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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0123900 |
| Transcript ID | LotjaGi2g1v0123900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Septum site-determining protein minD, putative; TAIR: AT5G24020.1 septum site-determining protein (MIND); Swiss-Prot: sp|Q9MBA2|MIND1_ARATH Putative septum site-determining protein minD homolog, chloroplastic; TrEMBL-Plants: tr|A0A0R0G2V0|A0A0R0G2V0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0123900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:45445755..45449497) extracted from Lotus japonicus Gifu genome v1.2.
CTGGTTCTCATTTTAGTTTTTGGTACATGGTCATTTTAGTTTACCATCTGCCATCATATTTCAAATATTTCCAAAAAAAA AAGTTAAAAAAATTAAATTTAAAAAAAAAATAAGAGAGAGCTAAGCCATCACCTTCGTGTACCTTTTTCTCAGTGGCCTC ACCCGGCCACTCTGCATCCCTCTTCCCACGCCATCAATTCCCCAATGCAGATATCGCTCCACCCTCTCCCCAATGCCAAC CTCTCATTTTCCCATTCTACCCTTCTCCACCACCCTTCATTCCCATTCACTCCCTCCAAATCCCTAATTCCAACCCCCAA ATCAAAACCCTATCCAACCAAAGCCCTCCTTCAATGGAACCGCAAGCCGCAACTCGCCGGCGAAACCCCGCGCGTGGTGG TCGTCACCTCCGGTAAAGGCGGCGTCGGAAAGACCACAACCACCGCCAACATGGGCCTCTCCCTCGCCCGCCTCGGCTTC TCGGTCGTCGCCATCGACGCCGATGTCGGCCTGCGCAACCTCGACCTCCTCCTCGGTCTCGAGAATCGCGTCAACTACAC CGTCATTGAGGTTCTCAACGGCGATTGCCGCCTCGACCAGGCACTCGTGCGTGACAAGCGCTGGTCCAATTTCGAGCTCC TCTGCATCTCCAAGCCCCGGTCCAAGCTCCCCATGGGGTTCGGCGGGAAAGCTCTCACCTGGCTTGTTGAAGCCCTCAAA GCGCGGCCTGAGGGCTCACCGGATTTCGTCCTCATTGACTGCCCTGCTGGGATTGACGCCGGTTTCATAACCGCCATAAC GCCGGCGAACGAGGCGGTTCTGATAACCACCCCGGACATCACGAGCTTGAGGGATGCTGATAGGGTCACCGGGCTGTTGG AGTGTGATGGCATTAGGGATATCAAGATGATTGTGAACCGGGTTCGGACCGATATGATCAAGGGGGAAGACATGATGTCT GTTCTGGATGTGCAGGAGATGCTGGGGTTGCCTTTGCTTGGGATGATACCGGAGGATTCAGAGGTAATAAGGAGTACCAA TAGAGGGTTCCCTCTGGTTTTGAACAAGCCTCCCACATTGGCTGGTTTGGCTTTTGAACAGGCTGCGTGGAGGCTCGTGG AGCAGGATACTATGCAGGCTGTCATGGTTGAGGAAGAGCCCAAGCGTGGTTTTTTCTCATTTTTCGGAGGCTAAGATTCG AATCCGTTCTTTTGTTTTAATGTTAGTTTTTGTGTGTGCAAAGCTTGTAATGGTTTTGTGCTGTTTGCGGTTATGCAAAT GACGAGTGCAATTGTTTGGAGGAGCAGTTTGTTTTTGTTTAGAAGGAAGCTGTGTACAGTAGGAGCTAGTGAAGCTTTGT TTTTGTAATTGATTCTGTTCATTCGAAGATTTCTTTTGGTCAGCACATTTGTTGTGTTAGTTTAATGATTAGTGCATGTT CACATTTTTTTGCTGTAAAATATTGCTATTAAAGGTTTTAAATGGAAGTTGTGATCGCAAATAATGTGGCCACAATTGCG