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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0104000 |
| Transcript ID | LotjaGi2g1v0104000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TAIR: AT3G26780.1 Phosphoglycerate mutase family protein; Swiss-Prot: sp|B0UBD4|GPMA_METS4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TrEMBL-Plants: tr|I1JCZ4|I1JCZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0104000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:34878952..34885716) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTAGCTCAAGTGCATGATAAGTCAAGTTTCAACACGATAAAAATTCTCAACCAATGACCATTTGAAAAGAGGCACAC AAGAGATCTACATCTCTTCATTTCCTTTCAGTTCATCCACTTTTCCCCTTATACAAATCATCCTCTAAGATCTTGAAACT TGATGCCAAAAAACATACCCATACTATAACTGATCTTCATCTTCTCCAGATCCTATAATTCCCCCTCTTTTTTCAACTAA CATCAAAATCGTTTTCCTTTTTTTCTTCTTACACTTAGAAATGAAACACAAGTTCTGCTAAACTCGAATCTGAGCAATAA CAGAGTTTGAAACTTCAATAAAGGATCTGCGACGTCGTTTGATCTATAATGGGTGCGAACCACTCATTGGAAGTGGTGGA AGACAGCGACGAAGAAGAGGAACAAGAAGAAGAAGAAGATGAAGATGAAGAAGAAGAGAGGAACATCAACGGCCACATGG TTGAGACCCAATTGGGCAACCACGTCGTGAAGAAGGTTCTGGAACAAGAGCCGGAGATGCTTCCGTGTCACGCGTCGGCT TCTCCGCTGTCTCCGCAGCTTTCCTCTCTCGGAACGCCGCGCCTGGGGCCCTCCATCAAGGTCTGGGACCCTTACAACGT TCTCGCTCCGCCGCCTTCGCCGCCGCCGGCGGTGTTTTCGCGGAGCTTCTCGGGGAACGGGATGGTGGACGATGATGTTA CGGAGGTCTTTCTGATCAGCCACGGGGAGTGTGAGTTGAATCTGGCGCCGGAGTTGGTGGCTGGACGGTGCCCCGCGGCG GCGCTCACGGCCAACGGGAAGCGGCAGGCCCGGGCACTGGCCGTGTTTCTCAAGTCTCAGGGGGTTCGGTTTGGTGCCGT GTATTCATCGCCGTTGGATCGGGCACGGTCAACTGCAGTTTTGGTCTGTAAGGTAAGTTTCCTCTTTTGTGCGATGAAAT TTTTCGTTCTTCCATTAAAATAATGACATATGATATGCATGATTAATTTTTTCTTTTCTATTTTATGAGAAAGTGAGAGA AAACTGCTAAATGAAAATAAGGTCTATGTGCTTCAGAAGAACCTACAGTTTGTTCATTTGTTAAATGCTCTGAATTGAAG CAAATAAGGTCTATGTGCATTGATTGTGCTGGTTGGATTGTCTTATGTTTAAATAGTGGAAGTTGAGGGGGGGAGGGGGG GGGGGGGTGTTTTGAAGAGCTTTTCTTGAGCTTAGTTGAACTTATCTTTTGCTAAACTTATGTTTAGTTAAACTTATAAA AATAGCTTACGACATAGATGTGCATAGACGCATAGCAACTTTGTTATGGATGTCCAGATTTTGATCATTGCTTTACCTGA ACATTGAGTATTTTTGTTGTTGTTATTTTACTATATTAGCATGTTTTACTTTGTTAGGGCATCTTCCATTTGCATAATTT