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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0097700 |
| Transcript ID | LotjaGi2g1v0097700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose transporter; TAIR: AT1G22710.1 sucrose-proton symporter 2; Swiss-Prot: sp|Q39231|SUC2_ARATH Sucrose transport protein SUC2; TrEMBL-Plants: tr|A0A072U9C3|A0A072U9C3_MEDTR Sucrose proton symporter 2; Found in the gene: LotjaGi2g1v0097700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:31960005..31965453) extracted from Lotus japonicus Gifu genome v1.2.
CCATCCCCCAGTATTCCTATAAATTCAAGAGAGCTCCCTCATTTTTCCCAAACTCATCTCCCCCCTCTCTCTCTTTCTCT CTCTCTCTCTCTCTCTCTCTGCAGGTTTCCACCACCATCACCATGGAGTCTCCCACCAAGAGCAACCACCTTGACACCAA GGGTTCCTCCCTTCAAATCGAGGCTCATATACCGCAACAGTCCAGCCCCCTCCGCAAGATGATCGCCGTGGCTTCCATAG CCGCCGGCATTCAGTTCGGTTGGGCCCTGCAGCTCTCCCTGCTCACCCCTTACGTGCAGACGCTCGGCGTCCCGCACATT TGGGCCTCCTTCATCTGGCTCTGTGGCCCTGTCTCGGGGCTCCTCGTCCAGCCCATTGTGGGGTACTACAGCGACCGCAC CACCTGCCGCTTCGGCCGCCGTCGCCCCTTCATTCTAGCCGGTGCGGTTGCCGTCGCCATCTCCGTCTTCCTCATCGGCT ACGCTGCCGATATCGGCCACTCCATGGGAGACGACTTAGCTAAGAAGACCCGCCCCCGTGCCGTGGCCATCTTTGTCTTT GGCTTCTGGATCCTTGATGTCGCCAACAACATGCTTCAGGTACAGGATTTCTAACTAACCTCTTCTTCCATTCATATCTT ATTTTATACATTACGTTACCTTCTATCAAGGTCTTAACTACACAAATCTTCTTCTAATAATTAAAATGAATGAGGCTAAA ATTATACTCTCTATATGGCAGTGTAGACCTCATAAGTCATCATTTTTGTGGACCAATTCAATTTGTTAAGCATCTAAATA GTAGTTTTAATCCACATATATATAACATCTATTTCTCTATTTCTTATATTTCATATATATGTTCTTGAGTTTTAAATCAT AAAACATGTTTCGTTCAACATCTCTGTCTACGAATGCAAAAGCTAAGAGAAGTTGCATTTAGCCATATTTATCTTGATTT CATAAACACTATAATAATTTGTATATGTGGTGGTCATGTAGGGTCCTTGTCGTGCCTTCCTCGGTGATCTTGCGGCCGGC GATCAAAAGAAAACGCGGACAGCCATGGGCTTCTTCTCGTTCTTCATGGCGGTCGGGAACGTGCTCGGATACGCGGCAGG CGCCTACAGCGGTCTCCACAAGATCTTCCCCTTCACAGTGACAGATGCCTGCCCGTCGTTCTGCGCGAACCTCAAGAGCT GTTTCTTCTTCTCCATCCTCCTCCTCCTAATTCTGTCCATCGCCGCACTCATCTATGTGGAGGACACCCCGCTCACCAAG AAACCGGCCGCTGACGTTGACAGCCCGGTTTCCTGTTTCGGGGACCTGTTCGGCGCGTTCAAGGAGCTGAAGAAGCCTAT GTGGATACTGATGTTGGTGACCGCCGTCAACTGGGTCGCGTGGTTCCCCTTCTTCTTGTTCGACACTGACTGGATGGGTC GGGAGGTGTACGGAGGCGCTGTTGGCGAGAAGGCGTATGATGACGGTGTCCGTGCCGGTTCGCTGGGGCTCATGATTAAC