GTTGATAATGAAGTTGTGGAGACTGTAATTGCACTCGCGGACCTAGCTTGATGCTATTGATGGTTCAATTCAGGGTTTCT GTGAAGTGCTATTGCAGGTGTGTAGGCATGTTGTGGCAGATGCAGTTATCATGCATTTTTGCTATTAATGCTTGATGTGG TTGCGCACTTGTGACTTCCACTGAACCGGGATGTATGCGATCTGCAATTCAATATCTTAGTTCAATCAAAGGTGAAGTTC AGCCTAAACTGTCAACCATACTGTGTTTTTTGATAAGTGTTTGGCATTTTGATGCTCTGTTGCCATGAAGACTTTTCCTT TGTTGTCAAGTTACACTGCAGTGCACATCTTAAATAACATTAAACTTTAGAAGTTGATTTTAGAGGATGTTGCATGCTTG ATGTTCTCTTCGTTTGTTTTGTAAATTTCTTCATTGAATGATGAACTTCCATTTGGGTTGGGTGAACAGGATAATTATAA ATGGAAGGGTAAACTTGCATTAATGTATAAGGTTGTGGAAGTGTTTTTGGCAGCAAATGATTGTTCCAGATGAAGGAAAC TATGAGCCAGATGGGGATATATTTTTCATCAAGCATTCATGGCAAAAACAAAAGAGTTAAAATGATCTTGCAATAAGTGT AAGTCTTCTAAATAGTTTCTTATACAAGTTGAAATTAGCTTTTTATGTCAACTTTTTCAACAGCTCCTTCATCTAGTTTA TGTATTAAGTAACTATAAACTTATAAGGACTGTTTCATAAGTTGAAATCAATTATGTATCTCAATTGACAAGCTCTCATA AGGATGAAGCTAATCCAAATTGGGCCTATATACAGTGCACTTCTAAAGTTCTAGATTTATTAATTCATTACATTTAGCAT TTCACTATCTCATTCATAGACTCATAGGCTTGTAAGATTAGTGTCTATACATAATCATATGGTTGACATCACGCCCCTAG GGTCACGTATGTTGCAAATACAGCAAGTAGTCGTGGTTGAATGATAAAATTTTCCGTAGTCTCTGTAACTTTGATTTCCC CCTCTTATGATTTTATGGAAGAATGGAAATGTCATCCTTTGTAGATTTAGTAATGTTTCCTGCTTGGAGTAAAGTTAAAC CATAAAATGGTAGTAAGCTTTCAAATTAATCTCCAAAGAATACTACAAATTGATTTTCACTGAATGAGCATAAAGCAGAG TGGTGGACAATTAAGCCATAAGTGATATGGCTCAGCATCCATTGTAGTTTGGTGTAAAACAAATAGAGCCCTGTAATATT TTATAGGTAAAGGTTGCATAATCCACTATTGAATTAAAAGCTCCGGTCCTCTCCACTCAAATCCCAAACTAATTTTTACT CTATTAGAATATCTGTGGACAACATGCTTTTCAAACCTAAGAAAGTATCAACTTTAGGATTAAACATGCAGGAATAACAT AACAAACTGGGTAATTTTATTGTGAAGAAAGTAGTTGATGGCTTCAACCATATTTTATTACCACCTCACTATATACTGAG CCACGTTTGAATTAATATATAGATTGTTGCATTGTGGGTTATGATTCGTTATTATTTTCAGCGTCCAGAGCTGTATTTCT ACCAGTTTATGATAGACATATATCCACTACTGGATCCTGATGATGTAACGTTTAGTTGAAACTTTGAGTGTGTTCTATTC CAGTTTATTACAGAAGAGCTATATGCTTATGTAAGACTTATGAACTGCCTGGCAAACATAGTTACTACTATAAAATTTGT TGATTCTTTTTTTCTTTTCGGTCAAAATGTGTTCATTCACCATTCATGTAACCAGCACTACGTAGTAGAAAAGACTGTTG ATTTGTTGCGTGTGATAGATATGTGTTGATTATGTGTGATAGACATAGTAACTACTATTAAATGTGTTGATTCCTACTGC TGCTTATATGATAGGTTGATATCTATTCGTTTTATTGTATCAATGTACAGGTTAGGATAATGTGTGCCAAGAGATTATTG TTGCTGATAGACACTTAAATGGATAAATTACTCCCATCGTTGACGATCTTCCAAAGCAAGATGCGAACCTGTTGAGCACC CTTCCATCGCCAAATAAGCCGCCAAATGGGATCGGGTTGCGCGAGAAAGAAATTATCCATGGCCAATTCGTATGCTGAAT TCGTGGAGTACAAACCAGAAGCAATTAAACCCCACACCAGCTTGTCTTGACCCGCATTCGCCG
