGCTAGGCCAAGGGCTTTCTTTGTGTTTGGA GATTCACTTGTTGATAGTGGGAATAACAATTACTTGGCTACCACTGCACGTGCTGATGCACCTCCTTATGGAATTGATTA TCCAACTCATAGACCAACTGGCCGTTTCTCCAATGGCTTCAACATTCCTGATCTTATCAGTTAAGTTTTCACATTTCATA TCTATAATGCAACATCTTGAACCCTTCTAATTGCTTCAACTTTCACTTTTTTAAGCCTTAGTTCTATTAAACCATAAAAG CCCAATGGGGGAAAATTTTATTACTCCCAATCCAATAGTATACTCAGTACTCTGAACCAACAAAAAATTTGTCCAACAAG TTTCATCATACACATTTTGTTGAACTTGGAAGTTCACACTCAAAATGTAATTGAAATCTCAGTACATTTTTTCCTTACTC TTTTTACACATTTGATCCCCTTTTTGTTCATGAAGCTCAACCTAGCACAATAAACCAAACATAGACACAAATGTTTAATT ATCTAACTAGTTGTATTGTTTCAGGTCAGAAACTTGGTGCAGAGTCAGCATTGCCATACTTGAGCCCAAGTTTAACAGGA GATAAGCTTCTAGTTGGTGCCAATTTTGCTTCAGCTGGTATTGGAATCCTTAACGATACCGGAATTCAATTTGTAAGTTC ATTATTTGCTAATTAACCAATTCTGATTTTTAATCACCCTAACCTTCATCTATCCACCTCATTTTTCTCTGTCTCTCTTT CGTTTGAAAAGTAATACATTAACATCCCAATCCCTTAAACAGAAAGAGGTAAAAAAATTAAAAAGAAAAGAAATATAATC AGTGATTCCATAGAAAAAGACATGATTCACATGCGTGTAACTAACTTTGAGATTAATGGATATACACTGTTAATGTAAAC AAGTTTTACATTGACATTCAATCATACACAGCTTAAACAAGTTCAACTTTTGCAGGTAAACGTAATTAGGATGTACAGAC AGCTGGAGTATTTTCAAGAGTACCAGAGACGATTAAGTGGTCTAATTGGAGCATCACAGGCTAAAAGACGTGTGAATGAA GCACTAGTTCTCATCACTTGTGGTGGCAATGATTTTGTAAACAACTACTACTTGGTGCCTGTTTCTGCAAGGTCTCAACA ATATCCACTACCTGCATATGTCAAGTTTCTAATCTCCGAGTACAAAAAGGTTTTGCAGGTAATTAATATGGTCATTACCA ATAATCATATTAGTTACACAAGGAATATGTATTTGCTAATAATTAGAACAATCAATTTTTGCAGAAGCTATATAATTTGG GAGCTCGCAGAGTTCTTGTGACAGGAACGGGACCTTTAGGTTGTGTTCCTTCAGAATTGGCCCAACGTGGCACAAATGGG CAATGTTCTGGTGAACTACAACGAGCTGCATCATTGTTTAATCCTCAGCTTGAAAGCATGTTGTTGGCACTCAACAGGAA ATTTGGCAGGAACGTTTTCATTGCTGCAAACACTGGAAAATCGCACAACAACTTCATTAGTAACCCCGCCCAATTTGGTA TAATCACCTGTCTCTCTACTACTACAATAATGTATTTGTTATTTACAATATGTTCCTTATGTATTAGAATTAATTTACAA AATATCGCACCATATTTTGTGGCCACATCACAAGTGTACAAATTTTAACTAATTTTCTAATTGATTAATGTAGTCATAAT TCACTAACATTTATTTTTATTGTTGGTTTTGGTCAGGTTTCAGTACAGCTAAAGTAGCTTGCTGTGGGCAAGGACCCTAC AATGGTATTGGACTATGCACAGCCCTATCCAACCTGTGCCCAAACAGAGACTTGCATGCATTTTGGGATGCATTTCATCC ATCTGAAAAGGCCAACAGGCTTATTGTGGAGGATATTATGTCTGGTTCTCAAAGTTACATGAACCCAATGAATCTCAGTA CCATCTTAGCTTTGGATGATTCTACCACATGATCAACAAGATACACTGACCCAATAAATCCAAGCACTAATTGTGTTGTT GGCTTGGATATATATGTGCTAGTTCATCAAGTCTCTTGTTGCTTTTTAATTATTATGTAATTGTAGTTTTGGTATTCCAC TATGTGCTGGAACCCCCCAACATAATTATGTTACAATCTTTTATCTTCCCCCTACTCTGTATCGTTCCAATTGAATCCAC CAATATAAT