GCGGTGGTGCTGGCTTTCATGTCGCTGGCGGTGGAGCCTTTAGGGAGGATTCTTGGCGGAGTGAAGAACTTGTGGGGGAT TGTGAACTTCATCTTGGCTATATGCATGGCCATGACCGTGCTCATTACTAAGACGGCGGAGCATGACCGTTTGATCAGCG GCGGCGCCACCGTCGGTGCTCCTTCTTCCGGTGTCAAGGCTGGTGCCATTGCTTTCTTTGGTGTCATGGGAATCCCTCTC GCGGTAAATTCCTCTAATATCTTGTCACCTCATTTAAGTGGATATGATTGGATGAAATTTATTTTTATTTTTTATATATT TATGACTAACTCGTTCTTCTTTAAAGTGGCCAATTATTTTTATACATCGAAATATGAAAGTGGCCAATTAAAACATTGTT TTTTTTTCCTGTAAAAAATCTTTGTCACTTGACTTCACCAACTTGCTGACTGTTGTAGTGCATGTTTTTCTTCCATTTCA TAACGATTCATTACTCAACTTAAGTAGCAAGCTAGTGTTGGTAGGTGTTGGAAAGTAGTGCGGCCCCACTCATTGAACAA GTTTGAAATTGACTCTAGTTGGGTACATATTTTCCATGACATGTGTTTTCCTCACAATTATTTTCCTTTTTTATTTTTTA TCAAGTACTTCGAATATTATTCTTTCGTCTTTAGCAAATGAAATAACTTTTTTTTTACTGAATTTGATTTTCAAACAATT AATAGGAACTTTACATGTTTTTCCACTTCTTAATTTCTCTTTCACCCTTACCATTCGAATATAAATTTTTATTCTTAAAT TGTGTCTCATTTCTTATTTCAGTAAATGAAATTATGACATGTCAATTAAAAATTTATTTATAAAATATTTATAACTTTAT AATACGGGTTGTCTAAATGACCCATGGTAAAATTTGGATTAAATAACCCATGATCTAGGTGGACCAATAAAATTTAAGAT AAATTGGTTGAATTTTCTATATTTTATTAATTGATTTATTTAGAGTCAAATATGTTTTTGATCCCTAACTTATACAAATA ATCTAAAATGGTACCTAAAAAAAGCGCAAAGGTTTTAGGCCTTTGAATTATTTTTCACATCTATTTTGATCCCTCAAAAT TTTCTTCCCTTAAATTTAGTCCTCCTCCCCACACAATTATTTCAAAACCTAAAAATTCACCTTGAAATCATTGTCCAGCT TATGCAACCATGGGGTTATCAAAGAACGCAGCCATGGGTAACTTAACTATCTTATGCAACCCTTCGTGAATTCACCTTTT TATGTTTCATAAATTCATGGTACATCTGTATGAAATTGACGTGGTAATATTGTCTTTGCTAAGTACAAACGAGGAGGAGC AATCTATGGCAAGGTGAAGCTACGTGGTATTATCTTTGCTAAATACAAACTATGGCAAATACAAACCATGAGATATTTTT GTGGGACTGAAATAGATGTGAAAAAAATTAAGGACTAAAGCTTTTGTGTATTTTTGGGTACCATTTTATATTTATGTGTA TAAGTCAGGGACCTAAATCATATTTAACCCTAAATAAATTAATAAATAAATTTTAAAAATTCAACTAATTTATCTTAAAT GTGATTGGTCCACCTAGATCATGGGTTATTTAACCCAAATTCTACCATGGGTAATTTAGACAACCCCTTATATATCAGTT ATGAATTTTTAATTGACATTAAATAATTTCATTGTAAAATGCAATAAAATATCATTTTGACGTCTGAGTATCTTGATACT ATCTTACCTTATATTAATCTACCAAAAAAAATTCTTACCTTATATTTTAACTTTCCTCTGCATTTTCACCTAAAATTTGT GTGAAAAAACATTTTCCATTTAAAAGAACATAGATTTAGTGAATATAAATTTGTGTGAAGTATTTTTGTTTTTTCCGTTT TCCCGTAAAAAAAATTATTGTCACTTGACTTCACCATAACTTGCTGACTTGAGTGCAGGTTTTATTTTCCATTTGATTAA TAATTCATTATTCCACTTTTTGTATAGAAAATGTTTTTTATCTCCTAAGTAGTGTTGTAGGTGTTGTAAAAAGTAATGAT