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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0104700 |
| Transcript ID | LotjaGi2g1v0104700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aquaporin-like protein; TAIR: AT5G18290.1 Aquaporin-like superfamily protein; Swiss-Prot: sp|Q9FK43|SIP12_ARATH Probable aquaporin SIP1-2; TrEMBL-Plants: tr|I3S166|I3S166_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0104700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:35080788..35089378) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGTTTGTGCTTATCTGTTTAATTTGCCGATCGAGTTGAAGGACCACTTTATCTGTTATTGTCAGTCAAAAATGTGAT AGACATCATCCATGTTAGCATTTTCCGGCACAATTATCTCTACAAAACATGAGTCGTTTTAGGTGACTATCTCACATCGT TTGATCCGAAACCAAACCTCTATGCTTTGTGCTTTTCCCGTATTCTGATTCTTTATTTTTCTCTCTTGTTTCAAAAGCAA GAAGAAAACCCACCAAAAAAAAGAAACTTTCGTGCTTTGTAAACGCAGAGATCCTATAAGGGTTAGGAAAAGATGGTTAA TGCAGTAAAGGCAGCGATTGGAGATGCGGTGTTGACTTTCATGTGGGTCTTTTTCTCTGCCAACATTGGCTGGGTCGCCA ACGCCATAACCAGAGCGCTTGATGTTCATCATTTGTCTTACAATGGTCTTGATTACCCCAATATTATTCTCACCACTGTC ATCATCTTCGTCCTTGTCTCCATCTTCACCATCATTGGCAATGCATTGGGTGGTGCCAGCTTCAACCCCACCGGCAATGC TTCCTTCTATGCAGCTGGTGTTGGCTCAGACACCCTTTTCTCTATGGCTCTGCGTTTCCCTGCTCAGGTTTGTTACTTTT GTTTTTATGCCATAAAGGGTCTTTTCAGATGCTGATGGGAAAAAATTGCTTCCTGTCTCTTTTCTATCATGATTACTGGT TAGTGCATGCTTGGTTTAGCTTTGGAGAAGTATGTTTGGTTGAGCTTTTGAAGAAATAATTTTGGATAGAATTGATTATG TGTGTGTTCGGATGAGTGTTTGTCACAATTGATTTTGATAAAATTGATGATAGTAAAAGTGAAGTGATTTATGTTTGGAT ACCTGTATGAAAACAATGAGTTAGAATAGTGTTGTAAAATTCAGTTGTAAAATCTCACAATTGGTTATGTTCAACCGCTG CTGTTTCGAACTTCTACCAAAATTGATTTTAGGTCTGAAATCATCTATCCAAAATAACTTCCGAACATTGATATTTTCAT CCAGAATTGATTCTGAGGTTTCCCAAACCAAACACACTCACAAAATTGATTATGGTAAAAGTGAGTTGAAGGTGATGTGA TTTATGTTTGAATACATTTATTATAATCATGATTTTATGGGAACATGATAGAAATGTCTTGTGAGAAGAGCTGAAATCAC TTTCATGTTCTTTTTGCTTTGACCTCAAAGTGATATTGTCCGTCTCAATTTCTTCTAAGAATTTCACCAAACTTGTTTTA ATTATGAAACACTGTGTTTGAGAAGATTAGAAGTGCTTTTGCAGATGAGCAACACGAAACCCAACATGTTGTACTCATAA CAACCATGGTTGTGGCTGCAATATTGTATGTTTGAGAACCTCTGTAAGCCAAAATCACAGGGGATAGAAACAACTTCACT TAGATTTTGTGGCTTTCCGCTATGGTTTTGGCTTTACTGTTGATTTCCACAGTGTATTCAAACATGCACGAGTTTAGAAG CTTTTAAAGCCATGCATCAGCCATTTTCTTTATCTTGTGATTTGTGTTCTGTATTATTTTCATGGTGCTTGAGAGTTTTT ATAGACGTGAGTGAATTGAATGAGTGGTGTTAAACAGGCGCTAGGTGCAGTTGGCGGTGTTGTCGCAATTATGGAGGTGA TTCCACCAAAATATAGGCACATGATTGGAGGGCCTACTTTGAAGGTTGACTTGCATACAGGAGCCGTTGCAGAAGGGGTG