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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0089900 |
| Transcript ID | LotjaGi2g1v0089900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isoflavone reductase like; TAIR: AT1G32100.1 pinoresinol reductase 1; Swiss-Prot: sp|P52581|IFRH_LUPAL Isoflavone reductase homolog; TrEMBL-Plants: tr|Q05JX8|Q05JX8_LOTJA Pinoresinol-lariciresinol reductase homolog; Found in the gene: LotjaGi2g1v0089900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:26373676..26376694) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGGCTTGAGGAACTGGAGAGGAGATAAGGGCAATGTGAATTAAGAGCAAGGTTCTTGTTGTGGGTGGTACAGGGTAT ATTGGGAGGAGAATCGTGAGGGCAAGTATAGAACAAGGGCATGAAACCTATGTTCTCCAACGTCCAGACATTGGGCTTGA TGTAGAGAAGGTGCAGATGCTGGTGTCCTTCAAGAAGCTAGGTGCTCGTCTCGTGGAGGCTTCTTTCTCCGATCACCAGA GTCTCGTGAATGCGGTGAATCTCGTGGATGTTGTGATCTATACCATGTCCGGAGTTCATTTCCGGTCTCATAACATTTTG ATGCAGCTCAAACTTGTTGAAGCCATCAAGGCTGCAGGGAATGTCAAGGTATATAGTTTTTGAATGTTGAAGCCATGAGG GAAGCTCAAACTTGTTGAAGCTATCAAGGGCATGTTTGATTATAGTTTTTAAAAACAGTTTTTTTTTGTAAACTTGTTTG CGTTTAAAAAACTGTTTTTAAAATCGATTCTCTATTTCAATTTTTTTTAAATTAAAATACCAGAACAGCTAAAAAATATT TTCTGCTTCACTTTTTAGTTTTCTTATTACAAAATGTTGGAAAACATCTGATTTAAACAGTTTTTTTTTTCTCTTGAAAA ACAGTTTTTAAAAATAGTTTATAAAGAATACAATTTTCAAAAATTGCAATCAAATAACCCTTATTCTAGATCTGTAGGAC TTGCATTTTCCTTGCCTTTTAGATTTTAAATATTAGACCTCAAAATTGGTTGGGCATATAACGTTGGGTATACGGTGGTA AAAAATGTTTGTTTGAACTATTAGATTGAGAAAGAGAGAGAGTTTGATTTGTAGGGATTGCACTAGCTAATAAATTCATC ACATCGGGTTAGAATTGCGAAAGATATTTAATAACATTAAATTTTTTTTATATTTACAATTAAATAATTTTTAAAAATAC ATATTTTTACGGATAATATATGCAGGTAAAACATATTTTTTCATTTTATCGAATACCCGTAAAATATTCAAATTGGCTTT AGCCTTTTTTACATAGAGTTAGAACTGATAGAAATTCTAAGATCTTAAGGTTTGTGGGTTGAAATGTATCCACCGTTTGA GTACCAAATAACAGGCATGGTACCAAACATTATTCAATCAATAAGAATACATTTGGTTGGCTCACTAAATAATACATTCT GACTTTTTCTTTTCTTTTCCTCTAGCGTTTTCTACCTTCAGAATTTGGCATGGACCCAGCACTCATGGGACATGCACTTG AACCTGGAAGAGTCACATTTGATGAAAAAATGACTGCGAGGAAAGCAATTGAAGATGCCAACATCCCTTTCACCTACATC TCTGCGAACTGCTTTGCTGGCTACTTCGCTTCTAACCTCGCTCAGATGGGTACTCTCTTCCCACCACGAGACAAAGTGGT TCTCAATGGTGATGGCAATGTCAAAGGTATCCAAAAAATCTTAAAATTATTAGTAAAACTATAATTTAATACTTTTCTTT AATGTCATCTTGTGTAAATTACAATCAGAATTTTAGTGTTTATGTCTGTTTGCACAGGTGCTAACGGATTACAGACAGAC AGTCACATGGTCTGATACAATAATTAAAGCATACTTAAATTAGTTATTTGTACTGGCTGTTATTAATTCTGTTGCAAGTA ATTACTAGCTAGTTAACATGTAGTTAGCTTGATCTGTTAGAAACAGTTAGCTTGGTAGTTGAATAATGACTTGTATATAT TTCATATATAGTGAATGAATGAAACTAGCTAGAAGGTCATTTCGAAATATTGATTCTCTTGTTAATTAAATACCTTGTAA TGATGATGAATTCACAATAAGCTGTTATTTGGTGCAGTTGTTTTTATGGATGAAGATGATGTTGCGACCTACACAATCAA GACGATTGATGATCCACGATCATTGAACAAGACAGTTTACCTAAGGCCACCAGAAAACATCCTCACTCATAGAGAGCTAA TTGAGAAATGGGAGAAGCTTATTGGAAAGCAATTAGACAAGTCCACCATGTCTGAACAAGACTTACTATCTTCCCTCGAA