CDS sequence (LotjaGi2g1v0075400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCTTGTCAACAAGTTTAGCTCCTTTGGGCATTCTTAGTTTAGTGTTAATAGTTGGAGTCATATTTCTCCCTAC TGGGGCAGAAGCTAGGCCAAGGGCTTTCTTTGTGTTTGGAGATTCACTTGTTGATAGTGGGAATAACAATTACTTGGCTA CCACTGCACGTGCTGATGCACCTCCTTATGGAATTGATTATCCAACTCATAGACCAACTGGCCGTTTCTCCAATGGCTTC AACATTCCTGATCTTATCAGTCAGAAACTTGGTGCAGAGTCAGCATTGCCATACTTGAGCCCAAGTTTAACAGGAGATAA GCTTCTAGTTGGTGCCAATTTTGCTTCAGCTGGTATTGGAATCCTTAACGATACCGGAATTCAATTTGTAAACGTAATTA GGATGTACAGACAGCTGGAGTATTTTCAAGAGTACCAGAGACGATTAAGTGGTCTAATTGGAGCATCACAGGCTAAAAGA CGTGTGAATGAAGCACTAGTTCTCATCACTTGTGGTGGCAATGATTTTGTAAACAACTACTACTTGGTGCCTGTTTCTGC AAGGTCTCAACAATATCCACTACCTGCATATGTCAAGTTTCTAATCTCCGAGTACAAAAAGGTTTTGCAGAAGCTATATA ATTTGGGAGCTCGCAGAGTTCTTGTGACAGGAACGGGACCTTTAGGTTGTGTTCCTTCAGAATTGGCCCAACGTGGCACA AATGGGCAATGTTCTGGTGAACTACAACGAGCTGCATCATTGTTTAATCCTCAGCTTGAAAGCATGTTGTTGGCACTCAA CAGGAAATTTGGCAGGAACGTTTTCATTGCTGCAAACACTGGAAAATCGCACAACAACTTCATTAGTAACCCCGCCCAAT TTGGTTTCAGTACAGCTAAAGTAGCTTGCTGTGGGCAAGGACCCTACAATGGTATTGGACTATGCACAGCCCTATCCAAC CTGTGCCCAAACAGAGACTTGCATGCATTTTGGGATGCATTTCATCCATCTGAAAAGGCCAACAGGCTTATTGTGGAGGA TATTATGTCTGGTTCTCAAAGTTACATGAACCCAATGAATCTCAGTACCATCTTAGCTTTGGATGATTCTACCACATGA
Protein sequence (LotjaGi2g1v0075400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLSTSLAPLGILSLVLIVGVIFLPTGAEARPRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDYPTHRPTGRFSNGF NIPDLISQKLGAESALPYLSPSLTGDKLLVGANFASAGIGILNDTGIQFVNVIRMYRQLEYFQEYQRRLSGLIGASQAKR RVNEALVLITCGGNDFVNNYYLVPVSARSQQYPLPAYVKFLISEYKKVLQKLYNLGARRVLVTGTGPLGCVPSELAQRGT NGQCSGELQRAASLFNPQLESMLLALNRKFGRNVFIAANTGKSHNNFISNPAQFGFSTAKVACCGQGPYNGIGLCTALSN LCPNRDLHAFWDAFHPSEKANRLIVEDIMSGSQSYMNPMNLSTILALDDSTT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| PANTHER | 6 | 368 | 363 | 8.1E-219 | – | |
| PANTHER | 6 | 368 | 363 | 8.1E-219 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 31 | 12 | - | – | |
| Gene3D | 27 | 354 | 328 | 3.6E-44 | ||
| Phobius | 32 | 372 | 341 | - | – | |
| CDD | 35 | 352 | 318 | 3.43531E-128 | ||
| SUPERFAMILY | 36 | 349 | 314 | 1.17E-5 | – | |
| Pfam | 37 | 347 | 311 | 2.0E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi2g1v0075400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…