TTGACATTTGCAATCACTTTTGCTGTTCTCTTCATCGTGCTCAGGGGTCCTCGTAGTGAGTTGATGAAGACTTGGTTGAT GGCGATGTCAACCGTAGCTTTGATCGTTGCCGGTTCGGCTTATACTGGACCAGCCATGAATCCTGCCTTTGTGAGTTGTT ATCAATATTTTTCTTCTCTGAATTGGTTTTGTTTGTTACCTGTACCGGTTTTAATTAACTACTATACATCTTCTTATCAT GAGGGCTGGGATGGAGCCAGAAAAAAAAGAATTAGGGGTGGAAATTTAACACGCTAAGTAAAATCAAGAACGACTAATTG AAAAAGACAGTATAAAAATTTTGAGGCTTGTGAATGCAGCATTTGAATACTACTTTATTAAGAAAAAAATTCTCTTGGAT GGCGGCTGCCCGGTTTCTACAGACTACAGTACCTTGTTCTGGCCCTGCATGAGGGTGGTCTGAATTCTCTTATCTTTTAA TTCCCTTTTCTGTAGCTTCTGATCTGCTTCTCATGTTTGAAACTTTTTGTTGTCAATATCAATCTCTTTTAGACTTCTGG AATTCTGAATTTGACCCTTTCCTCTTGCCTTAAGTTGGCTTTGAATCTTGAACCATGAAATACCATCCCTTTATCTTTTT GTCATGGTTCATTAGATAGATGGAATGGGTTATTTCTAAGGTGATGTTAATTTGATAGAAACCAGGGGCTGGGATATTTC TAAGGTGATGTTAATAATAAAGCAGCTATTTCTATTGTCTTCATGTTTATTTATTCATCTAAACAATCAATCTATTATAA CCTGAGTTGACTGTCGCATTTATTCCTGCTCGGCTGTAATTTTGTTTTCATCAAAATGCGATGCATATCATGCTGTATCT TCTTTCTCCTAAGTATCAATATTATTATATGTTACTATCAGGTGAAAGTAAACTGTAATGTGGAAATATGGTCAGTTTCT CATTAATTTTTACAATAACTGTGCAATATGTGTCGTAGGGTATTTATGTTAAATATTAGCTTGAAATCATGAAATCCATT TGTTTTTGAAGACAGAAAACCTACTAAATTACAGTTATTACTTATGACTTCGTGAAATATCTTCCTCGGGCAGTTAGCCT CAATTATTCCTCGCTCTGTCTATCAGTTTCTGAGATGAAGATTCAGGACCTAACTGTAAACGAGTTAAAGGTAGAGAAAT CTTAGCGTAAGTTATCTATTAGGGATGATAAAAGGAGGGAAAGGATGGTAATTTTCAGATCTTCTTCATGAGGAAAATTC TAATATAGTAATATCTACTTTTTGAGGATTGAGGTGCTCTTTCTTCCTTCCTCAGGATTGCTGATAGGGATGACTAAAGG TTCTTCTGTGTGTAAAATATGAGAGAGCAGGACAGATCTTAATGTTGTGTGAGAGAATGAAAGCAAATTAAAGATAAGGG CCAAAAGAAAGGACTTTAAAATAATTAATTAATAGAAACTGTAGCATACAATATTAACTCTTTTGCATGATTAGTCAAGT GAATCTTATTTCCTGTTTTGTTATCCGCTATGATTGATATTTTCCCCTTAGATGAAGTAACCGAAATTGATGAAAAGTTT TTATCAGTTCGCATCCCTTTTCCAATTTTGTAATTGCTAAATAATATATTGCTATGGAAAGTGCAGTTAGATACTTCTCT GCAGTGAAAACATGGAATGCTATCACGAGGGTAACACTGTAAGAGATTTAGATAAAATAGGATATGTTGATGAAATAGAA CACTGTCTCTCCTACATAAACCATATCTTTTAGTCGTTCTCTCCCCTGAATAGGGAGGAATAGGACAGCTTCGAAGTTGT TTGAAGTTACTACATGACTGATTAGTTTAAGATTTAGTGTCTTTAGTTCTATTTTTAGTTATTTTCGTATATGATTCCAG TATTTGTCTCACGTTAATCACCATTACCTCTGGCTCTAATCTAATGGAAAATCATTCTCCATTATAATTTGGCTCTGATT GCTCTTTCTCAACTATTAGAGCTCGGTTCAAATAACAATTTCTCATCCAGTACTTTAATGGGCAAATATGGATGGTGTTG TGGGTTTGAATCTACTCGGCATCGCACACTTATACCTATCCAATTTGATATGCTATCAATGATGGTAATATCAAGTATCA ACCTTCTTTTCCTTTTCTCTTTCTTTGCCTCTGCAGTACAGCGGGTATGAAAAATTATTAGTTTCTTACTCACCCTCATC TTGATTGCTTTTAAATAGACGCTCCTAGATGGGTTAATCTTGTCTTGCTTTGATTTGGTTATGATAAGTTGCTTGTGTGG