ATATACACACAGTGGCGGATGTAGCTTAGAGTGAGGGGGTTCAATTGAACCCCCTGGAAAAAAAAAATTGCACATAACCC CCCTAGCTATAATAATTATTTACCCTATATAATATTTTTTTGAACCCCCTGAAAATTTTAAATTATACTAGTAAACCAAG TTTTGCACCTATTTGCATAAAAAATTCACCTATTTGCACAACTATGACTTGTATAATTTCTGATGTATAAAACATGTTAA AGTTTTTTTAATTATATTTTTACCGATGTGTTCATTTAAAAAATTTGAACCCCCTGACCCCGGGTCCTAGATCCGCCACT GTATACACACCTCATCTTTTAAACACTTCATTTCCACCTATTTTTATTTCTACCTCTCTCCTATTATCATCTATCACATC TCATACTTTCTCTCTCTTACTTTTTCTTTTCTTCCTATCTCTCTCCTCTCCACCTCCTTCCACCTCAAAATGACCTCAAA ATGAGGTGTGAAGAAAACATTTTCCGTGTTGTAAAGTACTGCGGCCCCACTTAGTGAACATGTTTGAAAATCAACTGTAA TATTGTCATAGGTATTATATTTTCCATCACGTGTTTTCTTCACAATATTTTCCTCCTTTATCTTTTATCTTTTATCATTA TCATTGATTATTCATTTTTACATATTTTGATTTTCAAACAATTAATATAATGATTGGTTTTAAACTGAGAAGCGTGGGAA AAGTTTAAGAGCTAATGATGTGTGGCGCAGAAAACTAATACACCATTTGTTGTTCATATGTCCAGATTAATTTCAGTGTT CCTTTTGCTCTGGCATCTATATACTCCAGCGCTGCAGGGGCCGGTCAAGGTAAAGGATCTCAAAACTTATATTTATTGTT TTTTCTAAATGTATTTTTCTTATATTAAGTGGGTCAGTTATTATAGCCATGTAAATAAAATTGTGACATTTTTCCTCTAT ATAAAAAATTTCAGGTTTATCTTTAGGAGTTCTGAATCTTGCAATTGTCGTCCCCCAGGTAAAAATCAAAACCCTCAATG ATTTGTTCAAGCAAAACAAAACTATTGTTTTGGAGTTATTTGACTTATGGTCTATAACATGTATATATGCAGATGTTAGT GTCAACATTGAGTGGACCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGGTGGGTGCAGTGATGGCTG CCGTCAGTGCCATAATGGCAATTGTCTTGCTGCCGACTCCGAAGCCCGCTGATGTGGCCAAGGCTTCGAGTCTTCCCCCA GGCGGCGGTTTCCACTGATTTTGAAGGAGCTTCTTCCATGCTTAATTTTATTTTTGTTTCCTGTTTAGAAATGTAAAATA GGAGAAGGAAAAATGGATATGTTTTGGATTTGGAAGATGTTGTATTAGATATATTAGTCCATGGCTACAAATACCAATAC ATGTATTGTATTCTAGCATGCATCACCGAACCGAATCCTATTAATTGTAAAGTTTGGTGTGGTTAATATAAGACCGTCCT GTGGTTGCAGGACCCATCCCCTTATTTGTGTTTATTCAGTGGTGATGCTTGGTTCAATCAAATGGATACTATGTGGTGGG GTAAAGTTTGGGTCTCCCTTGCTCTTTTTTATTTTCACTTTTTTTCTCTTACAGTTGGTAGTCATAACATTATATCCATC ACCCACAGTTGGCGCACTAAACTTTAATTCGTAGGGGTTTGACCAATAAGAATGTAAGTCTTAACGATTTTTTTTTTGTA AAAACACAAATTATTACTACAATTTTCTTGCACTTGCACCATATTTTTCTTCCGACTCAAACCTATGAAGATGTTGAGTT ATAACGCCA