GCATCTCTTAATTGATGGTTACATGTCATGATATCATTTGTTGATTGAGGTGATGGTTACCATTGTAGTATGTTCTATAG AACTGTTAGGATTTTAAATATCCTAACACCAACCACAAGTGAAGGAAGAGAAAAAGCGATAATTGTTTTGGTATTTTATT TTTTAGATCATGGGAGAAGTTATCTTTTGCGAGTATCCTCTGACCAGTCTTGTTGCTTTTCACCTACATTTATGGAATTG ATATTGGCCACACCCTATTTTGTAAACATTTCTAACCCATTTCAGCCTCCCTATGCCTAGTAGTTAAATTTTTTTTTGAA CTTTCCATACATACTGTAACCATTGCACGCGAATGTCTATTTTGATCCTCCAAACATATATTTGAGTTCATATTGGTCCT CCATTAACAAATACATCAAGTTGGTTCTCTTAATGCCCATTTTTGCTATTAAAATGTTTTTATGGAGTGAATTAATTGTC ATTGATGGTGTCATTGATAAATGGAAGACCAATGTGATGTCATGTGTTATGTGTATTTGAAGGACCAAAATGTGTAATTT ACTCTCTATTCTTTATAAAACTCATCTGAACATTTTCCCTTTTCAATTTGCAAAAAAGGAAAAGAAAAGTGGATCCTATT GCGCTCTAAGATTGATATTAGGTGGGTACATAAAAATAGCAACCTGGTTCTATATATTGTTCCTGCTGTTGCGGGGTCCT GCAGTGGTTGGCAATCTTTCCTTACATTTACAAGGGTCTGATTCTGTTAATTGAATTTGTGATATCCAAGTCTCATGGTA GCAAGATAGATCCTTGTGCGACAAAATAACATATGAGCACTTATATGAGTAAAAATTATGGAAGTTATTCTCCATTTAGT CAAAGTAGGATGTAAAAAGAAAGAAACTAGTCAAACTACTAAACCTCAAATAGGAGCCATGGTTTTGATGCAAGGCACTA AATAATCTTGTTCAGGAAAATGTTATTTCCAGTCCAGCATAGAATTGATGGCAGGCATTTCTGACACTCAACCCTAATTA GGAATGTTTAAATGAGGAGAGGGCGTAAGCATGGGCCTGGGATCAAGTGGGCAAGCTAGTTAGGCCTTGTTAATTGAGAG CAGTCTTTATTAGCTGTTATTAATCTGTTATAGATCAAGGCAGAGAAGGTAGAGGGAGTATGGTAGTTAGTTAGTGATTT ATGGAGGGAGAGACCAGACTCTTGAATCCTGCAGTTACAGTTTTGTGGTAGTTACTTCTCTTCCTGATCTGGGTGCTCTT TTGATCCATGGCTAAAGAAGGACTCATCAATTGAAGTCTACCATTCTCTGGATCAGTTATTTGTCTTCTTGAGCTGGATT TTGTCCTATTCTCTGAACCAGCTTTATTAGCTGGAATGAGAGCTCTAAATCCAAGGAATTCATTGTCTTATAAAGAACTG AGAAGAAACTGCTTGAAAATTTGAGGAGGGAGCCTGTAAGGAGGGCAAGTATAGGGATTCTAGGATTTCAAAGTCAATAG TTCGTATAGGTGGTTGATTCACCTTAAAAAGCACTTTGGCTGCCATAAAGAAGTGATGGATGGAGAGTTGCAGCTGGCTA TAGAAGCACCCTAAGCATGTGTTTATCATTGTTGCCTGTGAAAATGAAGGATAGCAATCCCAAAGCAACATGGGGAAGCT TCTACGTTTATGTTTGGTTGAGTTGATTATCCTTAAAACCTTGGTTTTGGCAATAGCTAAGTTATAGCTTTTGCCAAAAC CATGATTTGGGAGATCCCCGATTTGAAACCGAACACACTATAAAAGGTTGTTCCCAATCACTTTTAACTGTGTCAGACAT GCCAGTTTGGGTAACTGATTCAGAATTGGAAAATTCAGAAAAAAAAGAAGAGAAATGAAGGTTTGAAGTTGAAGGCTATA