TTGATCACTTTCCTGAAAATGGACTAGATGCTTCCTCTCTTCAACCAAAGGATTAAGTCAAAAGAACTAAAAACTTGGGA TAGCTGAACTTCCAGGCTTACTATGATGCTTTTTTGGCATCTCTGTTATAGAAGTGGTCAATCCCCCTTATGGATGTTCT AAGCTTTTTAGAAATGACCATATAGGGGCTAGGATTATATTTCATGCAATGTTGCTAATGGCAGACCATGGCGAAGAGCC AAAAACCCGCCATATTTGACAAATATAGTTATTGCGGATGGCGGGATATCGGCCATGATGAGAACCAAAAACCCTGATTT CATGATAGGCTGCTTTATTAAATTCGTGCAATGCTTATACAAACATTACTATTGTTTCTTTTTGCCTAGACGAGGTGGTG TTAGTCTAATAAAAACGTTAGGAGAACCATACCACAAAAGCTAGCTGTTGAAGTTGGAAAGCCTAAAGCCTAATAAACCC CACACTAGAATCTCATGCTTCCAATATGGGACTTAAGTTTCATACCTTGCAAGATCCAAGAGAAGCCTCTAGTTTGGAAG GTATGTTCTAGGAAGAGGAGGTCCTTGGGGCATGAAGTCGCAGAGAACGCAGAGGTGGAGCGATGGCTGGTGTGCTTGAT GCGCATGGAACCCAGAGGCAGGGCCTGGGGCTAATGGACCTATTTGACCATGGGCCTGGCTTTAGTCTTATCTAATATAG TTAGTTGGTCTTTTTAGGCCTGTTTGGCCGAGTCTGTCTTTATCAATTGAGTTGGGCTGTTTTGGGTTAGTCTTATTTCA TTAGTAAGGTTAGACTAGTATATGTAACCTTACTAATGAAATAAGACTAGTATATGTATTGACCAAAAAAAAAAAGACTA GTATATGTAAGGTTATAGTCTCTCGTATCTAATTGACTAACTAACTCTCTAATTGTCATTAGCAGTTATCTATCATAGTC ATAGATGTGATGACTAAATACTAGTTACTATCTTTAAAACATGGAGCAACTACTTATTATTCAATGATTTTCACAGTTCA CAACATGGAAACAAAAAAAGAAGGGCTAATGCCGGATGAATGGCATATGCTTTCAATTTTCAACTCTTCTACCCTTTATT TTGATTATGGTAGAAATATAAATAATGCAGAAACAAATTTATTGGCTTGAGGGAAAGCATCCTCCTAACATTGATTTTAA ATACTAAATAGTCAACATTAAGTGTTAGTCAATGCATTGTGGCATATTTCTTTGAAGATCCTGTAGCATATGTGGTTCTG GTGTGCAAATTACTTAATTCTTTTGGACCATATTTTCTTAGTGACTGATGTTAATGTCAGCTTCTTGGGGTGTTATTTTC AGGCTTTTGGCTGGGCTTACTTAAACAACTGGCACAACACCTGGGACCAGTTCTATGTTTACTGGATCTGCCCCTTCATT GGAGCAATACTGGCTTCTTGGCTGTTCCGTGTTGTGTTTCCCCCACCAGTGGTAAAACAGAAGAGAGCCTGAAGAGGAAT GGTAGACATGCTTCCTATGCAGCACCATTATAGTGCATTAATACCCGCTTTTGCTCCTTAATGTAGAATAGTAGACATGT GCTCCTTCTCTTCTTTTTTGGGTATACATATTTTTCTTAATTTTTAGTTTGGGTTAATCGCACTTTTGGTCCTACACGAA AGCTATATGTGCCATCGGGGTCCCTAAACTTCAAAATTCTCATTCCGCATCCCAACGTTAATCTCCATTAACAACTTTGG TCCCTCCCCTCCTTTCCGTCCAAAAACAAAGTTTTTGGCTTATGTGACGGTTTTTTTTTATGAGTTAGCATTCTTGTCGG AGAGAGAGTGAGCATGTGGCTAGCTATTTGTAAATTATGTGGAACCCAAATAGGAGAGAGAACCTCATATGTGGCTATTT GTAAATTCTATATATTTTTTTTTAGAAAAGAGAATATATATATATTATTAAATAAAGAAACATCCAAGAGAACAACCCTC TCAAGGTAGGGAAAATGAAAGGTAGAGTCTTCAACAGGAAAATAGAATAAAAGATAACCAAAAGAAAAAGACAAGAGACT AAAGACTAACTAGCAACAGAGCAAAAGAAAAGAAAACAAAATAAAAGAAGAACAAGGATGAGGCAAAAACCAAAACAGCT ACAGCACACGTGAGGAGAGGACTTGGACAACACCCCAAGGACCAAAAACTTAGGAGAAAGAGGGGCCAAGAACAACCTGG AGACAGCCACTAAAAGCAAACCTTTACCCCAGGAAAAATACTAACCCACGCAGCAAGCAAGGGTCAGTCTAAGGTCTACA