CDS sequence (LotjaGi2g1v0097700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTCCCACCAAGAGCAACCACCTTGACACCAAGGGTTCCTCCCTTCAAATCGAGGCTCATATACCGCAACAGTC CAGCCCCCTCCGCAAGATGATCGCCGTGGCTTCCATAGCCGCCGGCATTCAGTTCGGTTGGGCCCTGCAGCTCTCCCTGC TCACCCCTTACGTGCAGACGCTCGGCGTCCCGCACATTTGGGCCTCCTTCATCTGGCTCTGTGGCCCTGTCTCGGGGCTC CTCGTCCAGCCCATTGTGGGGTACTACAGCGACCGCACCACCTGCCGCTTCGGCCGCCGTCGCCCCTTCATTCTAGCCGG TGCGGTTGCCGTCGCCATCTCCGTCTTCCTCATCGGCTACGCTGCCGATATCGGCCACTCCATGGGAGACGACTTAGCTA AGAAGACCCGCCCCCGTGCCGTGGCCATCTTTGTCTTTGGCTTCTGGATCCTTGATGTCGCCAACAACATGCTTCAGGGT CCTTGTCGTGCCTTCCTCGGTGATCTTGCGGCCGGCGATCAAAAGAAAACGCGGACAGCCATGGGCTTCTTCTCGTTCTT CATGGCGGTCGGGAACGTGCTCGGATACGCGGCAGGCGCCTACAGCGGTCTCCACAAGATCTTCCCCTTCACAGTGACAG ATGCCTGCCCGTCGTTCTGCGCGAACCTCAAGAGCTGTTTCTTCTTCTCCATCCTCCTCCTCCTAATTCTGTCCATCGCC GCACTCATCTATGTGGAGGACACCCCGCTCACCAAGAAACCGGCCGCTGACGTTGACAGCCCGGTTTCCTGTTTCGGGGA CCTGTTCGGCGCGTTCAAGGAGCTGAAGAAGCCTATGTGGATACTGATGTTGGTGACCGCCGTCAACTGGGTCGCGTGGT TCCCCTTCTTCTTGTTCGACACTGACTGGATGGGTCGGGAGGTGTACGGAGGCGCTGTTGGCGAGAAGGCGTATGATGAC GGTGTCCGTGCCGGTTCGCTGGGGCTCATGATTAACGCGGTGGTGCTGGCTTTCATGTCGCTGGCGGTGGAGCCTTTAGG GAGGATTCTTGGCGGAGTGAAGAACTTGTGGGGGATTGTGAACTTCATCTTGGCTATATGCATGGCCATGACCGTGCTCA TTACTAAGACGGCGGAGCATGACCGTTTGATCAGCGGCGGCGCCACCGTCGGTGCTCCTTCTTCCGGTGTCAAGGCTGGT GCCATTGCTTTCTTTGGTGTCATGGGAATCCCTCTCGCGATTAATTTCAGTGTTCCTTTTGCTCTGGCATCTATATACTC CAGCGCTGCAGGGGCCGGTCAAGGTTTATCTTTAGGAGTTCTGAATCTTGCAATTGTCGTCCCCCAGATGTTAGTGTCAA CATTGAGTGGACCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGGTGGGTGCAGTGATGGCTGCCGTC AGTGCCATAATGGCAATTGTCTTGCTGCCGACTCCGAAGCCCGCTGATGTGGCCAAGGCTTCGAGTCTTCCCCCAGGCGG CGGTTTCCACTGA
Protein sequence (LotjaGi2g1v0097700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESPTKSNHLDTKGSSLQIEAHIPQQSSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQTLGVPHIWASFIWLCGPVSGL LVQPIVGYYSDRTTCRFGRRRPFILAGAVAVAISVFLIGYAADIGHSMGDDLAKKTRPRAVAIFVFGFWILDVANNMLQG PCRAFLGDLAAGDQKKTRTAMGFFSFFMAVGNVLGYAAGAYSGLHKIFPFTVTDACPSFCANLKSCFFFSILLLLILSIA ALIYVEDTPLTKKPAADVDSPVSCFGDLFGAFKELKKPMWILMLVTAVNWVAWFPFFLFDTDWMGREVYGGAVGEKAYDD GVRAGSLGLMINAVVLAFMSLAVEPLGRILGGVKNLWGIVNFILAICMAMTVLITKTAEHDRLISGGATVGAPSSGVKAG AIAFFGVMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGGNLPAFVVGAVMAAV SAIMAIVLLPTPKPADVAKASSLPPGGGFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 5 | 510 | 506 | 8.1E-284 | – | |
