Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0118600 |
| Transcript ID | LotjaGi2g1v0118600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT4G16890.1 TIR-NBS-LRR class disease resistance protein; Swiss-Prot: sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1; TrEMBL-Plants: tr|K7MHM7|K7MHM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0118600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43469663..43478305) extracted from Lotus japonicus Gifu genome v1.2.
AGATGTTGATATCCTTAAAATTAATTAATTTTGAAAATTGCAAGTTCTTAACTGAATTGCCAAGCCTAAGTGCAGCATCA CTCCTGATGAATTTATGTCTTGATAACTGCACAAATTTAGTCAAAATTCATGACTCGATTGGGTTTCTTGAGAATCTATG CTCTTGGAGCGCTAAAGGATGCAACAAACTAGAAAATCTGGTGCCCTTCATCAAGTTGGCATCTCTTGAAATTCTGGATC TCCAGGGATGTTCATGTTTGAAGAAATTCCCGGAAGTATTGGGAAACATGGAGAAAATAAGAGAAATTAATTTAGACAAG ACTGCCATAGAGAAGTTACCATTTTCTATTGGAAATCTTATTGGGCTTGAACGATTGTCCCTCAAGGAATGCGAAAAGCG TGTTATTCAGATACCAGAGAGTATCTATACATTAACTAAAGTTGTGGTGGCTTTCAGCGACAGGCCTTGGGGCTGTAGAT ATTTTGAAGGGCACCAAGAGAATGAAAGGCTAAACTTAGAAGTATCACCTAATGCAATGCTAGTTTATCAAGGTGCTCGG CTAGGAATGAGTGATTTTACCACCTTTGATGTGTATTATTCGTTCATGAGCCCGAATAATGTCATCCAAGTATCTAGTCC CAATCCGCTAGTGCATCATGATTTTGAAATGTTGTTCCAAGAGCTTCCGATCAATTTCCTCAGCCGACACATGAAATCAT CAATGCGCTTCTCATTCCAAAAGAAATTCCCTAAGATCGCTCTATGTTTCCATGTAAGTCCCAACTCTACCAGAACCGGA AGCCTGATGTTGGATTTCAAGTTCAGCGTACTCATCAATGGCGCTAAACAGTTCAGTTCTTCATCTATCTACATAGCTTA TTCAACACGGGGCCTAACATTTTGGTGTGATCTACAAAGCAAAGGGGATGAGGTCTTTACAGAACACAAATGGAACGAAG TTGAAATTCAATGGGATTTGAACAAACTTAGATCAAATTCAAAAAGGGGAACAATGAACAATAACTGGGAGGCAACTGTA TGTTTATGCTGGACCCTGATCGGTCTCTACAAAAAAGGAAACAACAAGCAAAGAGTTAAATTCGAAAATCCCATGTCAGA TGTTCCATTGCCCTGCTGCTTCTATTACACTTTTAGACGTGATGGGTTATCTTTCCCCCATTTTTGGTAATGTTTCAATC ACTCCATTTTTTTTCAATTTCATTTCCATTTTATCTTTTATATCTATCATTCTCTTCTTTTCTTCTCATATTACTTATCA GATTTATCATTTATTTTTTCTATTCATATCTCTTTGTGGGTGCAGATCAATTTGGGGTGCTAACCAATTTTTTTTTTTTC TTTTCGTTTTGGTATATTTAGGGTCAATTTGTTTTACTGTTTGATAAAGTTAAATTTAAAAAATGATAGTTTTTTTTTTT AATATCAATACACCACATTATTAAACTGAGATAGAAGAAGTATCAACATAAGAGCTTGGGACACCCTTAAAAAGAGTTCA CCCCACCAAAAACCCCTAGGAAAATCATTAGCTAAAGAAGCTAAAATGTGGGCTGAGCAATTTGCCTTCCTAGAAACACG GAAAAAAATTATCTAACACTTTTCTTTCAGACATAACAGGTTCAATAGCAGATGGGCAGACTTCAGAACTCACAGCATTA TGGAGGATAAGTGAATCACTTTCAAACACAACTGAATCAACATGAAGTTGTTGTGTCGACATACACCATCCAAGATCTAG