AAGCCGCTGCAAAAATAACCAGAGACACGAACCCCATGGCGACAACATCATCTCCATCAATAGTGCAGAAAAACATAGCA ATACAAAACAGCACATATCAGATAGCATCTCAAGAGCACATATCAGATAACATCAATAGTACATCAGCTGCAAGGGAAAC AAAAACGATGCTCCCCAATGACCGCATATCAGATAGCATCTCAGCAGCACATCAAAGGCAGAGCATTCAAAATCAGTAAA TAGAAGCTGCAAAATGCAGAACCAGCTCCAAAACAACATGCCAGATTTTAGATTTTTAGACCAAGAGACCACATCAGTAT TTCCCCCAGATAGGAAAAAGTCTACGACATCCGGACTTAGCCAAGTGATCTGCCATAGTATTAGCTTCCCGATAGATATG GGACACTCCTAAACACTCCACTTCCGACATAAGCAGATCAATTTGTATTAGATCTTGGCACAACTTCCATGGCCTGTTAT GGACTGAGGCCACCCAACCTACCGCTATGGACGAATCAGATTCAATAAGTACGTTTCGGTAGTGAAACTGTTTACAGAAT AAGAGCGCCTTACGTATGGCTTTTACCTCCGCCTCGTAGGCCCAAAGAACACCAGCTGCTTCTGAGAACACTCCCAAGAT CTGCCTAGAAGAATTTCTTAGAACCCCACCAACACCACTCACCCCCGGATTGCCCAAAGAAGAGCCATCCACAATGAATT TAAGGACATTTTCCGGAGGGGGGAACCAGAAGGCAGAGCGAGGTGAATTAAAAGTGGGCCTAAGTGAAATTGCCGAAAAG TTTAGAAGGAAATCAGTCATGGAGTAGGAACAATCCTTTTGCCATGCTTTAATCCACCAAGCGATCCTTGAGATGTGCAT ATCCCATATGTTTTCAGTGGCAAACCTCGTATTTTGAAAGATGAGATTATTTCTGTCTAACCAAATACTCCAGCATAAAG AAAAGGGAATCAGCTCCCATAATACATGATCAGAGATGCCCCTCAAATGAGTCCATTACAATTAAAATAAAATGAAATAA ATAATTAAAAAATAAACACTTTAAAAATCTCTAAAATCCCTACTTAATTCAATTCACTCAGATCACTAAATTCACCCAGA TCTTCTTCACCTTCACTAGAATCTCAAAATAACCCAAAATTTCAAAATCTCTTAACTTCTCAAAATAAAAACACATAGAA TTTGATGAAACCCAGCAAATCAAAGATTTTTTCGGAAAAACATGGAAAACAGAATATTTTATTGAAGGATAAACATCACA GATACATGGAGAACAAAAAAGAACCAACAAGAAAAGGAACAGAATAAGGGCCAACAAACCAATAGCAGAGGATGAGTGGT GCGATACCTCCTCCTTCCCCAATCTAAGATCCATCGTCGTTGTCCTATTCGTTTCTGGCATCCACAGTCACCGCCACAAC CACCTCCTCTTCCAGAACCACTTAGGGCCGAACCTCACCGAGTCGGAGGCGATTGCGTCAGAGGTTGACCACCGTGTACG AAGGCCTCGATTGTGTGCTGCACCAAAACCGCTCCACCATCACCTTGCAAGAGATTTAAAACTTCTTGTCCTTCTTCGCC ACTGAGAGAGACGAGGGGTCGGTGATGAGATCTGAGAGAGAGAGGTGAGAGGTAAGAGATAGTGGACTGGCGAAGGAGAT GGCACACGTGAACCCCAAATAACCCAAGCCATAAACCACAACCCCAAAAGTCCAAATCCAGATCTGAAACCCTCTATGTT TGTTGTAACATCCCGAATTTCAGGTAGTCACAATAGTAACCGATTCTAAACTAAGTGCAGAAAATGCAAGTATTTTTTTT CTTTTTAAAGAAGGACTTGTCCAACAAGGACTTAATTCAAAACTTAAGACATAACCTGATATACCATATATATATATACA TGTACAACCCCTACTGTAACTATAAGTGTCACCAGTACCTGCAAGTGACAGAAGTATGCCCGAAGGCAAAATGTACGCAT CCAGTGATCAAGTGTAAGAGTTATAATTACAATTCTTCAAAGTGTGGGAGAATTAGCCCAAAACAGCCTCCTCAAGACCT CCTATCGTTCGACCACTCCCTGTGATTCTCATACAGAGAACCACCACACAAAAAGCAAAATGTCGGGAACCTACCGTGTC CCAAAATGTACAACTGACGAATCAGAGCTAC