| PANTHER | 5 | 510 | 506 | 8.1E-284 | – | |
| Gene3D | 26 | 489 | 464 | 2.0E-23 | – | |
| TIGRFAM | 29 | 493 | 465 | 6.6E-229 | ||
| SUPERFAMILY | 32 | 494 | 463 | 4.58E-30 | ||
| Phobius | 33 | 54 | 22 | - | – | |
| CDD | 33 | 486 | 454 | 1.52743E-122 | – | |
| TMHMM | 36 | 58 | 23 | - | – | |
| Pfam | 40 | 292 | 253 | 1.4E-15 | – | |
| Phobius | 55 | 65 | 11 | - | – | |
| Phobius | 66 | 90 | 25 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 91 | 101 | 11 | - | – | |
| Phobius | 102 | 120 | 19 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 121 | 139 | 19 | - | – | |
| TMHMM | 140 | 158 | 19 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| Phobius | 159 | 178 | 20 | - | – | |
| Phobius | 179 | 201 | 23 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 202 | 226 | 25 | - | – | |
| TMHMM | 226 | 245 | 20 | - | – | |
| Phobius | 227 | 245 | 19 | - | – | |
| Phobius | 246 | 278 | 33 | - | – | |
| TMHMM | 279 | 301 | 23 | - | – | |
| Phobius | 279 | 299 | 21 | - | – | |
| Phobius | 300 | 323 | 24 | - | – | |
| TMHMM | 321 | 343 | 23 | - | – | |
| Phobius | 324 | 343 | 20 | - | – | |
| Phobius | 344 | 354 | 11 | - | – | |
| Phobius | 355 | 374 | 20 | - | – | |
| TMHMM | 356 | 375 | 20 | - | – | |
| Phobius | 375 | 400 | 26 | - | – | |
| Phobius | 401 | 423 | 23 | - | – | |
| TMHMM | 401 | 423 | 23 | - | – | |
| Phobius | 424 | 434 | 11 | - | – | |
| TMHMM | 430 | 452 | 23 | - | – | |
| Phobius | 435 | 456 | 22 | - | – | |
| Phobius | 457 | 467 | 11 | - | – | |
| TMHMM | 467 | 489 | 23 | - | – | |
| Phobius | 468 | 489 | 22 | - | – | |
| Phobius | 490 | 510 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Sucrose transmembrane transporter activity | Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane. | ||
| Biological process | Sucrose transport | The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside. |
Expression pattern of LotjaGi2g1v0097700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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