AACTTCTGCGACAATGGGATCAAATCTTCTATCTTCTAAGTGGGTAGCAGCACACATCAGCTCACCATCATGAGGCCGAG ACACATGACCAGAACCTGACCAACCCGCATCAACATTAAACTTGATGAACCCAGCTTGTGGTGGTTTCCAAACAGCATCA CTAGTGTGAGGGAGCAGCAGGATTATTACAACCAAAGTGCACTGCAACAAAGGAACCACCTGAATTGAGCAGTGTTAGAG CAAGAATTAGCCGCATACCAGTTCTGAAGGAAAAGGATTGCAACACTCAAGTTAAATGTTAGAAAAATAATAATAATATA CAACCTGGACGGTCCTGCCTATCTCAATTATGACCTGCCCAAACCTTTAAGAGGTAGGTGCTTCTTTTGATTTATTATCC TGAGAATGCACAACATTACTTTTAACATGAGTGGACTGAAGCTGAAGGGTAGTTGTTTGATGGGAGGGATATTTTTATTC CTTGCTTTCCTGATTAAACTAAATCATGATATGAATATTGTGCCTACTGGTGTAGATGGAGATTAATATTCGTTATCTTT ATTTGTAATAAATACAACTAAACAATTCTTTGCTATAACTTTTGTCTAATCTAAAATGAATTAGAAAACACTGTCTGGAT TTTATTTGTGTACTTGATGGAGCTCATGCGGAACCCTAGGATATAGTTGTTTTCAGTCCTTGTGAGTTGTGGGAGACGCA AAATATAGCGTTGACACCTCATTTCTTATACCACTAGCAATAACTTCGAGCTCAACATTTTGTCTCACGTATCATGTTCT ATTATTCTAAAAGATTCAACATCGACAAACAACATTGTTTCACAAAAATGACACAACCATTCAAAGAGATTCAACATCAA CATTTCAACACACAATCCAAAATTGAGTACTTGCAGAAAGGGTGGTGGATAATTACTACAAGCTCAGCAAAACCTGGGCA CAGGTACGAGCTTATATATTTTGCTAAAGCAGTTTATTTTCAGTCAATTCCTAGATGTGTACGAGTTTATTTTATTTTAT TAATTTGTTTGCTTTCAATTCCTAGATGTGTAGAGGAGCATAATTTTATTTTAGAGGAGCTTCTTCGTCAAACTTTATAA GTTAAGGTTAGGCTCTGACTTTCTCAAACTTATGTTTGTATCATATTTTAGAGGAGTCTTCAAGTTTGATTTCTTAATGG TCATTTTTAAACTTAATTCTTAATAATAGCTTCGTGTCAAAGTTTTTCCCAGCATTAACATAGTACCTATAGCTAGTTGG AGTCATCATATATGGAATAATTGTGTAATCCTCAAGCAACTCTTCTTCTTATTTTGATTTTTAGGGTGCTCAACATTGGG TATGGTTTCAACTTGGTTAAGCTTAACTGCAAAAAAGATTGTCTAAAGCATTGTTTTTCTCAGAAACTAGGATAAAAAAT TTCAACCTCCTTTACTCAACACCCTCTTTGAACCACCATAACTTCACTATCATCTCAGAATTCAACAAATGGAAGTTCAG CAACATCTGTAGCCTCCCACCCCTTGTGAACCAACTTTCACCTATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCACACACACACACACACACACACAAATCTCATTCCTCTTCCTGGTGTTTTGAAATATATTGGTTCTGCAAAGCTATTT TTACTGATTAATTGTATTTTAGCGGAAGAGAGTACCAATGTCTATATTGTATTCAGTTTATGTGATTCCTTAGTTCTTCA AATGAATATATGTTTGCTGTACCAATATATGTATATGGATGTTCAGCATCATTTTGGTGAAGGGAAATAGTCTTCAATAC CAATATATGTTCATTCCTATCTCTTACATTGTTGAAAGTTAAAATGAAGATATTGGTCCTTGGTTACATTGATAAAGCTA GTACTGTAATAAGACCAGCAAAACCTCCTATTAAGCATGTGTATGTGAGGCGCCATGCTGGCACTAGTGAGATTAACTAA CTGCAGTTTATAGTGTTAGAATAGTGAGGTTAACTAACTGCAGTTGGCAGTTAGTGTTAGAATGTGCTATAAATAAGGGG ATTTACTACTCAGTTAGGTATCATTCTGGTAGTTAAGGGTTGGTTGGGACTGATTATTGGAATTAGTTAGGGTTTCCTCT TCCAGATTGTAACTGTTTCATCTCTGTAATCTTTCCTTTCTCGAACCAGAATCTCCATTGTTACTGGCTGAGCTCTCTGT