CDS sequence (LotjaGi2g1v0104700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAATGCAGTAAAGGCAGCGATTGGAGATGCGGTGTTGACTTTCATGTGGGTCTTTTTCTCTGCCAACATTGGCTG GGTCGCCAACGCCATAACCAGAGCGCTTGATGTTCATCATTTGTCTTACAATGGTCTTGATTACCCCAATATTATTCTCA CCACTGTCATCATCTTCGTCCTTGTCTCCATCTTCACCATCATTGGCAATGCATTGGGTGGTGCCAGCTTCAACCCCACC GGCAATGCTTCCTTCTATGCAGCTGGTGTTGGCTCAGACACCCTTTTCTCTATGGCTCTGCGTTTCCCTGCTCAGGCGCT AGGTGCAGTTGGCGGTGTTGTCGCAATTATGGAGGTGATTCCACCAAAATATAGGCACATGATTGGAGGGCCTACTTTGA AGGTTGACTTGCATACAGGAGCCGTTGCAGAAGGGGTGTTGACATTTGCAATCACTTTTGCTGTTCTCTTCATCGTGCTC AGGGGTCCTCGTAGTGAGTTGATGAAGACTTGGTTGATGGCGATGTCAACCGTAGCTTTGATCGTTGCCGGTTCGGCTTA TACTGGACCAGCCATGAATCCTGCCTTTGCTTTTGGCTGGGCTTACTTAAACAACTGGCACAACACCTGGGACCAGTTCT ATGTTTACTGGATCTGCCCCTTCATTGGAGCAATACTGGCTTCTTGGCTGTTCCGTGTTGTGTTTCCCCCACCAGTGGTA AAACAGAAGAGAGCCTGA
Protein sequence (LotjaGi2g1v0104700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNAVKAAIGDAVLTFMWVFFSANIGWVANAITRALDVHHLSYNGLDYPNIILTTVIIFVLVSIFTIIGNALGGASFNPT GNASFYAAGVGSDTLFSMALRFPAQALGAVGGVVAIMEVIPPKYRHMIGGPTLKVDLHTGAVAEGVLTFAITFAVLFIVL RGPRSELMKTWLMAMSTVALIVAGSAYTGPAMNPAFAFGWAYLNNWHNTWDQFYVYWICPFIGAILASWLFRVVFPPPVV KQKRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 245 | 245 | 3.1E-29 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| SUPERFAMILY | 3 | 238 | 236 | 1.31E-34 | ||
| Pfam | 3 | 231 | 229 | 1.7E-15 | ||
| PANTHER | 3 | 243 | 241 | 3.1E-115 | – | |
| PANTHER | 3 | 243 | 241 | 3.1E-115 | – | |
| PRINTS | 6 | 25 | 20 | 1.7E-15 | ||
| Phobius | 12 | 32 | 21 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 33 | 51 | 19 | - | – | |
| Phobius | 52 | 77 | 26 | - | – | |
| TMHMM | 52 | 74 | 23 | - | – | |
| Phobius | 78 | 97 | 20 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| PRINTS | 97 | 116 | 20 | 1.7E-15 | ||
| Phobius | 98 | 120 | 23 | - | – | |
| Phobius | 121 | 139 | 19 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 140 | 160 | 21 | - | – | |
| PRINTS | 143 | 161 | 19 | 1.7E-15 | ||
| Phobius | 161 | 171 | 11 | - | – | |
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 172 | 193 | 22 | - | – | |
| PRINTS | 174 | 196 | 23 | 1.7E-15 | ||
| Phobius | 194 | 212 | 19 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| PRINTS | 214 | 234 | 21 | 1.7E-15 | ||
| Phobius | 236 | 245 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0104700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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