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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0081800 |
| Transcript ID | LotjaGi2g1v0081800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PPPDE thiol peptidase family protein, putative; TAIR: AT4G17486.1 PPPDE putative thiol peptidase family protein; Swiss-Prot: sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486; TrEMBL-Plants: tr|I1JW53|I1JW53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:22376077..22378644) extracted from Lotus japonicus Gifu genome v1.2.
AAACTCCAAATTTCGTAAAAGAATGAATTGTAAAGAGCTAAATTCGGGTTTCTCGTTTATGTTTAAGGTTATGTTACAGT TGGAGCGAGTCACGTACATAATATGAAAATGAATGAAACCATTTATATATTTCCTTGTGTTTTGAAGATTTGCAAGGTTT CCTTCCGTTGCCCCCAATGAAATCATAGAGAGAGATAGAGTTGGATATTAATCCATTCTTCATCTCTGGAAAATGGGGAC AAAGAGCAACTCCAATTCCTCTTCTCATTCTAATAAAGCCAATGACACCAACACGCGTCTTGTGTTGAATGTGTACGATC TCACCCCTCTCAACAATTACTTATATTGGTTTGGATTAGGAGTCTTCCACTCTGGCATTGAAGGTTTGTTTCCGGTTTCC ATCATGTTTCTATTGTTTATTTTCATTCATTCGTCATTCTATAATGTTAATTGTTTTGATTTAATGTTACGCTTTAGAAG ATCCAAATCATCAAATATGTTTCCACTTGTAACCAAAAAAAAAAAATCATCAAATATGACCCTGGAATTTGAATAATCTT CTTGATTGAAGAAAATCAATGTTGGTTTTGGGCTAAGGTGAACGAAACATTGATTCAAACTAAATGCAAATACAAGTAAA ATATCGTGAGAATGAATATAAAAGGTTGATCTAGTCAATTTTAAGTAAGTGTCATGTGCTTCCTTAATAATTAGTTTTTT ATTTATTTCAAAAGCCTCTCTAGTCTGTTGGAGGCCAACATTGCAAATGCTGAGAATTTTGTTCGTGCTATGCTATCTGC AAGGATTGAGAATGATGTTTAGCTAGCTTAAACAATAAAACATGAAACCTAATATGTTTTATTTACCTAGTATTAAGGCT TAGGAGTTCTTTTAAATAACATCCACTTTTTGTGTTCTTGTTTGGCAAGATTGATGAAATTTTATGTCAAATTTATTCTG AAGATGCAAGAAAATTTTTCATACGCTTCTGGTGCATGCTGATGTTCTATATTGTTAGTGTTGTTTATATTTATTTTTTA CACTATTAATATGGGGAAATTAAAGCTTGTCTTTGTGTCTTTGAATAGTACATGGTAAGGAGTATGGATTTGGAGCACAT GACTACTCATCAAGTGGAGTATTTCAAGTGGAGCCAAGGAAGTGCCCTGGATTTATGTACAGATGTTCTATCACTCTAGG TCAAGTAAATATGCATCCTTCTGAGTTTCGAACAGTTGTCGAAAATTTGGCTAGTGAGTATCATGGGGATACCTATCACC TAATATCTAAGAACTGCAATCATTTTACCAATGATGTCTCATGCAGATTAATCGGAAAACGAATACCAGGTTGGGTGAAT CGGCTTGCTAGGCTAGGTAAGACCATAAAACCAAACTCAACTCGTTCAGTAGCAAACCAACGAGCAATTATTGGAGTTCA TTTAGTGTTTTGTCAGTAGATAAGCTTTGATAAGTCCATATCTAAACATGATATATTTACTATTCTGGTATCCAAATAAC CACACATAATACATGTTATAAAAGCACAATGAGCTAAATCCTAGTTCATAATCTTCGTCAAAATTTCAGGCTCTTTGTGC AGCTGTCTACTTCCTGAAAGTGTTCAAGTAACTACAGTTAAACAAGTACCTGAGTACCATGAGTGTTCAGGTGTATATAT ATTTTCTTCCGCATAATGTTTATCTTAATACATACTAGTTTTTCTATCTCAATAACTTGTGCAAACTATCTCTACTTCTC