GGTTAAACAACAATGATATTGACACACTACTAGTTTCTCTTTTCATCTCATTTTAACTTGTTTTTTCTTCATATCTCTCC TTTTTCCTTATCACATCATCTATCATAATGTTTCTCAAATATCTTTCTTTTCTTCCTATCTCTCTCAATTTGATGGAGGT GGAGAAGTGTGAAGAATTCATTTTTCAAGTTAAAATGCACCCAATTTGCCCAAAATAAAATAATAAAAAAGAAGCACACC TAGAATATGTGTGTGGAGTAACCAAATTAAATGATTTAATAGAGTTACCGTTTCAACTCTTCGTCTTTTAAGCAAATGAT TGAGAGTTCGTTTCTCAACTCTTATAAATGGAAAAAATTTATCGGTCAATCTCATACCACTTAGTTCGCTGACTAGGGGC AACAGAAGACCGTCACAGTTATCTTGGTTAAGGGAAAAAAAGAATATGTATAAGAAGTATGTTTCAAAGAGTGTCTTTTG CTAGCATTTCAGTTTCCATGTGGGAGAATTAGATTTTTAGAGTAGTTCATACATATGTCAATAAATAATGACTCTTGATT TGTGTGATTTACTGCAGGTTTGGACTTTGCAAGCCAAGCGGGAGTGGGGCGTTTGTATCATATTTTTTATGAAGGGTGTT TGACAAACTATGAAATAGCAGAACATGGAGTAGAAGCGTCTGAGCTTTATCCAGAGGTGAAGTACACACGCATGGATATC TACAAGCTTATGTGTGATGAGATTATGTAAGCATGAAGAATAAAACAATTGAGGAGAAGGAATGCTGGTTATATTTGCAA GAAGTGATTTTCATTGACAATCGAGCCTGGAAGTTTTTGCAATCATTTTTTTTATACATAATCATGTATGCTTTAATAGT GAGCTTCTTTTATTTTTCATCTGAACTGAACTCCACAGAAAATTGACCTTATAATGGTG
CDS sequence (LotjaGi2g1v0089900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGGTGTCCTTCAAGAAGCTAGGTGCTCGTCTCGTGGAGGCTTCTTTCTCCGATCACCAGAGTCTCGTGAATGCGGT GAATCTCGTGGATGTTGTGATCTATACCATGTCCGGAGTTCATTTCCGGTCTCATAACATTTTGATGCAGCTCAAACTTG TTGAAGCCATCAAGGCTGCAGGGAATGTCAAGCGTTTTCTACCTTCAGAATTTGGCATGGACCCAGCACTCATGGGACAT GCACTTGAACCTGGAAGAGTCACATTTGATGAAAAAATGACTGCGAGGAAAGCAATTGAAGATGCCAACATCCCTTTCAC CTACATCTCTGCGAACTGCTTTGCTGGCTACTTCGCTTCTAACCTCGCTCAGATGGGTACTCTCTTCCCACCACGAGACA AAGTGGTTCTCAATGGTGATGGCAATGTCAAAGTTGTTTTTATGGATGAAGATGATGTTGCGACCTACACAATCAAGACG ATTGATGATCCACGATCATTGAACAAGACAGTTTACCTAAGGCCACCAGAAAACATCCTCACTCATAGAGAGCTAATTGA GAAATGGGAGAAGCTTATTGGAAAGCAATTAGACAAGTCCACCATGTCTGAACAAGACTTACTATCTTCCCTCGAAGGTT TGGACTTTGCAAGCCAAGCGGGAGTGGGGCGTTTGTATCATATTTTTTATGAAGGGTGTTTGACAAACTATGAAATAGCA GAACATGGAGTAGAAGCGTCTGAGCTTTATCCAGAGGTGAAGTACACACGCATGGATATCTACAAGCTTATGTGTGATGA GATTATGTAA
Protein sequence (LotjaGi2g1v0089900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVSFKKLGARLVEASFSDHQSLVNAVNLVDVVIYTMSGVHFRSHNILMQLKLVEAIKAAGNVKRFLPSEFGMDPALMGH ALEPGRVTFDEKMTARKAIEDANIPFTYISANCFAGYFASNLAQMGTLFPPRDKVVLNGDGNVKVVFMDEDDVATYTIKT IDDPRSLNKTVYLRPPENILTHRELIEKWEKLIGKQLDKSTMSEQDLLSSLEGLDFASQAGVGRLYHIFYEGCLTNYEIA EHGVEASELYPEVKYTRMDIYKLMCDEIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 261 | 260 | 1.1E-128 | – | |
| Gene3D | 2 | 250 | 249 | 7.2E-92 | – | |
| PANTHER | 2 | 261 | 260 | 1.1E-128 | – | |
| Pfam | 4 | 256 | 253 | 6.0E-52 | ||
| SUPERFAMILY | 4 | 211 | 208 | 3.29E-41 | ||
| Gene3D | 111 | 261 | 151 | 7.2E-92 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0089900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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