CDS sequence (LotjaGi2g1v0123900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGATATCGCTCCACCCTCTCCCCAATGCCAACCTCTCATTTTCCCATTCTACCCTTCTCCACCACCCTTCATTCCC ATTCACTCCCTCCAAATCCCTAATTCCAACCCCCAAATCAAAACCCTATCCAACCAAAGCCCTCCTTCAATGGAACCGCA AGCCGCAACTCGCCGGCGAAACCCCGCGCGTGGTGGTCGTCACCTCCGGTAAAGGCGGCGTCGGAAAGACCACAACCACC GCCAACATGGGCCTCTCCCTCGCCCGCCTCGGCTTCTCGGTCGTCGCCATCGACGCCGATGTCGGCCTGCGCAACCTCGA CCTCCTCCTCGGTCTCGAGAATCGCGTCAACTACACCGTCATTGAGGTTCTCAACGGCGATTGCCGCCTCGACCAGGCAC TCGTGCGTGACAAGCGCTGGTCCAATTTCGAGCTCCTCTGCATCTCCAAGCCCCGGTCCAAGCTCCCCATGGGGTTCGGC GGGAAAGCTCTCACCTGGCTTGTTGAAGCCCTCAAAGCGCGGCCTGAGGGCTCACCGGATTTCGTCCTCATTGACTGCCC TGCTGGGATTGACGCCGGTTTCATAACCGCCATAACGCCGGCGAACGAGGCGGTTCTGATAACCACCCCGGACATCACGA GCTTGAGGGATGCTGATAGGGTCACCGGGCTGTTGGAGTGTGATGGCATTAGGGATATCAAGATGATTGTGAACCGGGTT CGGACCGATATGATCAAGGGGGAAGACATGATGTCTGTTCTGGATGTGCAGGAGATGCTGGGGTTGCCTTTGCTTGGGAT GATACCGGAGGATTCAGAGGTAATAAGGAGTACCAATAGAGGGTTCCCTCTGGTTTTGAACAAGCCTCCCACATTGGCTG GTTTGGCTTTTGAACAGGCTGCGTGGAGGCTCGTGGAGCAGGATACTATGCAGGCTGTCATGGTTGAGGAAGAGCCCAAG CGTGGTTTTTTCTCATTTTTCGGAGGCTAA
Protein sequence (LotjaGi2g1v0123900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQISLHPLPNANLSFSHSTLLHHPSFPFTPSKSLIPTPKSKPYPTKALLQWNRKPQLAGETPRVVVVTSGKGGVGKTTTT ANMGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVIEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGFG GKALTWLVEALKARPEGSPDFVLIDCPAGIDAGFITAITPANEAVLITTPDITSLRDADRVTGLLECDGIRDIKMIVNRV RTDMIKGEDMMSVLDVQEMLGLPLLGMIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDTMQAVMVEEEPK RGFFSFFGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 328 | 315 | 2.1E-125 | – | |
| PANTHER | 14 | 328 | 315 | 2.1E-125 | – | |
| Gene3D | 62 | 318 | 257 | 3.4E-58 | – | |
| SUPERFAMILY | 62 | 308 | 247 | 8.21E-53 | ||
| CDD | 63 | 304 | 242 | 1.08027E-125 | – | |
| TIGRFAM | 63 | 324 | 262 | 8.9E-96 | ||
| Pfam | 65 | 282 | 218 | 1.6E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi2g1v0123900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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