TGCAATTCAATAGCATTTCCTGTGAATTGAGGTTACCAGCTCTAACATACATGCTGGAGCATCTCAAAATTATGTATGAA ATTGAAGAATAAAAGCTCACTATTCAAGACCTCGAATTGGCACTCGTAAAACGTTGAAGGAAGGCAAAAAAAATGCAGAC AATTTGTGGAGGTTCAATCTTTTTGTAGGACCATGTTGGAGAAGATGATTAGAGACATAATGCACCAGTAACCCTCAAGA ATCTTCGCATCTTCTTACAGGACCTTCTGTTTTATGTTCACAAGAAGTATGGACAAAATATGATATAAAGCCCACAATCA GGACAATAACATCCTTGCAAAAGGAGCTAGAGGGTATTTTGAGGGGGAACAAAGGGCATCTGAAGTTGTCTTATCTGCAA ATGACGAGCAAAAGCTTGAGGAGCCGAGCATGTCAGCTAATACTTACACAGAAGAAAAGCTTGAGGAACATAGGGAGCAC ATGTTAGCTTGGATGAAAGTTCAACTGAACCAAGACTTCAGAAGCTAGAAAAGAATGAAAACAAGAGAAATTATGGTGCT TCATTCACTGGTCTTCATGGGTAAAACTGAGGAAGATGAAGAAACCAAGAAGCAACATGGCAGAGGGAATGTTGAGAAGG GGCTTCAAACGCTTTGGAGAGTAGAAAAGATGGAAGGGGTCCACAAGAAACTAATGAAAAAGCTTCTTGTGGGGGACTGA AGAAATAACCTGGAAATTGAATCAGAAGTACCAAGAAGAGATAAACAAATTAAGGGGGTTCCTCTCGGCCTTTGATATGC CTTTGAGGGTTTCCGCCTTGTTTGTACCTCTTCCTCGACGAAACTCTGAGATCCTCCCACCAAGTCTAAGAACCAATATG TTAGACTTGGAGCTTCCCCTGTATTTAATTTATAAAATGATTTAGGCCTGCTCTTGACGTTACTTTTCCGTTTTAACGTC GTCACTCATCTAACCAACAAGCTGAACAAAAGGCCAAGCTGTTAGAGTTAATGATCAAGATTACCCAACTAAGGTCAACA TCTAAAAGCCATTAACATAACAGCTTGTCAAAAACTCATCCTCTCAACAATTGCTCATTCCAACCTCTAAATAATATATA AATTTAGGTTTTGATCAATCTAAAAATTATACCTCTAACCATAAAAATGAACAAATGGCTAATAAGGCTAAGTGGTAAGA GTTAATGATCAAGATTATTGAAGGTCAAACATCTAAAAGCCACCAACATAACAGATTGGAAATATAGGTTTTATAAACTA ATGAAAATAATTGCTCCAGGATCCCATAATTTTTTTTCCCGAGTGGACAGCCATTGATTATTCCTCTCTCACAATAATGA TATTCTCCTCTGCCGTGTCCATTAATATTTGTCTAATAATATTGTCTAAGTCAACCGTGTGAACATTTCAAGACTACTTT ATCTGATAGTGTATACTACTATATAATTAAACTAAAGTTTGAATTTCATGATAGTTACTGATTGCTTACTTCGTTTGATT GATAATAATAAAAAAATGCAATTTGGAACCAAGGTATGAAACTTCTTGTTATTACTTTCGAACTACTTGCGACTAAATAC TTGGGAATTGCATATAGTACAAGTTGTCTAGCTGAGCTCTGTGTTCACAATCTTCAAGTTCGTGTATCATGGAAAAGGAA AGAGCAGAATCCTCATCTTCATTCAAACATAAGTTGACTTATGATGTCTTCCTCAGTTTTCGAGGTGTAGACACCAGGTT AAATTTCACTGGCCATCTCTATAATTCTCTACGCGAAAAGGGGATTCACGCGTTCATGGATGAAAAAGGGCTTAGAAGAG GGAAAGAAATTAAATCAGCTCTTCTCAACGCCATTCAAAATTCTAGAATTGCAATAGTCATTTTCTCTAAGAATTATGCA TCCTCCACATATTGTTTGGATGAACTTGTCGAGATTCTTAATCTTGTAAATGCAGAAAGTCTATTGGTAAGGCCCGTTTT TTATGATGTGGATCCTTCACAAGTTCGGCATCAAACTGGGACTTATGCAGAAGCCTTGGAGAAACATGAGAAAAGGTTCC GAAATAACAAGGGCAAGATACAAAAATGGAGAGCAGCTTTACATGAAATATCTGATCTGTCAGGCTGGCATTTCCAACTC GGGTAACTCACACTTTCCTTTCGTATGTATGTTTGTCTATGCTTTAATGTTTGCCAAATGGTTTTCATATTAAGAATAAT