TGAATCAAAAACATGGCCTGAAGGCAAGAACAATGTTAAAAGCAGCTAGCATTAAGGCATATAATTGGATATAGTGAAGG AAAATCCTCATCGGCCAATGGCGAAGGACGAACAGAGGAAAAACAAATTGCAGAATAGGATGAACATAAGCCATGAAGAA GCCACTCAAGCACTAGAAGGAGAAATTGTAATCAAGATGAAAGAATGAGTTGATGTCTGATCCAAGTTGCAGAAGACCCT TGGTTTTATCCGCTACAAATTCTCTGGTACCATATAGCCGGATCTGATGTCTAGAAACGGAGATCAACCCCTTCCAGTAA TGTCAGAAATCAACCACTGAAAATTGCTGATGCAATTTATTTATCAATGTGAATGCAAACAAGCAACTTTCGTTACTTCT GGTGCCATATAGCCGGATCTGATGTCTAGAAACGGAGGTCAACCCCTTCCAGTAATGTCAGAAATCAACCACTGAAAATT GCTGATGAAATTTATTTATCAATGTGAATGCAAAAATAAGGTGAATAGGTGATTTCCAATTTACTCCGGGGTGTGCCATA TTGGATCTTTACTAAACATCTATTTTTTTCAAGGCATGATAGGTGATCCTTACATAATACGGAAAATATGATTTCGGATC ACAGTCATTTAATCCTTTATGGGAGAGCTTATTTCTGTTGAAGCACTAAACATTGAAGTCCTATATGAAAATAATCTGGA AGAAGATTGTGTTTGCTGCCCTTGGAATTCCTTCTACTAGTCTTTCCAAAGGGAGGTCCTTTGATTGTTCCCCACATTCT GTAACTAGTCATACAAAGAAAGGCGATCTTGAAGAAGTGGCAGAGTTGTGTAAGTTTCCAAGCTTTATAGGCTGATTCTA AAGCTTCAGTAACTGATCCTGTTGCATTTCATGTAAATGAAAGAGCTATTACTGTCCGTATGGATTGGAGCCTGAGTAAA ATGCAGGTTATAACTGTGAATTCTGTTGATATGTTAGTAAAGAGGAATGGTTCTGTAAAGACTTAAGCAGTAGACCTTTA TCAATCTGCTGGAGACTGGAAGAACCTTTTGGCCAGGTTGATGTGATTATTAAGAACACAGCCTTGATTGATGCCTTGGT TCTGAATGAGAATGCTGCTATCCTTTCGCATTAAAATGTGTTTCATGGAGAGTGGTGAAGGTGTCTTTATAATGGTTGGG AAAGTGTACAATCCACTCTTACAACTACAGATCATGAAATTGCTGATGAATCTCGAGTACCTGATGTATAGGATTGCACT GATACAAATCCAGATTCCTGTAGTATCAAATTTCAGCAAACGGACATGATGTGTAGAAAAACTTGAACACAACAGACTTA ACAACAGTATGAAGCCAAAGAAAATAGAGGTATTTAGTTGGTCAGTAACTTGTGGTGGGGACAGGCTCTTCATGTTGATG ACAGTTTTACGGTCATTCTTTTACTTTGTAACTTGTGGAGGGAGACAGGCTCTCCATTGATCTAGGGCTAAAGAAGATCA TATGGATAAAATTCTACCATTCTCTTACAAATTTTTTCGTACTCTCTGAATCAGTTCTATCTGGAATGACAAAATTGATA TGGATGCTTTTGTGGGGCGCAGCCGCAAATAATATCAGAAACGCGGCAGAACTAGTTTCCCTAATTAATAAGGAAAATAT TTGATTTTTTTTATTGTTTTTATACTGTTTAGTAGTTGCAGGTTATTTTTAGAAGCATATTTTCAATATTTTCAATTTAT GATCTCTTTCTTTGTTAGCTTGGATCTTATGATTTCTTTCCTAACTTTCTGTGTTAAATTCCTTTAAAAAGGGATGCCAG TATTCAATAAATAATAGCAATCAATTAGTCTTTAAATTAGTATACAACTAGATGGGGCTCTGTCAAGGATGAGTCTACTT CTCTTGTTCAATATAATGTCACTAGAAGGAGACCTGTGAGTAGGTCCTGTCCTAAGGTTCATAACAAAAATCAACTCCAG