ATCTTGTTGATTGTTTGCAGAAGATGATGTTTCAGGGTCTCTTACTCCCACGAATTGTGAATTGGCAGAATTAGATGACG ACCATGAAAAGCGTCTTCTATCGCCCCTGGCTGGAAAAGATGATGTTTCTTTTGTTAAAGAGACGCGAGTAAAATGAATC CAACGTGTTTCCTTTAGTATTTTGTCCATGGATTTTCGCAAAATTTCTTGGTTTTCATTTGTTGTCTGAAGGTTTTTCTG TCTGGTCAGTGATTGTGTATTGGGGGAAAGAGGCAGTTTAGTTGCTTGTGTACTAGGGTCTTTATTCTTTAGAGTAATTG ATGGTACTCTTAGCCCGGTACATAACATCCATGCTCAGAAACTGTTGACATATGGACATTCTTTAAGAGTATATACGCCG GCCAGCTTGTTACAGATAGAAGACGACACATCACGTTCCAAGCATACACTTGGTACTAAATAGAGTATAAGGAAAGAAAT GACTCTGCAGGTCCCCACAGGTTGAGAAAACACTTATATTCTTTCTTTTATACTCATAGTCAATAGCAAAAACGTTTTAT GAAATCGTCAAAGGGAATTGGGAGGGAGGGTCATGTAGAATTCCCATGGCACACTTTTCCCTCCTATTTTCTGCTAGAAG ATTGCTTTTCAACATAAACAATAGCGAATGTCATGGGTCAACATTGATTGCTCATGGTTATATTTACATGTGAGAATTAT TGTATTTAGGAAACATTACATTTACTCCAATTCTTATTCCTTTCGTATATGAAGTATGAATTAGACTTAGCCATTGACCT GAATTCAC
CDS sequence (LotjaGi2g1v0081800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGACAAAGAGCAACTCCAATTCCTCTTCTCATTCTAATAAAGCCAATGACACCAACACGCGTCTTGTGTTGAATGT GTACGATCTCACCCCTCTCAACAATTACTTATATTGGTTTGGATTAGGAGTCTTCCACTCTGGCATTGAAGTACATGGTA AGGAGTATGGATTTGGAGCACATGACTACTCATCAAGTGGAGTATTTCAAGTGGAGCCAAGGAAGTGCCCTGGATTTATG TACAGATGTTCTATCACTCTAGGTCAAGTAAATATGCATCCTTCTGAGTTTCGAACAGTTGTCGAAAATTTGGCTAGTGA GTATCATGGGGATACCTATCACCTAATATCTAAGAACTGCAATCATTTTACCAATGATGTCTCATGCAGATTAATCGGAA AACGAATACCAGGTTGGGTGAATCGGCTTGCTAGGCTAGGCTCTTTGTGCAGCTGTCTACTTCCTGAAAGTGTTCAAGTA ACTACAGTTAAACAAGTACCTGAGTACCATGAGTGTTCAGAAGATGATGTTTCAGGGTCTCTTACTCCCACGAATTGTGA ATTGGCAGAATTAGATGACGACCATGAAAAGCGTCTTCTATCGCCCCTGGCTGGAAAAGATGATGTTTCTTTTGTTAAAG AGACGCGAGTAAAATGA
Protein sequence (LotjaGi2g1v0081800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTKSNSNSSSHSNKANDTNTRLVLNVYDLTPLNNYLYWFGLGVFHSGIEVHGKEYGFGAHDYSSSGVFQVEPRKCPGFM YRCSITLGQVNMHPSEFRTVVENLASEYHGDTYHLISKNCNHFTNDVSCRLIGKRIPGWVNRLARLGSLCSCLLPESVQV TTVKQVPEYHECSEDDVSGSLTPTNCELAELDDDHEKRLLSPLAGKDDVSFVKETRVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 218 | 208 | 8.6E-114 | – | |
| PANTHER | 11 | 218 | 208 | 8.6E-114 | ||
| Gene3D | 16 | 170 | 155 | 9.7E-33 | ||
| ProSiteProfiles | 21 | 158 | 138 | 53.839 | – | |
| SMART | 21 | 159 | 139 | 7.1E-51 | ||
| Pfam | 23 | 156 | 134 | 6.2E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0081800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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