ATGTGTATGAAAAAAGAAATAAAAATTAGTGGAATTTACTTAATAGAGAAATCAATATTGTGTAATTAGTTTTGATTGAA GTGATTGAACTAAAGGAAATTCTACATTTTTCAATGGGCAGGTGTGAGTCAGAATACAAGTTTATTCAAAATATTGTTAA AGAGGTCTCAAAAGAGGTCACCCGCATTCCTTTGCATGTTGTTGAACACCCAATTGATCTAGATTTTGCAGTGCTTCAGG TGCGATCTCTCCTTGAACTTGGGTCTGAAGTGGTCATGGTAGGTATTTATGGATTTGGAGGACAAGGTAAAACAACAATT GCCCGTGCTGTGTATAACTTGATTGGTGACCAATTTGAAGGTGTGTGTTTTCTTGCTGACATTAGAGAAAGGACAATTAG TCAGAATGGCCTTGTACAACTCCAAGAAACTCTTCTTTCTGAAACACTTGGAGAGAAAGACATCAAAGTTGGAAATATCA ATCAAGGAATTCCAATAATCAAAAGGAGGCTCAAACAAATAAAGGTTCTTTTGGTTTTGGATGATGTTGATAAACCGGAA CAGTTAAAATCACTTGCAGGAGGAATTGATTGGTTTGGCAGTGGCAGTAAGATCATTATCACAACAAGAAACAAACAATT GCTAGATGCTCATGGAGTAGTAAGATTACACCGGGTTGAACTGTTGAGCGATCAAAAAGCTCTTGAGCTGTTTAGTTGGC ACGCCTTTAAAAGTCATGAAGTTCATCCTGATTATGTGAAAACTTCAAAGCGTGCAGTTTCTTATGCAGGTGGCCTTCCA TTAGCTTTAGAAGTGATAGGTTCTCACTTATGGGGTAAAAGTTTAGATGAATGTAACTCTGCATTGGATAAATATGAAAA AGTTCCTCGTGAAGATATGCATGAAATACTTAAAGTAAGCTTTGATGGTTTGGGGGAAGATGAGAAGGGTATTTTCCTTG ACATTGCTTGTTTATTCAACAATGATGAGATGGGGTATGTCAAAGAAATGTTACATGCTCATGGATTTCATGCAGAAGAT GGTCTTAGAGTATTAGTTGATAGATCTCTTATAAAGATTAAGAATGATAGTGATGTGGAAATGCATGACTTAATTCAAGA CATGGGTAGAGAAATTGTCAGACAAGAATCAATACATGAGCCCGGTGAACGTAGCAGATTGTGGTTCAATGAAGACATCA TTCATGTTTTGGAAAATAATACGGTATGTTAAAAATTATTATGTCTCTGCACGGTATTTTTCTTTCTTTTTCTTTGATTA TCATTTTTTCTTATAAATATATGTTGGATCTCAATATTCTTATTCCCCCTTTCTCAATTTCATGTTTGAAAAAATTTATT AGTGAGAAAATATTATAGTTTATATTTGTAAATTTTTTAAAATATGTATATGACATAGCTAATATGAACATTGTCATTTT GACCTTGGAAGGGAACAAATAAAGTTGAAGTCATAAAGCTTGGTTATTGCAAAAACAAAGTGCAGTGGAGTGGAAAAGCC TTCATGAAGATGAAAAACTTGAAAATTTTAATGGTTAGAGATGGTCCAAAGTTTTCAACATGCCCCAAACATTTACCAAA TAGTTTGAAGGTGCTACATTGGGCTAATTATCCATCGTGGTCTTTTCCGCCTGATTTCAACTATAAACAACTTAAGTGTC TAAGAGTGGAAAGAATCACGTATGTATACACCCGACATCCTGCTATTTATGACATGGTATGCAGGTTGTGGTTAGTTCTT CTTTTAAGCACATCCCAATTGCAGTGTAATCTCCAAATCCTATTTTGTGCTTTCTTGGAGCAGTGGAAGTGGTTGCTTTG TTCCCTGTTTCTCAGTTTCTTCCGGTGGAAGCAGCGAAATACGTTGCCTCCCTTCTGGCCCTTGTCACTGTTTCTTGGTT TTTTCCGGTGGAAGAGGTGGTTGCCCTCTTTTCAGGCGGAAGTAGAGCTTCGGCGGATAGAAGACATCTGTCAGCTGATT CTTATTAAAAACCTGCATCGAAGCATAAGAAAGTTTATTTTGAGAGGCCACCGGTTTGTGTACTTGTCGTCGCCTATTAC CATAAGCCTCCTTTTGGCAAAGGTGCTTGGCGTCCGGTTTGAAGACCTCTTGCTGCTGATTAGTATAAGCATCCTTTTGG TAAAAGTGCATCAAAGCCAGGTGCATCAAAGCCGTACTTACCCCATTGACCATGTGGTCTGGCATTGTGGAGAACATCAC AAGTAGTGAATTGGATCCCAATCTTTCACCTAAAATCTTAAGATCTTAGGTATATGGATTTTCTCACTTATAAATTGCTT AAAGTTGTCATTATCTTCTATTGTGAGATTTACTCACACTTTACATCACAACAAATTTGTATGCTCGTATATCTTTTTCT ACA