AAATCAGTTTTCCTGAATCTGTAATGCTTCAAGGGAATTTGGCAGTACTAGTATTTCCTTATACTCTATATTAAGAGTGC GAGACCTCATAAATCACACTGAAAGATGGTATATATAAAGGCAGAGATGTGTTTGTACGTATTTGTAGCTTGTAGTAGTA GCATTGAACTCCATGTGTCTTTGAATTTCCCTTCCTTTGATTGCGTCGCTGCCTGTGAGAAAAGGATTATTTATGTTTCA GAATCTCATGTATGAAATCTTACTGTCTTGAGTTTCCTTGGACCAGGAAGTAAATTTTCCGGAAGACCAAATTCAATCCT CAGATGCTCTTACTGAGATTAGTCAGGGAAGCTGGGAGGGCTGCCTTCGTTCGGAAATATATACACCTGACGTTCAGGGC TGGATTGATCGGTTCCAGCCGGATTTTACTGCACCTGCTGGAGAATCACTTCGACAAGTGGAATTCCGGATGATCCACTT CTTAAATGACACTGTCCTGGGATTACATGAAAAATTGAGATCAGTTTTATCATCACATCAAAATGACAGCCAGGCATTTG CTCAACACAATTCCCATGCCCTTTCAAACTCAACACATGACCCAGATGGACCTTCTCTCCATCCGAACCAATGGGATTCG CCCAACAGGCATCACCGACCCGCCTTCTCGAGGAAAAAATCCGGTAAGAGCAGGCTGCAATTTATGACAACCACCGGAGA CGAGGTCGAAGATGAAGTTCATTCCAGCAACGTAAACCACCAAATTTCGCTGCACAATTCTAGTTTCAGCAGCTTTTCAC CATCTGTTTCTTGTATAGGACTATTTACACATTCTGTGCCAATTAAGTGTCTCCTGACTGGCCTTCTTGGATGTAGCCCC TTGATGTTACACAAGTTCTGCATTGAAGACTCTTCAGTGACTGTGTTGCAGCATTCTGTGAGAACTGGTTGGCAGATAAA AAGGCTTAATGATACAGCGCACCTCAGGATTCTCTAACCAGAGGAACTGTACTCAAGCAATTTGAATTTTTGTCGTTGGG GGATTATATAAATTTAGGTTTGCGTGTTGAAACACATTAGCTCACAAGAATTGACGCCTTTCATTGTAACCTTTATTTAT TTTTGCACTGGTCAATTCCGAAAGAGGAATGGTGCAGGAATTGGATTGCTGTATCAATTTTTTTACTTTCTATAATTACT TAAGTATTTTAAATTCAGACAAAAAGAAAATGTTTAGTTATTGAATGAAGTATATTAAATTAGTAGTTTGCAAATTTAAA TCTAGAAAGAGGAGGTAGGGAGACTCGATCTTTGGTGGATAAAGAGGAAGGAATGAAAGTAAGGTAGTGATTGACCCGAC TTATTTTTGACTTTTAAGTTATTTTTAAGAAAAGTTGAGCTAAAC
CDS sequence (LotjaGi2g1v0104000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGCGAACCACTCATTGGAAGTGGTGGAAGACAGCGACGAAGAAGAGGAACAAGAAGAAGAAGAAGATGAAGATGA AGAAGAAGAGAGGAACATCAACGGCCACATGGTTGAGACCCAATTGGGCAACCACGTCGTGAAGAAGGTTCTGGAACAAG AGCCGGAGATGCTTCCGTGTCACGCGTCGGCTTCTCCGCTGTCTCCGCAGCTTTCCTCTCTCGGAACGCCGCGCCTGGGG CCCTCCATCAAGGTCTGGGACCCTTACAACGTTCTCGCTCCGCCGCCTTCGCCGCCGCCGGCGGTGTTTTCGCGGAGCTT CTCGGGGAACGGGATGGTGGACGATGATGTTACGGAGGTCTTTCTGATCAGCCACGGGGAGTGTGAGTTGAATCTGGCGC CGGAGTTGGTGGCTGGACGGTGCCCCGCGGCGGCGCTCACGGCCAACGGGAAGCGGCAGGCCCGGGCACTGGCCGTGTTT CTCAAGTCTCAGGGGGTTCGGTTTGGTGCCGTGTATTCATCGCCGTTGGATCGGGCACGGTCAACTGCAGTTTTGGTCTG TAAGGAAGTAAATTTTCCGGAAGACCAAATTCAATCCTCAGATGCTCTTACTGAGATTAGTCAGGGAAGCTGGGAGGGCT GCCTTCGTTCGGAAATATATACACCTGACGTTCAGGGCTGGATTGATCGGTTCCAGCCGGATTTTACTGCACCTGCTGGA GAATCACTTCGACAAGTGGAATTCCGGATGATCCACTTCTTAAATGACACTGTCCTGGGATTACATGAAAAATTGAGATC AGTTTTATCATCACATCAAAATGACAGCCAGGCATTTGCTCAACACAATTCCCATGCCCTTTCAAACTCAACACATGACC CAGATGGACCTTCTCTCCATCCGAACCAATGGGATTCGCCCAACAGGCATCACCGACCCGCCTTCTCGAGGAAAAAATCC GGTAAGAGCAGGCTGCAATTTATGACAACCACCGGAGACGAGGTCGAAGATGAAGTTCATTCCAGCAACGTAAACCACCA AATTTCGCTGCACAATTCTAGTTTCAGCAGCTTTTCACCATCTGTTTCTTGTATAGGACTATTTACACATTCTGTGCCAA TTAAGTGTCTCCTGACTGGCCTTCTTGGATGTAGCCCCTTGATGTTACACAAGTTCTGCATTGAAGACTCTTCAGTGACT GTGTTGCAGCATTCTGTGAGAACTGGTTGGCAGATAAAAAGGCTTAATGATACAGCGCACCTCAGGATTCTCTAA
Protein sequence (LotjaGi2g1v0104000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGANHSLEVVEDSDEEEEQEEEEDEDEEEERNINGHMVETQLGNHVVKKVLEQEPEMLPCHASASPLSPQLSSLGTPRLG PSIKVWDPYNVLAPPPSPPPAVFSRSFSGNGMVDDDVTEVFLISHGECELNLAPELVAGRCPAAALTANGKRQARALAVF LKSQGVRFGAVYSSPLDRARSTAVLVCKEVNFPEDQIQSSDALTEISQGSWEGCLRSEIYTPDVQGWIDRFQPDFTAPAG ESLRQVEFRMIHFLNDTVLGLHEKLRSVLSSHQNDSQAFAQHNSHALSNSTHDPDGPSLHPNQWDSPNRHHRPAFSRKKS GKSRLQFMTTTGDEVEDEVHSSNVNHQISLHNSSFSSFSPSVSCIGLFTHSVPIKCLLTGLLGCSPLMLHKFCIEDSSVT VLQHSVRTGWQIKRLNDTAHLRIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 36 | 36 | - | – | |
| PIRSF | 1 | 424 | 424 | 6.4E-194 | ||
| Coils | 7 | 31 | 25 | - | – | |
| MobiDBLite | 10 | 30 | 21 | - | – | |
| PANTHER | 118 | 281 | 164 | 6.8E-29 | – | |
| PANTHER | 118 | 281 | 164 | 6.8E-29 | – | |
| SUPERFAMILY | 118 | 421 | 304 | 2.88E-35 | ||
| SMART | 119 | 377 | 259 | 5.1E-10 | ||
| CDD | 119 | 205 | 87 | 1.25225E-15 | ||
| Pfam | 120 | 274 | 155 | 9.6E-25 | ||
| MobiDBLite | 283 | 324 | 42 | - | – | |
| MobiDBLite | 283 | 304 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0104000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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