CDS sequence (LotjaGi2g1v0118600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGATATCCTTAAAATTAATTAATTTTGAAAATTGCAAGTTCTTAACTGAATTGCCAAGCCTAAGTGCAGCATCACT CCTGATGAATTTATGTCTTGATAACTGCACAAATTTAGTCAAAATTCATGACTCGATTGGGTTTCTTGAGAATCTATGCT CTTGGAGCGCTAAAGGATGCAACAAACTAGAAAATCTGGTGCCCTTCATCAAGTTGGCATCTCTTGAAATTCTGGATCTC CAGGGATGTTCATGTTTGAAGAAATTCCCGGAAGTATTGGGAAACATGGAGAAAATAAGAGAAATTAATTTAGACAAGAC TGCCATAGAGAAGTTACCATTTTCTATTGGAAATCTTATTGGGCTTGAACGATTGTCCCTCAAGGAATGCGAAAAGCGTG TTATTCAGATACCAGAGAGTATCTATACATTAACTAAAGTTGTGGTGGCTTTCAGCGACAGGCCTTGGGGCTGTAGATAT TTTGAAGGGCACCAAGAGAATGAAAGGCTAAACTTAGAAGTATCACCTAATGCAATGCTAGTTTATCAAGGTGCTCGGCT AGGAATGAGTGATTTTACCACCTTTGATGTGTATTATTCGTTCATGAGCCCGAATAATGTCATCCAAGTATCTAGTCCCA ATCCGCTAGTGCATCATGATTTTGAAATGTTGTTCCAAGAGCTTCCGATCAATTTCCTCAGCCGACACATGAAATCATCA ATGCGCTTCTCATTCCAAAAGAAATTCCCTAAGATCGCTCTATGTTTCCATGTAAGTCCCAACTCTACCAGAACCGGAAG CCTGATGTTGGATTTCAAGTTCAGCGTACTCATCAATGGCGCTAAACAGTTCAGTTCTTCATCTATCTACATAGCTTATT CAACACGGGGCCTAACATTTTGGTGTGATCTACAAAGCAAAGGGGATGAGGTCTTTACAGAACACAAATGGAACGAAGTT GAAATTCAATGGGATTTGAACAAACTTAGATCAAATTCAAAAAGGGGAACAATGAACAATAACTGGGAGGCAACTGTATG TTTATGCTGGACCCTGATCGGTCTCTACAAAAAAGGAAACAACAAGCAAAGAGTTAAATTCGAAAATCCCATGTCAGATG TTCCATTGCCCTGCTGCTTCTATTACACTTTTAGACGTGATGGGTTATCTTTCCCCCATTTTTGA
Protein sequence (LotjaGi2g1v0118600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLISLKLINFENCKFLTELPSLSAASLLMNLCLDNCTNLVKIHDSIGFLENLCSWSAKGCNKLENLVPFIKLASLEILDL QGCSCLKKFPEVLGNMEKIREINLDKTAIEKLPFSIGNLIGLERLSLKECEKRVIQIPESIYTLTKVVVAFSDRPWGCRY FEGHQENERLNLEVSPNAMLVYQGARLGMSDFTTFDVYYSFMSPNNVIQVSSPNPLVHHDFEMLFQELPINFLSRHMKSS MRFSFQKKFPKIALCFHVSPNSTRTGSLMLDFKFSVLINGAKQFSSSSIYIAYSTRGLTFWCDLQSKGDEVFTEHKWNEV EIQWDLNKLRSNSKRGTMNNNWEATVCLCWTLIGLYKKGNNKQRVKFENPMSDVPLPCCFYYTFRRDGLSFPHF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 162 | 162 | 5.3E-20 | ||
| SUPERFAMILY | 2 | 136 | 135 | 9.52E-18 | – | |
| PANTHER | 3 | 146 | 144 | 4.1E-31 | – | |
| PANTHER | 3 | 146 | 144 | 4.1E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0118600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…